RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 PRR31Q5SQ13 230 aa12.48□□□□□ -0.41
RFX1-201ENST00000254325 PAM16Q9Y3D7 125 aa12.48□□□□□ -0.41
RFX1-201ENST00000254325 DMXL1Q9Y485 3027 aa12.48□□□□□ -0.41
RFX1-201ENST00000254325 IGHV3-49A0A0A0MS15 119 aa12.47□□□□□ -0.41
RFX1-201ENST00000254325 IGHV2-70DA0A0C4DH43 119 aa12.47□□□□□ -0.41
RFX1-201ENST00000254325 A6NNC1 897 aa12.47□□□□□ -0.41
RFX1-201ENST00000254325 CDPF1Q6NVV7 123 aa12.47□□□□□ -0.41
RFX1-201ENST00000254325 CIARTQ8N365 385 aaPredicted RBP12.47□□□□□ -0.41
RFX1-201ENST00000254325 LY6G5BQ8NDX9 201 aa12.47□□□□□ -0.41
RFX1-201ENST00000254325 IGHV3-66A0A0C4DH42 116 aa12.47□□□□□ -0.41
RFX1-201ENST00000254325 TOMM40O96008 361 aa12.47□□□□□ -0.41
RFX1-201ENST00000254325 CRYGCP07315 174 aa12.47□□□□□ -0.41
RFX1-201ENST00000254325 PSG9Q00887 426 aa12.47□□□□□ -0.41
RFX1-201ENST00000254325 DTX2Q86UW9 622 aa12.47□□□□□ -0.41
RFX1-201ENST00000254325 TMEM219Q86XT9 240 aa12.47□□□□□ -0.41
RFX1-201ENST00000254325 SHANK2-AS3Q9BTD1 123 aa12.47□□□□□ -0.41
RFX1-201ENST00000254325 FOXA3P55318 350 aaPredicted RBP12.47□□□□□ -0.41
RFX1-201ENST00000254325 CLEC19AQ6UXS0 136 aa12.47□□□□□ -0.41
RFX1-201ENST00000254325 TBL2Q9Y4P3 447 aaKnown RBP12.47□□□□□ -0.41
RFX1-201ENST00000254325 I3L2K1 104 aa12.46□□□□□ -0.41
RFX1-201ENST00000254325 ZFP36P26651 326 aaKnown RBP12.46□□□□□ -0.41
RFX1-201ENST00000254325 NUP35Q8NFH5 326 aa12.46□□□□□ -0.41
RFX1-201ENST00000254325 OR5R1Q8NH85 324 aa12.46□□□□□ -0.41
RFX1-201ENST00000254325 DIRC3C9JPN6 131 aa12.46□□□□□ -0.41
RFX1-201ENST00000254325 UBE2E1P51965 193 aa12.46□□□□□ -0.41
RFX1-201ENST00000254325 HSBP1L1C9JCN9 74 aa12.46□□□□□ -0.42
RFX1-201ENST00000254325 NPFFO15130 113 aa12.46□□□□□ -0.42
RFX1-201ENST00000254325 ZNF207O43670 478 aaKnown RBP12.46□□□□□ -0.42
RFX1-201ENST00000254325 NDUFB8O95169 186 aa12.46□□□□□ -0.42
RFX1-201ENST00000254325 HOXB4P17483 251 aaPredicted RBP12.46□□□□□ -0.42
RFX1-201ENST00000254325 C15orf32Q32M92 178 aa12.46□□□□□ -0.42
RFX1-201ENST00000254325 MAJINQ3KP22 176 aa12.46□□□□□ -0.42
RFX1-201ENST00000254325 ITLN2Q8WWU7 325 aaPredicted RBP12.46□□□□□ -0.42
RFX1-201ENST00000254325 TRAV40A0A0B4J280 105 aa12.46□□□□□ -0.42
RFX1-201ENST00000254325 FSTL3O95633 263 aa12.46□□□□□ -0.42
RFX1-201ENST00000254325 C1orf122Q6ZSJ8 110 aa12.46□□□□□ -0.42
RFX1-201ENST00000254325 LINC00527Q9UJ94 153 aa12.46□□□□□ -0.42
RFX1-201ENST00000254325 PSG8Q9UQ74 426 aa12.46□□□□□ -0.42
RFX1-201ENST00000254325 C20orf202A1L168 122 aa12.45□□□□□ -0.42
RFX1-201ENST00000254325 IGKV1-17P01599 117 aa12.45□□□□□ -0.42
RFX1-201ENST00000254325 ORM1P02763 201 aa12.45□□□□□ -0.42
RFX1-201ENST00000254325 CRYGBP07316 175 aa12.45□□□□□ -0.42
RFX1-201ENST00000254325 GZMBP10144 247 aa12.45□□□□□ -0.42
RFX1-201ENST00000254325 BRD3OSQ6XYD6 125 aa12.45□□□□□ -0.42
RFX1-201ENST00000254325 EEF1AKMT3Q96AZ1 226 aa12.45□□□□□ -0.42
RFX1-201ENST00000254325 ASCL2Q99929 193 aa12.45□□□□□ -0.42
RFX1-201ENST00000254325 K7EIM0 57 aa12.45□□□□□ -0.42
RFX1-201ENST00000254325 M0R3E3 92 aa12.45□□□□□ -0.42
RFX1-201ENST00000254325 CD33P20138 364 aa12.45□□□□□ -0.42
RFX1-201ENST00000254325 TMEM189A5PLL7 270 aa12.45□□□□□ -0.42
RFX1-201ENST00000254325 RELQ04864 619 aaPredicted RBP12.45□□□□□ -0.42
RFX1-201ENST00000254325 FAM19A2Q8N3H0 131 aa12.45□□□□□ -0.42
RFX1-201ENST00000254325 CLEC3BP05452 202 aa12.44□□□□□ -0.42
RFX1-201ENST00000254325 ATP5G2Q06055 141 aa12.44□□□□□ -0.42
RFX1-201ENST00000254325 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.44□□□□□ -0.42
RFX1-201ENST00000254325 RBPMS2Q6ZRY4 209 aaKnown RBP12.44□□□□□ -0.42
RFX1-201ENST00000254325 METTL26Q96S19 204 aa12.44□□□□□ -0.42
RFX1-201ENST00000254325 C7orf69Q9H7B7 122 aa12.44□□□□□ -0.42
RFX1-201ENST00000254325 NBEAQ8NFP9 2946 aa12.44□□□□□ -0.42
RFX1-201ENST00000254325 FAM120AOSQ5T036 256 aa12.44□□□□□ -0.42
RFX1-201ENST00000254325 C11orf71Q6IPW1 123 aa12.44□□□□□ -0.42
RFX1-201ENST00000254325 RAB4AP20338 218 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 COA6Q5JTJ3 125 aaKnown RBP12.43□□□□□ -0.42
RFX1-201ENST00000254325 NPBQ8NG41 125 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 IGF2BP2-AS1Q96M15 143 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 VAMP3Q15836 100 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 LY6LH3BQJ8 138 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 M0R143 59 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 FRMD6-AS1P0C7T7 363 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 PF4V1P10720 104 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 GP9P14770 177 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 ZNF491Q8N8L2 437 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 TMEM136Q6ZRR5 245 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 FA2HQ7L5A8 372 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 Q86TA4 180 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 PRSS3P2Q8NHM4 247 aa12.43□□□□□ -0.42
RFX1-201ENST00000254325 IGKV3-7A0A075B6H7 116 aa12.42□□□□□ -0.42
RFX1-201ENST00000254325 NPIPB5A8MRT5 1133 aa12.42□□□□□ -0.42
RFX1-201ENST00000254325 TRGV3P03979 118 aa12.42□□□□□ -0.42
RFX1-201ENST00000254325 COTL1Q14019 142 aa12.42□□□□□ -0.42
RFX1-201ENST00000254325 RUSC1-AS1Q66K80 236 aa12.42□□□□□ -0.42
RFX1-201ENST00000254325 SMIM27A0A1W2PRY6 76 aa12.42□□□□□ -0.42
RFX1-201ENST00000254325 KCNS1Q96KK3 526 aa12.42□□□□□ -0.42
RFX1-201ENST00000254325 ZFP30Q9Y2G7 519 aa12.42□□□□□ -0.42
RFX1-201ENST00000254325 TRBV19A0A075B6N1 114 aa12.42□□□□□ -0.42
RFX1-201ENST00000254325 ATP6V0E1O15342 81 aa12.42□□□□□ -0.42
RFX1-201ENST00000254325 FAM231DQ6ZW35 169 aa12.42□□□□□ -0.42
RFX1-201ENST00000254325 C17orf77Q96MU5 243 aa12.42□□□□□ -0.42
RFX1-201ENST00000254325 PSMB11A5LHX3 300 aa12.41□□□□□ -0.42
RFX1-201ENST00000254325 SMIM15Q7Z3B0 74 aa12.41□□□□□ -0.42
RFX1-201ENST00000254325 TMEM14CQ9P0S9 112 aa12.41□□□□□ -0.42
RFX1-201ENST00000254325 HIF1ANQ9NWT6 349 aa12.41□□□□□ -0.42
RFX1-201ENST00000254325 H3BRN7 92 aa12.41□□□□□ -0.42
RFX1-201ENST00000254325 PLP1P60201 277 aa12.41□□□□□ -0.42
RFX1-201ENST00000254325 CFHR4Q92496 578 aa12.41□□□□□ -0.42
RFX1-201ENST00000254325 PRORYQ9H606 182 aa12.41□□□□□ -0.42
RFX1-201ENST00000254325 NRN1Q9NPD7 142 aa12.41□□□□□ -0.42
RFX1-201ENST00000254325 C19orf84I3L1E1 186 aa12.41□□□□□ -0.42
RFX1-201ENST00000254325 OR10J3Q5JRS4 329 aa12.41□□□□□ -0.42
RFX1-201ENST00000254325 LDLRAD2Q5SZI1 272 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms