RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 TEX36Q5VZQ5 186 aa8.12□□□□□ -1.11
SEMA6A-201ENST00000257414 FAM71F2Q6NXP2 309 aa8.12□□□□□ -1.11
SEMA6A-201ENST00000257414 STPG4Q8N801 248 aa8.12□□□□□ -1.11
SEMA6A-201ENST00000257414 PLXNB1O43157 2135 aa8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 LOC105371242A0A075B767 164 aa8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 IGHV3OR16-13A0A075B7E8 117 aa8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 IGHV3-74A0A0B4J1X5 117 aa8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 CNTFRP26992 372 aa8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 SPANXN1Q5VSR9 72 aa8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 SP5Q6BEB4 398 aaPredicted RBP8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 MRPS16Q9Y3D3 137 aaKnown RBP8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 OR2T8A6NH00 312 aa8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 PRSS46E5RG02 174 aa8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 GCSHP23434 173 aa8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 KLF17Q5JT82 389 aaPredicted RBP8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 A0A1B0GWJ7 208 aa8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 A1L4Q6 167 aa8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 IGLL1P15814 213 aa8.11□□□□□ -1.11
SEMA6A-201ENST00000257414 ZFHX2Q9C0A1 2572 aaPredicted RBP8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 C3orf36Q3SXR2 165 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 TMEM78Q5T7P6 136 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 MYOZ3Q8TDC0 251 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 ORAOV1Q8WV07 137 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 M0R3E3 92 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 CR1LQ2VPA4 569 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 TMEM155Q4W5P6 130 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 FER1L6-AS1Q8NA97 138 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 ARPC1AQ92747 370 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 SMIM12Q96EX1 92 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 CDH23Q9H251 3354 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 IGKV3-7A0A075B6H7 116 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 J3QR89 54 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 LOXP28300 417 aaPredicted RBP8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 C1orf229Q6ZS94 237 aaPredicted RBP8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 FAM167A-AS1Q96KT0 104 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 IGF2BP2-AS1Q96M15 143 aa8.1□□□□□ -1.11
SEMA6A-201ENST00000257414 ARMS2P0C7Q2 107 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 ESDP10768 282 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 THAP8Q8NA92 274 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 ZNF492Q9P255 531 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 COX11Q9Y6N1 276 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 CACNG7P62955 275 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 HIST1H1AQ02539 215 aaPredicted RBP8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 GAGE1Q13065 139 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 UBE2V1Q13404 147 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 ZNF503Q96F45 646 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 ADAMTS20P59510 1910 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 IGHV3-49A0A0A0MS15 119 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 C7orf71A4D174 169 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 FBLL1A6NHQ2 334 aaKnown RBP8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 BUB1B-PAK6H3BSN5 160 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 FAM106CPP0CH98 169 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 TM4SF20Q53R12 229 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 CT83Q5H943 113 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 PATE2Q6UY27 113 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 Q8N7P7 452 aa8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 PRRC2CQ9Y520 2896 aaKnown RBP8.09□□□□□ -1.11
SEMA6A-201ENST00000257414 A0A087X0K7 114 aa8.09□□□□□ -1.12
SEMA6A-201ENST00000257414 SMIM17P0DL12 118 aa8.09□□□□□ -1.12
SEMA6A-201ENST00000257414 COL8A2P25067 703 aa8.09□□□□□ -1.12
SEMA6A-201ENST00000257414 IGHV3-66A0A0C4DH42 116 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 D6R8Y8 96 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 CGB3P0DN86 165 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 CGB7P0DN87 165 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 CEACAM8P31997 349 aaPredicted RBP8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 IGFL2Q6UWQ7 119 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 SEM1Q6ZVN7 128 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 WIPF2Q8TF74 440 aaPredicted RBP8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 MS4A6AQ9H2W1 248 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 LDLRAD2Q5SZI1 272 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 EBLN2Q6P2I7 272 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 LINC00311Q8N616 119 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 GFRA4Q9GZZ7 299 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 TP53TG3Q9ULZ0 132 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 IGKV2-40A0A087WW87 121 aaPredicted RBP8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 IGHV1-24A0A0C4DH33 117 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 IGKV2D-40P01614 121 aaPredicted RBP8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 HBDP02042 147 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 FABP2P12104 132 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 AMMECR1LQ6DCA0 310 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 LYZL1Q6UWQ5 148 aa8.08□□□□□ -1.12
SEMA6A-201ENST00000257414 E7EUB6 86 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 FXYD7P58549 80 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 GUSBP1Q15486 140 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 UBTD1Q9HAC8 227 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 NAV3Q8IVL0 2385 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 E7EQL1 145 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 MGPP08493 103 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 Q6ZVH6 145 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 METTL26Q96S19 204 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 IGLC7A0M8Q6 106 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 NPIPB5A8MRT5 1133 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 ZNF207O43670 478 aaKnown RBP8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 NCR2O95944 276 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 DLX6P56179 175 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 PSG3Q16557 428 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 C16orf92Q96LL3 132 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 DYSFO75923 2080 aa8.07□□□□□ -1.12
SEMA6A-201ENST00000257414 ZNF672Q499Z4 452 aaPredicted RBP8.06□□□□□ -1.12
SEMA6A-201ENST00000257414 SHANK2-AS3Q9BTD1 123 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms