RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 CNN1P51911 297 aaKnown RBP13.83□□□□□ -0.2
SSB-201ENST00000260956 ERVFC1-1P60608 527 aa13.83□□□□□ -0.2
SSB-201ENST00000260956 LYZP61626 148 aa13.83□□□□□ -0.2
SSB-201ENST00000260956 GNG5P63218 68 aa13.83□□□□□ -0.2
SSB-201ENST00000260956 FAM120AOSQ5T036 256 aa13.83□□□□□ -0.2
SSB-201ENST00000260956 LEMD1Q68G75 181 aa13.83□□□□□ -0.2
SSB-201ENST00000260956 LINC01356Q8N9X3 169 aa13.83□□□□□ -0.2
SSB-201ENST00000260956 RBM14Q96PK6 669 aaKnown RBP13.83□□□□□ -0.2
SSB-201ENST00000260956 RASL11BQ9BPW5 248 aa13.83□□□□□ -0.2
SSB-201ENST00000260956 YAE1D1Q9NRH1 226 aa13.83□□□□□ -0.2
SSB-201ENST00000260956 SMIM27A0A1W2PRY6 76 aa13.82□□□□□ -0.2
SSB-201ENST00000260956 XKRY2A2RUG3 117 aa13.82□□□□□ -0.2
SSB-201ENST00000260956 AMBPP02760 352 aa13.82□□□□□ -0.2
SSB-201ENST00000260956 SAA4P35542 130 aa13.82□□□□□ -0.2
SSB-201ENST00000260956 RPEL1Q2QD12 228 aa13.82□□□□□ -0.2
SSB-201ENST00000260956 ZNF491Q8N8L2 437 aa13.82□□□□□ -0.2
SSB-201ENST00000260956 MLST8Q9BVC4 326 aa13.82□□□□□ -0.2
SSB-201ENST00000260956 ZNF586Q9NXT0 402 aa13.82□□□□□ -0.2
SSB-201ENST00000260956 PCP4L1A6NKN8 68 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 B4DSR2 109 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 MSMBP08118 114 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 RD3LP0DJH9 198 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 HIST1H1BP16401 226 aaKnown RBP13.81□□□□□ -0.2
SSB-201ENST00000260956 TMEM11P17152 192 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 RANP62826 216 aaKnown RBP13.81□□□□□ -0.2
SSB-201ENST00000260956 PDZD11Q5EBL8 140 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 PIP4P2Q8N4L2 257 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 C5orf17Q8NAS9 161 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 OR10D4PQ8NGN7 298 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 TRAV34A0A0B4J273 112 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 SNRPCP09234 159 aaKnown RBP13.81□□□□□ -0.2
SSB-201ENST00000260956 S100A2P29034 98 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 PAX8Q06710 450 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 DNLZQ5SXM8 178 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 CDPF1Q6NVV7 123 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 SMIM12Q96EX1 92 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 NIT2Q9NQR4 276 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 HIF1ANQ9NWT6 349 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 TRAPPC1Q9Y5R8 145 aa13.81□□□□□ -0.2
SSB-201ENST00000260956 IGLC2P0DOY2 106 aa13.8□□□□□ -0.2
SSB-201ENST00000260956 CBLN1P23435 193 aa13.8□□□□□ -0.2
SSB-201ENST00000260956 ADMP35318 185 aa13.8□□□□□ -0.2
SSB-201ENST00000260956 BLNKQ8WV28 456 aa13.8□□□□□ -0.2
SSB-201ENST00000260956 HSPB9Q9BQS6 159 aa13.8□□□□□ -0.2
SSB-201ENST00000260956 ATG101Q9BSB4 218 aa13.8□□□□□ -0.2
SSB-201ENST00000260956 Q9H3A6 140 aa13.8□□□□□ -0.2
SSB-201ENST00000260956 PGPA6NDG6 321 aa13.79□□□□□ -0.2
SSB-201ENST00000260956 AVPP01185 164 aa13.79□□□□□ -0.2
SSB-201ENST00000260956 FABP1P07148 127 aa13.79□□□□□ -0.2
SSB-201ENST00000260956 HIST1H1EP10412 219 aaKnown RBP13.79□□□□□ -0.2
SSB-201ENST00000260956 FCGR2BP31994 310 aaPredicted RBP13.79□□□□□ -0.2
SSB-201ENST00000260956 IBA57Q5T440 356 aaKnown RBP13.79□□□□□ -0.2
SSB-201ENST00000260956 OR8I2Q8N0Y5 310 aa13.79□□□□□ -0.2
SSB-201ENST00000260956 NHLRC2Q8NBF2 726 aa13.79□□□□□ -0.2
SSB-201ENST00000260956 TMEM190Q8WZ59 177 aa13.79□□□□□ -0.2
SSB-201ENST00000260956 OTORQ9NRC9 128 aa13.79□□□□□ -0.2
SSB-201ENST00000260956 GSN-AS1Q9NRJ2 163 aa13.79□□□□□ -0.2
SSB-201ENST00000260956 CENPVL3A0A0U1RRI6 287 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 NPFFO15130 113 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 NDUFB8O95169 186 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 TCRAP04437 139 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 SLC25A5P05141 298 aaKnown RBP13.78□□□□□ -0.2
SSB-201ENST00000260956 FABP4P15090 132 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 LINC00310P59036 64 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 USF2Q15853 346 aaPredicted RBP13.78□□□□□ -0.2
SSB-201ENST00000260956 IL17RELQ6ZVW7 336 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 BAGE2Q86Y30 109 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 BCL6BQ8N143 479 aaPredicted RBP13.78□□□□□ -0.2
SSB-201ENST00000260956 RNF125Q96EQ8 232 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 TP53TG3Q9ULZ0 132 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 TRAV30A0A087WSZ9 112 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 TRBV9A0A0B4J1U6 114 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 NCBP2LA6PVI3 153 aaKnown RBP13.78□□□□□ -0.2
SSB-201ENST00000260956 LTAP01374 205 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 IGLV2-11P01706 119 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 PACRGQ96M98 296 aaPredicted RBP13.78□□□□□ -0.2
SSB-201ENST00000260956 TMEM68Q96MH6 324 aa13.78□□□□□ -0.2
SSB-201ENST00000260956 C2CD3Q4AC94 2353 aa13.77□□□□□ -0.2
SSB-201ENST00000260956 TRBV6-1A0A0K0K1D8 114 aa13.77□□□□□ -0.21
SSB-201ENST00000260956 H3BTX0 84 aa13.77□□□□□ -0.21
SSB-201ENST00000260956 FAM106CPP0CH98 169 aa13.77□□□□□ -0.21
SSB-201ENST00000260956 MGST1P10620 155 aaKnown RBP13.77□□□□□ -0.21
SSB-201ENST00000260956 S4R3C0 116 aa13.77□□□□□ -0.21
SSB-201ENST00000260956 TRBV19A0A075B6N1 114 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 A0A1B0GUS0 222 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 MFAP4P55083 255 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 TMEM136Q6ZRR5 245 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 FAM110DQ8TAY7 271 aaPredicted RBP13.76□□□□□ -0.21
SSB-201ENST00000260956 GNB1LQ9BYB4 327 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 C21orf62Q9NYP8 219 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 C1RLQ9NZP8 487 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 SIGLEC15Q6ZMC9 328 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 GBGT1Q8N5D6 347 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 NUDT10Q8NFP7 164 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 NUDT11Q96G61 164 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 FMC1Q96HJ9 113 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 GPR82Q96P67 336 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 PRSS22Q9GZN4 317 aa13.76□□□□□ -0.21
SSB-201ENST00000260956 MRPL18Q9H0U6 180 aaKnown RBP13.76□□□□□ -0.21
SSB-201ENST00000260956 ZNF492Q9P255 531 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms