RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 KLRD1Q13241 179 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 BCL6BQ8N143 479 aaPredicted RBP12.88□□□□□ -0.35
SHTN1-201ENST00000260777 TRIOBPQ9H2D6 2365 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 RBMY1BA6NDE4 496 aaKnown RBP12.88□□□□□ -0.35
SHTN1-201ENST00000260777 RBMY1EA6NEQ0 496 aaKnown RBP12.88□□□□□ -0.35
SHTN1-201ENST00000260777 RBMY1DP0C7P1 496 aaKnown RBP12.88□□□□□ -0.35
SHTN1-201ENST00000260777 RBMY1A1P0DJD3 496 aaKnown RBP12.88□□□□□ -0.35
SHTN1-201ENST00000260777 RBMY1CP0DJD4 496 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 PRR31Q5SQ13 230 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 SHANK2-AS3Q9BTD1 123 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 MED12Q93074 2177 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 TRAV8-1A0A0A6YYK1 113 aa12.87□□□□□ -0.35
SHTN1-201ENST00000260777 PDE6HQ13956 83 aa12.87□□□□□ -0.35
SHTN1-201ENST00000260777 TRAV2A0A0B4J234 112 aa12.87□□□□□ -0.35
SHTN1-201ENST00000260777 FAM231BA6NCW3 169 aa12.87□□□□□ -0.35
SHTN1-201ENST00000260777 EFNA4P52798 201 aa12.87□□□□□ -0.35
SHTN1-201ENST00000260777 CD300EQ496F6 205 aaPredicted RBP12.87□□□□□ -0.35
SHTN1-201ENST00000260777 CD33P20138 364 aa12.87□□□□□ -0.35
SHTN1-201ENST00000260777 IL15RAQ13261 267 aa12.87□□□□□ -0.35
SHTN1-201ENST00000260777 UBE2V1Q13404 147 aa12.87□□□□□ -0.35
SHTN1-201ENST00000260777 TOMM7Q9P0U1 55 aa12.87□□□□□ -0.35
SHTN1-201ENST00000260777 TRGV2A0A075B6R0 118 aa12.87□□□□□ -0.35
SHTN1-201ENST00000260777 TRBV7-9A0A0J9YWB2 115 aa12.87□□□□□ -0.35
SHTN1-201ENST00000260777 RSPO1Q2MKA7 263 aaPredicted RBP12.87□□□□□ -0.35
SHTN1-201ENST00000260777 CT83Q5H943 113 aa12.87□□□□□ -0.35
SHTN1-201ENST00000260777 LINC00477Q96M19 166 aa12.87□□□□□ -0.35
SHTN1-201ENST00000260777 TRAV40A0A0B4J280 105 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 WIPF3A6NGB9 483 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 A8MWV9 139 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 PRB4P10163 310 aaPredicted RBP12.86□□□□□ -0.35
SHTN1-201ENST00000260777 KLF17Q5JT82 389 aaPredicted RBP12.86□□□□□ -0.35
SHTN1-201ENST00000260777 SFTA2Q6UW10 78 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 ESPL1Q14674 2120 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 A0A087X0K7 114 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 CACNA1EQ15878 2313 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 Q6ZS92 163 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 DPH3P1Q9H4G8 78 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 ICE1Q9Y2F5 2266 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 VOPP1Q96AW1 172 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 APC2O95996 2303 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 A0A1W2PPI3 338 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 LYPD2Q6UXB3 125 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 LINC00479Q96M42 142 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 ASXL3Q9C0F0 2248 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 EREGO14944 169 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 STHQ8IWL8 128 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 Q8TAT8 98 aa12.86□□□□□ -0.35
SHTN1-201ENST00000260777 IGHV4-39P01824 125 aa12.85□□□□□ -0.35
SHTN1-201ENST00000260777 GATA4P43694 442 aa12.85□□□□□ -0.35
SHTN1-201ENST00000260777 PAX2Q02962 417 aa12.85□□□□□ -0.35
SHTN1-201ENST00000260777 C3orf36Q3SXR2 165 aa12.85□□□□□ -0.35
SHTN1-201ENST00000260777 NDUFA4L2Q9NRX3 87 aa12.85□□□□□ -0.35
SHTN1-201ENST00000260777 RIPPLY3P57055 190 aa12.85□□□□□ -0.35
SHTN1-201ENST00000260777 LRRK1Q38SD2 2015 aa12.85□□□□□ -0.35
SHTN1-201ENST00000260777 YPEL3P61236 119 aaPredicted RBP12.85□□□□□ -0.35
SHTN1-201ENST00000260777 TMEM75Q8N9X5 138 aa12.85□□□□□ -0.35
SHTN1-201ENST00000260777 Q8TCH9 128 aa12.85□□□□□ -0.35
SHTN1-201ENST00000260777 SPOCK3Q9BQ16 436 aa12.85□□□□□ -0.35
SHTN1-201ENST00000260777 IGHV2-70P01814 119 aa12.85□□□□□ -0.35
SHTN1-201ENST00000260777 C18orf32Q8TCD1 76 aa12.85□□□□□ -0.35
SHTN1-201ENST00000260777 CD5LO43866 347 aa12.84□□□□□ -0.35
SHTN1-201ENST00000260777 TMEM238C9JI98 176 aa12.84□□□□□ -0.35
SHTN1-201ENST00000260777 WDR86Q86TI4 376 aa12.84□□□□□ -0.35
SHTN1-201ENST00000260777 LINC00527Q9UJ94 153 aa12.84□□□□□ -0.35
SHTN1-201ENST00000260777 LY6G6EA0A0G2JKS1 128 aa12.84□□□□□ -0.35
SHTN1-201ENST00000260777 U3KQA8 63 aa12.84□□□□□ -0.35
SHTN1-201ENST00000260777 AMN1Q8IY45 258 aa12.83□□□□□ -0.35
SHTN1-201ENST00000260777 ERG28Q9UKR5 140 aa12.83□□□□□ -0.35
SHTN1-201ENST00000260777 SMAD7O15105 426 aaKnown RBP12.83□□□□□ -0.36
SHTN1-201ENST00000260777 ZNF833PQ6ZTB9 187 aa12.83□□□□□ -0.36
SHTN1-201ENST00000260777 LYPD6BQ8NI32 183 aa12.83□□□□□ -0.36
SHTN1-201ENST00000260777 PHF3Q92576 2039 aaKnown RBP12.83□□□□□ -0.36
SHTN1-201ENST00000260777 TMEM158Q8WZ71 300 aa12.83□□□□□ -0.36
SHTN1-201ENST00000260777 RTTNQ86VV8 2226 aa12.83□□□□□ -0.36
SHTN1-201ENST00000260777 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.83□□□□□ -0.36
SHTN1-201ENST00000260777 FXYD7P58549 80 aa12.83□□□□□ -0.36
SHTN1-201ENST00000260777 CFAP161Q6P656 301 aa12.83□□□□□ -0.36
SHTN1-201ENST00000260777 CYYR1Q96J86 154 aa12.82□□□□□ -0.36
SHTN1-201ENST00000260777 TMEM8BA6NDV4 472 aa12.82□□□□□ -0.36
SHTN1-201ENST00000260777 TDGF1P13385 188 aa12.82□□□□□ -0.36
SHTN1-201ENST00000260777 TMEM155Q4W5P6 130 aa12.82□□□□□ -0.36
SHTN1-201ENST00000260777 Q6ZR03 302 aa12.82□□□□□ -0.36
SHTN1-201ENST00000260777 FAM231DQ6ZW35 169 aa12.82□□□□□ -0.36
SHTN1-201ENST00000260777 PLEKHB2Q96CS7 222 aa12.82□□□□□ -0.36
SHTN1-201ENST00000260777 FAM223BA6NKX1 122 aa12.82□□□□□ -0.36
SHTN1-201ENST00000260777 FAM223AQ8IWN6 122 aa12.82□□□□□ -0.36
SHTN1-201ENST00000260777 VCYO14598 125 aa12.82□□□□□ -0.36
SHTN1-201ENST00000260777 V9GYV3 84 aa12.82□□□□□ -0.36
SHTN1-201ENST00000260777 IGKV3D-20A0A0C4DH25 116 aa12.81□□□□□ -0.36
SHTN1-201ENST00000260777 SRD5A1P18405 259 aa12.81□□□□□ -0.36
SHTN1-201ENST00000260777 DSCR9P59020 149 aa12.81□□□□□ -0.36
SHTN1-201ENST00000260777 ARMS2P0C7Q2 107 aa12.81□□□□□ -0.36
SHTN1-201ENST00000260777 KIR3DS1Q14943 382 aa12.81□□□□□ -0.36
SHTN1-201ENST00000260777 HAPLN4Q86UW8 402 aa12.81□□□□□ -0.36
SHTN1-201ENST00000260777 USMG5Q96IX5 58 aa12.81□□□□□ -0.36
SHTN1-201ENST00000260777 A0A1B0GUS0 222 aa12.81□□□□□ -0.36
SHTN1-201ENST00000260777 TMEM219Q86XT9 240 aa12.81□□□□□ -0.36
SHTN1-201ENST00000260777 COX11Q9Y6N1 276 aa12.81□□□□□ -0.36
SHTN1-201ENST00000260777 TRAV8-4A0A0B4J246 113 aa12.81□□□□□ -0.36
SHTN1-201ENST00000260777 C17orf58Q2M2W7 97 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms