RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 MUC15Q8N387 334 aa12.08□□□□□ -0.48
DDX56-201ENST00000258772 VKORC1Q9BQB6 163 aa12.08□□□□□ -0.48
DDX56-201ENST00000258772 TRAV9-2A0A087WT02 112 aa12.07□□□□□ -0.48
DDX56-201ENST00000258772 CNIH1O95406 144 aa12.07□□□□□ -0.48
DDX56-201ENST00000258772 HOXB4P17483 251 aaPredicted RBP12.07□□□□□ -0.48
DDX56-201ENST00000258772 TFPI2P48307 235 aa12.07□□□□□ -0.48
DDX56-201ENST00000258772 LDLRAD2Q5SZI1 272 aa12.07□□□□□ -0.48
DDX56-201ENST00000258772 PRNTQ86SH4 94 aa12.07□□□□□ -0.48
DDX56-201ENST00000258772 KIR3DL3Q8N743 410 aa12.07□□□□□ -0.48
DDX56-201ENST00000258772 SRSF8Q9BRL6 282 aaKnown RBP12.07□□□□□ -0.48
DDX56-201ENST00000258772 ARHGAP32A7KAX9 2087 aa12.07□□□□□ -0.48
DDX56-201ENST00000258772 ABCA4P78363 2273 aa12.07□□□□□ -0.48
DDX56-201ENST00000258772 K7EIM0 57 aa12.06□□□□□ -0.48
DDX56-201ENST00000258772 TOX4O94842 621 aa12.06□□□□□ -0.48
DDX56-201ENST00000258772 LAMTOR2Q9Y2Q5 125 aa12.06□□□□□ -0.48
DDX56-201ENST00000258772 GOLT1BQ9Y3E0 138 aa12.06□□□□□ -0.48
DDX56-201ENST00000258772 TIMM23O14925 209 aa12.06□□□□□ -0.48
DDX56-201ENST00000258772 Q71RC1 249 aaPredicted RBP12.06□□□□□ -0.48
DDX56-201ENST00000258772 SCNM1Q9BWG6 230 aa12.06□□□□□ -0.48
DDX56-201ENST00000258772 CLEC5AQ9NY25 188 aa12.06□□□□□ -0.48
DDX56-201ENST00000258772 SH2D7A6NKC9 451 aaPredicted RBP12.05□□□□□ -0.48
DDX56-201ENST00000258772 M0QZ24 198 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 ZNF672Q499Z4 452 aaPredicted RBP12.05□□□□□ -0.48
DDX56-201ENST00000258772 FAM120AOSQ5T036 256 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 BPIFA4PQ86YQ2 179 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 STPG4Q8N801 248 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 C17orf77Q96MU5 243 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 NDFIP1Q9BT67 221 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 SHANK2-AS3Q9BTD1 123 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 TMEM70Q9BUB7 260 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 ONECUT1Q9UBC0 465 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 PTPRZ1P23471 2315 aaPredicted RBP12.05□□□□□ -0.48
DDX56-201ENST00000258772 TRBV19A0A075B6N1 114 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 TRBV6-1A0A0K0K1D8 114 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 ZNF785A8K8V0 405 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 CHEK1O14757 476 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 APOHP02749 345 aaPredicted RBP12.05□□□□□ -0.48
DDX56-201ENST00000258772 NPSP0C0P6 89 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 C21orf62-AS1Q17RA5 79 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 SPATA12Q7Z6I5 190 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 CHCHD1Q96BP2 118 aaKnown RBP12.05□□□□□ -0.48
DDX56-201ENST00000258772 ZZEF1O43149 2961 aa12.05□□□□□ -0.48
DDX56-201ENST00000258772 LOC102724200A0A096LPH7 203 aaPredicted RBP12.04□□□□□ -0.48
DDX56-201ENST00000258772 C20orf202A1L168 122 aa12.04□□□□□ -0.48
DDX56-201ENST00000258772 HAX1O00165 279 aa12.04□□□□□ -0.48
DDX56-201ENST00000258772 LIPFP07098 398 aa12.04□□□□□ -0.48
DDX56-201ENST00000258772 TSPOP30536 169 aa12.04□□□□□ -0.48
DDX56-201ENST00000258772 LY6G5BQ8NDX9 201 aa12.04□□□□□ -0.48
DDX56-201ENST00000258772 RNF24Q9Y225 148 aa12.04□□□□□ -0.48
DDX56-201ENST00000258772 H3BRN7 92 aa12.04□□□□□ -0.48
DDX56-201ENST00000258772 OVOL3O00110 214 aa12.04□□□□□ -0.48
DDX56-201ENST00000258772 SIAH2O43255 324 aa12.04□□□□□ -0.48
DDX56-201ENST00000258772 LINC00614P0C842 121 aa12.04□□□□□ -0.48
DDX56-201ENST00000258772 IGLL1P15814 213 aa12.04□□□□□ -0.48
DDX56-201ENST00000258772 ZNF491Q8N8L2 437 aa12.04□□□□□ -0.48
DDX56-201ENST00000258772 OR4F17Q8NGA8 305 aa12.04□□□□□ -0.48
DDX56-201ENST00000258772 MRPS16Q9Y3D3 137 aaKnown RBP12.04□□□□□ -0.48
DDX56-201ENST00000258772 TLN1Q9Y490 2541 aaKnown RBP12.03□□□□□ -0.48
DDX56-201ENST00000258772 CRXO43186 299 aaPredicted RBP12.03□□□□□ -0.48
DDX56-201ENST00000258772 HTR1DP28221 377 aa12.03□□□□□ -0.48
DDX56-201ENST00000258772 TMEM75Q8N9X5 138 aa12.03□□□□□ -0.48
DDX56-201ENST00000258772 ZFP30Q9Y2G7 519 aa12.03□□□□□ -0.48
DDX56-201ENST00000258772 IGHV1-24A0A0C4DH33 117 aa12.03□□□□□ -0.48
DDX56-201ENST00000258772 J3KRW8 73 aa12.03□□□□□ -0.48
DDX56-201ENST00000258772 NBR2O15453 112 aa12.03□□□□□ -0.48
DDX56-201ENST00000258772 SIGLEC15Q6ZMC9 328 aa12.03□□□□□ -0.48
DDX56-201ENST00000258772 TMEM190Q8WZ59 177 aa12.03□□□□□ -0.48
DDX56-201ENST00000258772 RNF125Q96EQ8 232 aa12.03□□□□□ -0.48
DDX56-201ENST00000258772 ZC2HC1AQ96GY0 325 aa12.03□□□□□ -0.48
DDX56-201ENST00000258772 DPM3Q9P2X0 92 aa12.03□□□□□ -0.48
DDX56-201ENST00000258772 GRNP28799 593 aaKnown RBP12.02□□□□□ -0.49
DDX56-201ENST00000258772 NBL1P41271 181 aa12.02□□□□□ -0.49
DDX56-201ENST00000258772 ARF6P62330 175 aa12.02□□□□□ -0.49
DDX56-201ENST00000258772 LYPD1Q8N2G4 141 aa12.02□□□□□ -0.49
DDX56-201ENST00000258772 C1RLQ9NZP8 487 aa12.02□□□□□ -0.49
DDX56-201ENST00000258772 HILPDAQ9Y5L2 63 aa12.02□□□□□ -0.49
DDX56-201ENST00000258772 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.02□□□□□ -0.49
DDX56-201ENST00000258772 K7ENP7 123 aa12.02□□□□□ -0.49
DDX56-201ENST00000258772 LEPROTL1O95214 131 aa12.02□□□□□ -0.49
DDX56-201ENST00000258772 IL4P05112 153 aa12.02□□□□□ -0.49
DDX56-201ENST00000258772 LINC00173Q6ZV60 143 aa12.02□□□□□ -0.49
DDX56-201ENST00000258772 CFHR4Q92496 578 aa12.02□□□□□ -0.49
DDX56-201ENST00000258772 FAM90A27PA6NNH2 459 aa12.01□□□□□ -0.49
DDX56-201ENST00000258772 MRPS12O15235 138 aaKnown RBP12.01□□□□□ -0.49
DDX56-201ENST00000258772 HLA-DRB1P01911 266 aa12.01□□□□□ -0.49
DDX56-201ENST00000258772 KLF17Q5JT82 389 aaPredicted RBP12.01□□□□□ -0.49
DDX56-201ENST00000258772 NPBQ8NG41 125 aa12.01□□□□□ -0.49
DDX56-201ENST00000258772 OR11H6Q8NGC7 330 aa12.01□□□□□ -0.49
DDX56-201ENST00000258772 ZNF414Q96IQ9 312 aa12.01□□□□□ -0.49
DDX56-201ENST00000258772 ASCL2Q99929 193 aa12.01□□□□□ -0.49
DDX56-201ENST00000258772 PSG8Q9UQ74 426 aa12.01□□□□□ -0.49
DDX56-201ENST00000258772 ANKHD1Q8IWZ3 2542 aaKnown RBP12.01□□□□□ -0.49
DDX56-201ENST00000258772 TACC2O95359 2948 aa12.01□□□□□ -0.49
DDX56-201ENST00000258772 A0A1B0GUT8 65 aa12□□□□□ -0.49
DDX56-201ENST00000258772 WI2-2373I1.2A0A1W2PRP0 233 aa12□□□□□ -0.49
DDX56-201ENST00000258772 SYS1-DBNDD2H3BUS1 97 aa12□□□□□ -0.49
DDX56-201ENST00000258772 K7EQM0 130 aa12□□□□□ -0.49
DDX56-201ENST00000258772 NDUFB8O95169 186 aa12□□□□□ -0.49
DDX56-201ENST00000258772 FCGR2BP31994 310 aaPredicted RBP12□□□□□ -0.49
DDX56-201ENST00000258772 PSG3Q16557 428 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms