RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TMEM41BQ5BJD5 291 aa11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 AKR1C8PQ5T2L2 129 aa11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 FAM78BQ5VT40 261 aa11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 RPP25LQ8N5L8 163 aaKnown RBP11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 MARC2Q969Z3 335 aa11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 ZNF98A6NK75 572 aa11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 EIF3GO75821 320 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 MBP02144 154 aa11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 EIF5AL1Q6IS14 154 aaKnown RBP11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 MIR17HGQ75NE6 70 aa11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 PHYHIPLQ96FC7 376 aa11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 SLC25A22Q9H936 323 aa11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 SIGLEC8Q9NYZ4 499 aa11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 MLXQ9UH92 298 aa11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 TRAV5A0A0B4J249 113 aa11.96□□□□□ -0.5
CCDC90B-201ENST00000260054 A0A1W2PS18 150 aa11.96□□□□□ -0.5
CCDC90B-201ENST00000260054 SEC14L6B5MCN3 397 aa11.96□□□□□ -0.5
CCDC90B-201ENST00000260054 SAP30O75446 220 aa11.96□□□□□ -0.5
CCDC90B-201ENST00000260054 NARS2Q96I59 477 aaKnown RBP11.96□□□□□ -0.5
CCDC90B-201ENST00000260054 RNF2Q99496 336 aa11.96□□□□□ -0.5
CCDC90B-201ENST00000260054 FUT9Q9Y231 359 aa11.96□□□□□ -0.5
CCDC90B-201ENST00000260054 NOTCH3Q9UM47 2321 aa11.96□□□□□ -0.5
CCDC90B-201ENST00000260054 FHITP49789 147 aa11.95□□□□□ -0.5
CCDC90B-201ENST00000260054 FLI1Q01543 452 aaPredicted RBP11.95□□□□□ -0.5
CCDC90B-201ENST00000260054 FAM74A1Q5RGS3 127 aa11.95□□□□□ -0.5
CCDC90B-201ENST00000260054 C16orf54Q6UWD8 224 aa11.95□□□□□ -0.5
CCDC90B-201ENST00000260054 S100A7AQ86SG5 101 aa11.95□□□□□ -0.5
CCDC90B-201ENST00000260054 CLRN3Q8NCR9 226 aa11.95□□□□□ -0.5
CCDC90B-201ENST00000260054 GLMPQ8WWB7 406 aa11.95□□□□□ -0.5
CCDC90B-201ENST00000260054 MRPL32Q9BYC8 188 aaKnown RBP11.95□□□□□ -0.5
CCDC90B-201ENST00000260054 UMAD1C9J7I0 102 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 DNASE2O00115 360 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 CDC34P49427 236 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 RHOBP62745 196 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 ZNF726P1Q15940 193 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 UQCC3Q6UW78 93 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 SSX7Q7RTT5 188 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 A0A1W2PPV4 95 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 S100A7P31151 101 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 BMI1P35226 326 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 C1orf194Q5T5A4 169 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 OR8I2Q8N0Y5 310 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 DYNLRB2Q8TF09 96 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 GRAMD2BQ96HH9 432 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 FAM167A-AS1Q96KT0 104 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 SLC25A2Q9BXI2 301 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 TMEM231Q9H6L2 316 aa11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 TECRQ9NZ01 308 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-201ENST00000260054 PKD1L1Q8TDX9 2849 aa11.93□□□□□ -0.5
CCDC90B-201ENST00000260054 HMGB3O15347 200 aaKnown RBP11.93□□□□□ -0.5
CCDC90B-201ENST00000260054 APOC3P02656 99 aa11.93□□□□□ -0.5
CCDC90B-201ENST00000260054 IGLL1P15814 213 aa11.93□□□□□ -0.5
CCDC90B-201ENST00000260054 SULT1A2P50226 295 aa11.93□□□□□ -0.5
CCDC90B-201ENST00000260054 DEFB114Q30KQ6 69 aa11.93□□□□□ -0.5
CCDC90B-201ENST00000260054 PRR31Q5SQ13 230 aa11.93□□□□□ -0.5
CCDC90B-201ENST00000260054 FAM213BQ8TBF2 198 aa11.93□□□□□ -0.5
CCDC90B-201ENST00000260054 RAB24Q969Q5 203 aa11.93□□□□□ -0.5
CCDC90B-201ENST00000260054 TEX46H3BTG2 121 aa11.92□□□□□ -0.5
CCDC90B-201ENST00000260054 MRPS12O15235 138 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-201ENST00000260054 IGLV1-51P01701 117 aa11.92□□□□□ -0.5
CCDC90B-201ENST00000260054 CD300EQ496F6 205 aaPredicted RBP11.92□□□□□ -0.5
CCDC90B-201ENST00000260054 FAM90A2PQ658T7 463 aa11.92□□□□□ -0.5
CCDC90B-201ENST00000260054 TCF24Q7RTU0 167 aa11.92□□□□□ -0.5
CCDC90B-201ENST00000260054 MCRIP2Q9BUT9 160 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-201ENST00000260054 ACTR3CQ9C0K3 210 aaPredicted RBP11.92□□□□□ -0.5
CCDC90B-201ENST00000260054 RAB19A4D1S5 217 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 C9orf66Q5T8R8 295 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 SIGLEC15Q6ZMC9 328 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 TMEM61Q8N0U2 210 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 ZNF503Q96F45 646 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 NKX6-2Q9C056 277 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 SMAD5-AS1Q9Y6J3 95 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 CTXND1A0A1B0GTU2 59 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 H2AFB1P0C5Y9 115 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 PYYP10082 97 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 GP9P14770 177 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 RPL7P18124 248 aaKnown RBP11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 RAB5CP51148 216 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 INSL3P51460 131 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 DPPA3Q6W0C5 159 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 BPIFA4PQ86YQ2 179 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 C17orf77Q96MU5 243 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 RNF24Q9Y225 148 aa11.91□□□□□ -0.5
CCDC90B-201ENST00000260054 IGKV3-7A0A075B6H7 116 aa11.9□□□□□ -0.5
CCDC90B-201ENST00000260054 IZUMO1RA6ND01 250 aa11.9□□□□□ -0.5
CCDC90B-201ENST00000260054 SNRPCP09234 159 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-201ENST00000260054 STAG3L2P0CL84 134 aa11.9□□□□□ -0.5
CCDC90B-201ENST00000260054 STAG3L3P0CL85 134 aa11.9□□□□□ -0.5
CCDC90B-201ENST00000260054 TAS2R45P59539 299 aa11.9□□□□□ -0.5
CCDC90B-201ENST00000260054 RPL11P62913 178 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-201ENST00000260054 KHDC3LQ587J8 217 aa11.9□□□□□ -0.5
CCDC90B-201ENST00000260054 ATRAIDQ6UW56 229 aa11.9□□□□□ -0.5
CCDC90B-201ENST00000260054 LINC00518Q8N0U6 118 aa11.9□□□□□ -0.5
CCDC90B-201ENST00000260054 RNF141Q8WVD5 230 aa11.9□□□□□ -0.5
CCDC90B-201ENST00000260054 GPR82Q96P67 336 aa11.9□□□□□ -0.5
CCDC90B-201ENST00000260054 TMEM14CQ9P0S9 112 aa11.9□□□□□ -0.5
CCDC90B-201ENST00000260054 CMYA5Q8N3K9 4069 aa11.9□□□□□ -0.51
CCDC90B-201ENST00000260054 HELTA6NFD8 242 aa11.89□□□□□ -0.51
CCDC90B-201ENST00000260054 OR7C2O60412 319 aa11.89□□□□□ -0.51
CCDC90B-201ENST00000260054 GALR1P47211 349 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms