RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 TIMM8BQ9Y5J9 83 aaPredicted RBP6.15□□□□□ -1.43
GPNMB-201ENST00000258733 RALGAPA1Q6GYQ0 2036 aa6.15□□□□□ -1.43
GPNMB-201ENST00000258733 PLXNA2O75051 1894 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 SMIM27A0A1W2PRY6 76 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 MYBPHLA2RUH7 354 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 C9JCJ5 164 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 LGALS9BQ3B8N2 356 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 LGALS9CQ6DKI2 356 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 ZFP2Q6ZN57 461 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 FOXC2Q99958 501 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 RNF7Q9UBF6 113 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 TIMM9Q9Y5J7 89 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 MDC1Q14676 2089 aaKnown RBP6.14□□□□□ -1.43
GPNMB-201ENST00000258733 EPM2AB3EWF7 344 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 HOXA3O43365 443 aaPredicted RBP6.14□□□□□ -1.43
GPNMB-201ENST00000258733 PIRTP0C851 137 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 LMO2P25791 158 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 UBE2D3P61077 147 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 UBE2D2P62837 147 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 C1orf140Q5VVS0 124 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 PIP4P2Q8N4L2 257 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 DRAM1Q8N682 238 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 PIFOQ8TCI5 191 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 OSTCQ9NRP0 149 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 EML6Q6ZMW3 1958 aa6.14□□□□□ -1.43
GPNMB-201ENST00000258733 CUL9Q8IWT3 2517 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 MYMXA0A1B0GTQ4 84 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 SCO2A0A1W2PP80 73 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 SLC25A20O43772 301 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 CISD3P0C7P0 127 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 VSIG8P0DPA2 414 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 CRYGSP22914 178 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 NPC2P61916 151 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 WDR38Q5JTN6 314 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 LINC00596Q86U02 117 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 PFN4Q8NHR9 129 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 NCBP2LA6PVI3 153 aaKnown RBP6.13□□□□□ -1.43
GPNMB-201ENST00000258733 H3BP45 60 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 CCL21O00585 134 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 ZNF883P0CG24 379 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 P0DMU3 169 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 FAM231AP0DMU4 169 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 FAM231CP0DMU5 169 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 QRFPP83859 136 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 LY6KQ17RY6 165 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 GDF5OSQ5U4N7 250 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 PLPP4Q5VZY2 271 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 PLXDC1Q8IUK5 500 aa6.13□□□□□ -1.43
GPNMB-201ENST00000258733 TAF15Q92804 592 aaKnown RBP eCLIP6.13□□□□□ -1.43
GPNMB-201ENST00000258733 C19orf25Q9UFG5 118 aaPredicted RBP6.13□□□□□ -1.43
GPNMB-201ENST00000258733 PGPA6NDG6 321 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 H3BT86 120 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 EMDP50402 254 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 MFAP2P55001 183 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 FXYD3Q14802 87 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 C9orf57Q5W0N0 161 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 C11orf53Q8IXP5 236 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 RNF182Q8N6D2 247 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 NTN5Q8WTR8 489 aaPredicted RBP6.12□□□□□ -1.43
GPNMB-201ENST00000258733 FOXB1Q99853 325 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 U3KQE9 123 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 PCNTO95613 3336 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 ATOX1O00244 68 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 IGLV3-25P01717 112 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 SLC25A16P16260 332 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 LOXL1Q08397 574 aaPredicted RBP6.12□□□□□ -1.43
GPNMB-201ENST00000258733 Q71RC1 249 aaPredicted RBP6.12□□□□□ -1.43
GPNMB-201ENST00000258733 VKORC1L1Q8N0U8 176 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 SRSF12Q8WXF0 261 aaKnown RBP6.12□□□□□ -1.43
GPNMB-201ENST00000258733 CYYR1Q96J86 154 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 RPP25Q9BUL9 199 aaKnown RBP6.12□□□□□ -1.43
GPNMB-201ENST00000258733 FAM240AA0A1B0GVK7 77 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 LGALS9O00182 355 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 NPYP01303 97 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 HBG1P69891 147 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 HBG2P69892 147 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 DAZ2Q13117 558 aaKnown RBP6.12□□□□□ -1.43
GPNMB-201ENST00000258733 PSMG4Q5JS54 123 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 DAZ4Q86SG3 579 aaKnown RBP6.12□□□□□ -1.43
GPNMB-201ENST00000258733 LYPD6Q86Y78 171 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 OR52N5Q8NH56 324 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 RTL8AQ9BWD3 113 aa6.12□□□□□ -1.43
GPNMB-201ENST00000258733 DAZ1Q9NQZ3 744 aaKnown RBP6.12□□□□□ -1.43
GPNMB-201ENST00000258733 DAZ3Q9NR90 486 aaKnown RBP6.12□□□□□ -1.43
GPNMB-201ENST00000258733 AMMECR1Q9Y4X0 333 aaPredicted RBP6.12□□□□□ -1.43
GPNMB-201ENST00000258733 IGHV3OR15-7A0A075B7D8 119 aa6.11□□□□□ -1.43
GPNMB-201ENST00000258733 TRAV41A0A0B4J266 112 aa6.11□□□□□ -1.43
GPNMB-201ENST00000258733 C19orf71A6NCJ1 209 aa6.11□□□□□ -1.43
GPNMB-201ENST00000258733 COX5AP20674 150 aa6.11□□□□□ -1.43
GPNMB-201ENST00000258733 IGF2BP2-AS1Q96M15 143 aa6.11□□□□□ -1.43
GPNMB-201ENST00000258733 PRSS22Q9GZN4 317 aa6.11□□□□□ -1.43
GPNMB-201ENST00000258733 SMIM26A0A096LP01 95 aa6.11□□□□□ -1.43
GPNMB-201ENST00000258733 A0A0D9SEW6 157 aa6.11□□□□□ -1.43
GPNMB-201ENST00000258733 MGST3O14880 152 aa6.11□□□□□ -1.43
GPNMB-201ENST00000258733 GATA1P15976 413 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-201ENST00000258733 Q6ZRU5 148 aa6.11□□□□□ -1.43
GPNMB-201ENST00000258733 GPX7Q96SL4 187 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-201ENST00000258733 TRGV9Q99603 122 aa6.11□□□□□ -1.43
GPNMB-201ENST00000258733 PRSS27Q9BQR3 290 aa6.11□□□□□ -1.43
GPNMB-201ENST00000258733 EMC6Q9BV81 110 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms