RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 TTC32Q5I0X7 151 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 RCC1LQ96I51 464 aaKnown RBP13.74□□□□□ -0.21
SORT1-201ENST00000256637 ZNF250P15622 560 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 MST1LQ2TV78 715 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 FOLR2P14207 255 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 EPDR1Q9UM22 224 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 AKAP6Q13023 2319 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 K7ERU9 68 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 IGHV4-38-2P0DP08 117 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 AZU1P20160 251 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 NR2C2APQ86WQ0 139 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 IGKV1OR2-108A0A075B7D4 117 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 TYMSP04818 313 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 ZNF48Q96MX3 618 aaPredicted RBP13.74□□□□□ -0.21
SORT1-201ENST00000256637 TNFSF13O75888 250 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 HBDP02042 147 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 UCP1P25874 307 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 C17orf82Q86X59 251 aaPredicted RBP13.74□□□□□ -0.21
SORT1-201ENST00000256637 USMG5Q96IX5 58 aa13.74□□□□□ -0.21
SORT1-201ENST00000256637 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.73□□□□□ -0.21
SORT1-201ENST00000256637 CCL24O00175 119 aa13.73□□□□□ -0.21
SORT1-201ENST00000256637 IGKV1-16P04430 117 aa13.73□□□□□ -0.21
SORT1-201ENST00000256637 C18orf12Q96KH6 178 aa13.73□□□□□ -0.21
SORT1-201ENST00000256637 TMEM256Q8N2U0 113 aa13.73□□□□□ -0.21
SORT1-201ENST00000256637 DEFB4AO15263 64 aa13.73□□□□□ -0.21
SORT1-201ENST00000256637 RPL36AP83881 106 aaKnown RBP13.73□□□□□ -0.21
SORT1-201ENST00000256637 RPL36ALQ969Q0 106 aaKnown RBP13.73□□□□□ -0.21
SORT1-201ENST00000256637 COQ2Q96H96 371 aa13.73□□□□□ -0.21
SORT1-201ENST00000256637 C10orf126Q8N4M7 172 aa13.72□□□□□ -0.21
SORT1-201ENST00000256637 SHISA3A0PJX4 238 aa13.72□□□□□ -0.21
SORT1-201ENST00000256637 GATA3P23771 443 aa13.72□□□□□ -0.21
SORT1-201ENST00000256637 C1QTNF4Q9BXJ3 329 aa13.72□□□□□ -0.21
SORT1-201ENST00000256637 APRG1Q8IVJ8 170 aa13.72□□□□□ -0.21
SORT1-201ENST00000256637 SLURP1P55000 103 aa13.72□□□□□ -0.21
SORT1-201ENST00000256637 ZNF345Q14585 488 aa13.72□□□□□ -0.21
SORT1-201ENST00000256637 C14orf178Q8N769 122 aaPredicted RBP13.72□□□□□ -0.21
SORT1-201ENST00000256637 CACNG8Q8WXS5 425 aa13.72□□□□□ -0.21
SORT1-201ENST00000256637 PAX4O43316 350 aa13.72□□□□□ -0.21
SORT1-201ENST00000256637 TRAF4Q9BUZ4 470 aaPredicted RBP13.71□□□□□ -0.21
SORT1-201ENST00000256637 TSSC4Q9Y5U2 329 aaPredicted RBP13.71□□□□□ -0.21
SORT1-201ENST00000256637 CD300EQ496F6 205 aaPredicted RBP13.71□□□□□ -0.21
SORT1-201ENST00000256637 VSIRQ9H7M9 311 aa13.71□□□□□ -0.21
SORT1-201ENST00000256637 ZNF561-AS1K7EIQ3 104 aa13.71□□□□□ -0.21
SORT1-201ENST00000256637 GAGE6Q13070 117 aa13.71□□□□□ -0.21
SORT1-201ENST00000256637 ZNF660Q6AZW8 331 aaPredicted RBP13.71□□□□□ -0.21
SORT1-201ENST00000256637 NUP210Q8TEM1 1887 aaPredicted RBP13.71□□□□□ -0.22
SORT1-201ENST00000256637 TNFRSF14Q92956 283 aa13.71□□□□□ -0.22
SORT1-201ENST00000256637 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.7□□□□□ -0.221e-8■■■■■ 27.8
SORT1-201ENST00000256637 LINC00473A8K010 186 aa13.7□□□□□ -0.22
SORT1-201ENST00000256637 SMKR1H3BMG3 65 aa13.7□□□□□ -0.22
SORT1-201ENST00000256637 C14orf144Q96I85 54 aa13.7□□□□□ -0.22
SORT1-201ENST00000256637 LAMTOR3Q9UHA4 124 aa13.7□□□□□ -0.22
SORT1-201ENST00000256637 DAZ1Q9NQZ3 744 aaKnown RBP13.7□□□□□ -0.22
SORT1-201ENST00000256637 CHTOPQ9Y3Y2 248 aaKnown RBP13.7□□□□□ -0.22
SORT1-201ENST00000256637 Q6ZQT7 251 aa13.7□□□□□ -0.22
SORT1-201ENST00000256637 COL4A3Q01955 1670 aa13.7□□□□□ -0.22
SORT1-201ENST00000256637 C6orf226Q5I0X4 101 aa13.7□□□□□ -0.22
SORT1-201ENST00000256637 ORMDL3Q8N138 153 aa13.7□□□□□ -0.22
SORT1-201ENST00000256637 DIAPH2-AS1Q14236 149 aa13.69□□□□□ -0.22
SORT1-201ENST00000256637 SRCAPQ6ZRS2 3230 aa13.69□□□□□ -0.22
SORT1-201ENST00000256637 IGKV2D-24A0A075B6R9 120 aa13.69□□□□□ -0.22
SORT1-201ENST00000256637 HOXB4P17483 251 aaPredicted RBP13.69□□□□□ -0.22
SORT1-201ENST00000256637 IGFBP3P17936 291 aaPredicted RBP13.69□□□□□ -0.22
SORT1-201ENST00000256637 EFNB3Q15768 340 aa13.69□□□□□ -0.22
SORT1-201ENST00000256637 TMEM155Q4W5P6 130 aa13.69□□□□□ -0.22
SORT1-201ENST00000256637 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
SORT1-201ENST00000256637 MCRIP2Q9BUT9 160 aaKnown RBP13.69□□□□□ -0.22
SORT1-201ENST00000256637 FABP2P12104 132 aa13.69□□□□□ -0.22
SORT1-201ENST00000256637 PLXNA2O75051 1894 aa13.69□□□□□ -0.22
SORT1-201ENST00000256637 LMO1P25800 156 aa13.69□□□□□ -0.22
SORT1-201ENST00000256637 ZNF625Q96I27 306 aaPredicted RBP13.69□□□□□ -0.22
SORT1-201ENST00000256637 SPTBN1Q01082 2364 aaKnown RBP13.69□□□□□ -0.22
SORT1-201ENST00000256637 NDUFS5O43920 106 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 LYPD3O95274 346 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 PAX2Q02962 417 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 DANCRP0C864 163 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 SS18Q15532 418 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 RFNGQ9Y644 331 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 IGHV4-61A0A0C4DH41 118 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 SH2D1AO60880 128 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 DMRTC2Q8IXT2 367 aaPredicted RBP13.68□□□□□ -0.22
SORT1-201ENST00000256637 IL36BQ9NZH7 164 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 FOXL1Q12952 345 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 C8orf49Q96NF6 230 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 ZNF407Q9C0G0 2248 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 TRAV8-1A0A0A6YYK1 113 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 ZNF503-AS2A6NEH8 195 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 GLRX5Q86SX6 157 aa13.68□□□□□ -0.22
SORT1-201ENST00000256637 INAFM1C9JVW0 142 aa13.67□□□□□ -0.22
SORT1-201ENST00000256637 THAP8Q8NA92 274 aa13.67□□□□□ -0.22
SORT1-201ENST00000256637 TNRC6AQ8NDV7 1962 aaKnown RBP13.67□□□□□ -0.22
SORT1-201ENST00000256637 TMEM158Q8WZ71 300 aa13.67□□□□□ -0.22
SORT1-201ENST00000256637 LIME1Q9H400 295 aa13.67□□□□□ -0.22
SORT1-201ENST00000256637 CCL1P22362 96 aa13.67□□□□□ -0.22
SORT1-201ENST00000256637 PRTN3P24158 256 aa13.67□□□□□ -0.22
SORT1-201ENST00000256637 TMEM86BQ8N661 226 aa13.67□□□□□ -0.22
SORT1-201ENST00000256637 TRAV9-2A0A087WT02 112 aa13.67□□□□□ -0.22
SORT1-201ENST00000256637 PNRC2Q9NPJ4 139 aaKnown RBP13.67□□□□□ -0.22
SORT1-201ENST00000256637 FAM215AQ9Y5M1 114 aa13.67□□□□□ -0.22
SORT1-201ENST00000256637 SRSF1Q07955 248 aaKnown RBP eCLIP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms