RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 FXYD5Q96DB9 178 aa12.89□□□□□ -0.35
HLA-F-216ENST00000259951 NBEAP1P0C6P0 100 aa12.88□□□□□ -0.35
HLA-F-216ENST00000259951 HIST1H1EP10412 219 aaKnown RBP12.88□□□□□ -0.35
HLA-F-216ENST00000259951 RPL7P18124 248 aaKnown RBP12.88□□□□□ -0.35
HLA-F-216ENST00000259951 CDX1P47902 265 aaPredicted RBP12.88□□□□□ -0.35
HLA-F-216ENST00000259951 CD81P60033 236 aa12.88□□□□□ -0.35
HLA-F-216ENST00000259951 FAM106AQ4KMX7 169 aa12.88□□□□□ -0.35
HLA-F-216ENST00000259951 C10orf91Q5T1B1 145 aa12.88□□□□□ -0.35
HLA-F-216ENST00000259951 LINC01006Q8NI28 216 aa12.88□□□□□ -0.35
HLA-F-216ENST00000259951 GPR82Q96P67 336 aa12.88□□□□□ -0.35
HLA-F-216ENST00000259951 OR5B12Q96R08 314 aa12.88□□□□□ -0.35
HLA-F-216ENST00000259951 C20orf24Q9BUV8 137 aa12.88□□□□□ -0.35
HLA-F-216ENST00000259951 CARHSP1Q9Y2V2 147 aaKnown RBP12.88□□□□□ -0.35
HLA-F-216ENST00000259951 C1orf194Q5T5A4 169 aa12.88□□□□□ -0.35
HLA-F-216ENST00000259951 GPHB5Q86YW7 130 aa12.88□□□□□ -0.35
HLA-F-216ENST00000259951 CYB561D1Q8N8Q1 229 aa12.88□□□□□ -0.35
HLA-F-216ENST00000259951 TMEM190Q8WZ59 177 aa12.88□□□□□ -0.35
HLA-F-216ENST00000259951 YTHDF2Q9Y5A9 579 aaKnown RBP12.88□□□□□ -0.35
HLA-F-216ENST00000259951 CRYBB3P26998 211 aa12.87□□□□□ -0.35
HLA-F-216ENST00000259951 CEBPGP53567 150 aa12.87□□□□□ -0.35
HLA-F-216ENST00000259951 RPEL1Q2QD12 228 aa12.87□□□□□ -0.35
HLA-F-216ENST00000259951 OR8I2Q8N0Y5 310 aa12.87□□□□□ -0.35
HLA-F-216ENST00000259951 WIPF2Q8TF74 440 aaPredicted RBP12.87□□□□□ -0.35
HLA-F-216ENST00000259951 IGHV3OR16-8A0A075B7F1 116 aa12.86□□□□□ -0.35
HLA-F-216ENST00000259951 CLPSL1A2RUU4 121 aa12.86□□□□□ -0.35
HLA-F-216ENST00000259951 APOC3P02656 99 aa12.86□□□□□ -0.35
HLA-F-216ENST00000259951 ADCYAP1P18509 176 aa12.86□□□□□ -0.35
HLA-F-216ENST00000259951 ATP5G3P48201 142 aa12.86□□□□□ -0.35
HLA-F-216ENST00000259951 BUB3O43684 328 aa12.85□□□□□ -0.35
HLA-F-216ENST00000259951 SVBPQ8N300 66 aa12.85□□□□□ -0.35
HLA-F-216ENST00000259951 BLNKQ8WV28 456 aa12.85□□□□□ -0.35
HLA-F-216ENST00000259951 C4orf3Q8WVX3 66 aa12.85□□□□□ -0.35
HLA-F-216ENST00000259951 TCEAL7Q9BRU2 100 aa12.85□□□□□ -0.35
HLA-F-216ENST00000259951 U3KQE9 123 aa12.85□□□□□ -0.35
HLA-F-216ENST00000259951 FN1P02751 2386 aaKnown RBP12.85□□□□□ -0.35
HLA-F-216ENST00000259951 A0A1W2PS18 150 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 ZNF320A2RRD8 509 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 K7EMT4 169 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 IGLC2P0DOY2 106 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 FAM74A3Q4VXF1 159 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 KHDC1LQ5JSQ8 128 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 GRAMD2BQ96HH9 432 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 UFC1Q9Y3C8 167 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 MRPS12O15235 138 aaKnown RBP12.84□□□□□ -0.35
HLA-F-216ENST00000259951 ATF4P18848 351 aaPredicted RBP12.84□□□□□ -0.35
HLA-F-216ENST00000259951 GALR1P47211 349 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 SUMO1P63165 101 aaKnown RBP12.84□□□□□ -0.35
HLA-F-216ENST00000259951 PDE6HQ13956 83 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 TCTEX1D4Q5JR98 221 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 UNQ9165/PRO28630Q6UXU0 137 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 DAZ1Q9NQZ3 744 aaKnown RBP12.84□□□□□ -0.35
HLA-F-216ENST00000259951 ZNF586Q9NXT0 402 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 RNF114Q9Y508 228 aa12.84□□□□□ -0.35
HLA-F-216ENST00000259951 TRBV19A0A075B6N1 114 aa12.83□□□□□ -0.36
HLA-F-216ENST00000259951 ZNF207O43670 478 aaKnown RBP12.83□□□□□ -0.36
HLA-F-216ENST00000259951 BMI1P35226 326 aa12.83□□□□□ -0.36
HLA-F-216ENST00000259951 RANP62826 216 aaKnown RBP12.83□□□□□ -0.36
HLA-F-216ENST00000259951 FAM90A2PQ658T7 463 aa12.83□□□□□ -0.36
HLA-F-216ENST00000259951 LYPD1Q8N2G4 141 aa12.83□□□□□ -0.36
HLA-F-216ENST00000259951 NIPSNAP3BQ9BS92 247 aa12.83□□□□□ -0.36
HLA-F-216ENST00000259951 ANK3Q12955 4377 aaKnown RBP12.82□□□□□ -0.36
HLA-F-216ENST00000259951 A0A1B0GUS0 222 aa12.82□□□□□ -0.36
HLA-F-216ENST00000259951 GGTLC3B5MD39 225 aa12.82□□□□□ -0.36
HLA-F-216ENST00000259951 H3BQ15 152 aa12.82□□□□□ -0.36
HLA-F-216ENST00000259951 MEOX2P50222 304 aa12.82□□□□□ -0.36
HLA-F-216ENST00000259951 DPF1Q92782 380 aa12.82□□□□□ -0.36
HLA-F-216ENST00000259951 C11orf52Q96A22 123 aa12.82□□□□□ -0.36
HLA-F-216ENST00000259951 RPUSD4Q96CM3 377 aaKnown RBP12.82□□□□□ -0.36
HLA-F-216ENST00000259951 ELOVL1Q9BW60 279 aa12.82□□□□□ -0.36
HLA-F-216ENST00000259951 JMJD1CQ15652 2540 aa12.81□□□□□ -0.36
HLA-F-216ENST00000259951 IGHV4OR15-8A0A075B7B6 117 aa12.81□□□□□ -0.36
HLA-F-216ENST00000259951 A0A087WW49 117 aa12.81□□□□□ -0.36
HLA-F-216ENST00000259951 ZNF727A8MUV8 499 aa12.81□□□□□ -0.36
HLA-F-216ENST00000259951 HAX1O00165 279 aa12.81□□□□□ -0.36
HLA-F-216ENST00000259951 LGALS9O00182 355 aa12.81□□□□□ -0.36
HLA-F-216ENST00000259951 SNAPINO95295 136 aa12.81□□□□□ -0.36
HLA-F-216ENST00000259951 REC114Q7Z4M0 266 aa12.81□□□□□ -0.36
HLA-F-216ENST00000259951 KLHL30-AS1Q8NEE0 82 aa12.81□□□□□ -0.36
HLA-F-216ENST00000259951 SMIM7Q9BQ49 75 aa12.81□□□□□ -0.36
HLA-F-216ENST00000259951 PARLQ9H300 379 aa12.81□□□□□ -0.36
HLA-F-216ENST00000259951 Q9H3A6 140 aa12.81□□□□□ -0.36
HLA-F-216ENST00000259951 OTORQ9NRC9 128 aa12.81□□□□□ -0.36
HLA-F-216ENST00000259951 TSSC4Q9Y5U2 329 aaPredicted RBP12.81□□□□□ -0.36
HLA-F-216ENST00000259951 PGPA6NDG6 321 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 ZNF785A8K8V0 405 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 LINC01619G3V211 115 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 ZNF253O75346 499 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 MYCNOSP40205 109 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 PROK1P58294 105 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 PSG9Q00887 426 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 C16orf54Q6UWD8 224 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 C1QL4Q86Z23 238 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 A0A087X0K7 114 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 IGHV7-4-1A0A0J9YVY3 117 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 SCO2A0A1W2PP80 73 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 NDUFB4O95168 129 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 APOHP02749 345 aaPredicted RBP12.8□□□□□ -0.36
HLA-F-216ENST00000259951 SNRPCP09234 159 aaKnown RBP12.8□□□□□ -0.36
HLA-F-216ENST00000259951 CD28P10747 220 aa12.8□□□□□ -0.36
HLA-F-216ENST00000259951 HOXD3P31249 432 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms