RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 PLXNB1O43157 2135 aa15.1■□□□□ 0.01
SNX4-201ENST00000251775 IGLV2-23P01705 113 aa15.1■□□□□ 0.01
SNX4-201ENST00000251775 FOXC1Q12948 553 aa15.1■□□□□ 0.01
SNX4-201ENST00000251775 TMEM186Q96B77 213 aa15.1■□□□□ 0.01
SNX4-201ENST00000251775 ZC2HC1AQ96GY0 325 aa15.1■□□□□ 0.01
SNX4-201ENST00000251775 TMUB1Q9BVT8 246 aa15.1■□□□□ 0.01
SNX4-201ENST00000251775 CHEK1O14757 476 aa15.09■□□□□ 0.01
SNX4-201ENST00000251775 FMC1Q96HJ9 113 aa15.09■□□□□ 0.01
SNX4-201ENST00000251775 HSPB8Q9UJY1 196 aa15.09■□□□□ 0.01
SNX4-201ENST00000251775 NBEAP1P0C6P0 100 aa15.09■□□□□ 0.01
SNX4-201ENST00000251775 IGLC1P0CG04 106 aa15.09■□□□□ 0.01
SNX4-201ENST00000251775 ORM2P19652 201 aa15.09■□□□□ 0.01
SNX4-201ENST00000251775 TMEM155Q4W5P6 130 aa15.09■□□□□ 0.01
SNX4-201ENST00000251775 ASCL5Q7RTU5 278 aa15.09■□□□□ 0.01
SNX4-201ENST00000251775 C8orf31Q8N9H6 132 aa15.09■□□□□ 0.01
SNX4-201ENST00000251775 STXBP6Q8NFX7 210 aa15.09■□□□□ 0.01
SNX4-201ENST00000251775 K7ERU9 68 aa15.08■□□□□ 0.01
SNX4-201ENST00000251775 COX8AP10176 69 aa15.08■□□□□ 0.01
SNX4-201ENST00000251775 RUSC1-AS1Q66K80 236 aa15.08■□□□□ 0.01
SNX4-201ENST00000251775 PERPQ96FX8 193 aa15.08■□□□□ 0.01
SNX4-201ENST00000251775 RITA1Q96K30 269 aa15.08■□□□□ 0.01
SNX4-201ENST00000251775 KAAG1Q9UBP8 84 aa15.08■□□□□ 0.01
SNX4-201ENST00000251775 ADGRG4Q8IZF6 3080 aa15.08■□□□□ 0
SNX4-201ENST00000251775 APOHP02749 345 aaPredicted RBP15.08■□□□□ 0
SNX4-201ENST00000251775 ARF6P62330 175 aa15.08■□□□□ 0
SNX4-201ENST00000251775 C5orf17Q8NAS9 161 aa15.08■□□□□ 0
SNX4-201ENST00000251775 NEU4Q8WWR8 484 aaPredicted RBP15.08■□□□□ 0
SNX4-201ENST00000251775 C7orf71A4D174 169 aa15.07■□□□□ 0
SNX4-201ENST00000251775 OR1B1Q8NGR6 318 aa15.07■□□□□ 0
SNX4-201ENST00000251775 OR4A5Q8NH83 315 aa15.07■□□□□ 0
SNX4-201ENST00000251775 DAZAP1Q96EP5 407 aaKnown RBP15.07■□□□□ 0
SNX4-201ENST00000251775 NGBQ9NPG2 151 aa15.07■□□□□ 0
SNX4-201ENST00000251775 TPSG1Q9NRR2 321 aa15.07■□□□□ 0
SNX4-201ENST00000251775 C22orf46C9J442 243 aa15.07■□□□□ 0
SNX4-201ENST00000251775 NPIPB6E9PJ23 425 aa15.07■□□□□ 0
SNX4-201ENST00000251775 H3BTX0 84 aa15.07■□□□□ 0
SNX4-201ENST00000251775 OVOL3O00110 214 aa15.07■□□□□ 0
SNX4-201ENST00000251775 TCRAP04437 139 aa15.07■□□□□ 0
SNX4-201ENST00000251775 CSN3P07498 182 aa15.07■□□□□ 0
SNX4-201ENST00000251775 IGHV1-8P0DP01 117 aa15.07■□□□□ 0
SNX4-201ENST00000251775 VSTM2AQ8TAG5 236 aa15.07■□□□□ 0
SNX4-201ENST00000251775 TIMM8BQ9Y5J9 83 aaPredicted RBP15.07■□□□□ 0
SNX4-201ENST00000251775 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.06■□□□□ 0
SNX4-201ENST00000251775 FAM231BA6NCW3 169 aa15.06■□□□□ 0
SNX4-201ENST00000251775 HAX1O00165 279 aa15.06■□□□□ 0
SNX4-201ENST00000251775 SNAI2O43623 268 aa15.06■□□□□ 0
SNX4-201ENST00000251775 SLC25A17O43808 307 aa15.06■□□□□ 0
SNX4-201ENST00000251775 S100A7P31151 101 aa15.06■□□□□ 0
SNX4-201ENST00000251775 MRGPRG-AS1Q2M3A8 158 aa15.06■□□□□ 0
SNX4-201ENST00000251775 K7ENP7 123 aa15.05■□□□□ 0
SNX4-201ENST00000251775 DLX1P56177 255 aa15.05■□□□□ 0
SNX4-201ENST00000251775 BPIFA4PQ86YQ2 179 aa15.05■□□□□ 0
SNX4-201ENST00000251775 IGHV3-72A0A0B4J1Y9 119 aa15.05■□□□□ -0
SNX4-201ENST00000251775 GP9P14770 177 aa15.05■□□□□ -0
SNX4-201ENST00000251775 APOBEC3AP31941 199 aaPredicted RBP15.05■□□□□ -0
SNX4-201ENST00000251775 SUB1P53999 127 aaKnown RBP eCLIP15.05■□□□□ -02e-8■■■■■ 42.6
SNX4-201ENST00000251775 Q71RC1 249 aaPredicted RBP15.05■□□□□ -0
SNX4-201ENST00000251775 TEX45Q8NA69 505 aa15.05■□□□□ -0
SNX4-201ENST00000251775 SCNM1Q9BWG6 230 aa15.05■□□□□ -0
SNX4-201ENST00000251775 MEGF9Q9H1U4 602 aa15.05■□□□□ -0
SNX4-201ENST00000251775 Q9H3A6 140 aa15.05■□□□□ -0
SNX4-201ENST00000251775 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.04■□□□□ -0
SNX4-201ENST00000251775 SAP30O75446 220 aa15.04■□□□□ -0
SNX4-201ENST00000251775 NCR2O95944 276 aa15.04■□□□□ -0
SNX4-201ENST00000251775 FAM87AP0C7U9 286 aa15.04■□□□□ -0
SNX4-201ENST00000251775 ZNF747Q9BV97 191 aa15.04■□□□□ -0
SNX4-201ENST00000251775 TRAV8-1A0A0A6YYK1 113 aa15.04■□□□□ -0
SNX4-201ENST00000251775 COL8A1P27658 744 aa15.04■□□□□ -0
SNX4-201ENST00000251775 HTR1DP28221 377 aa15.04■□□□□ -0
SNX4-201ENST00000251775 PRB3Q04118 309 aaPredicted RBP15.04■□□□□ -0
SNX4-201ENST00000251775 TMEM97Q5BJF2 176 aa15.04■□□□□ -0
SNX4-201ENST00000251775 CIARTQ8N365 385 aaPredicted RBP15.04■□□□□ -0
SNX4-201ENST00000251775 DCHS1Q96JQ0 3298 aa15.03■□□□□ -0
SNX4-201ENST00000251775 A0A1W2PPI3 338 aa15.03■□□□□ -0
SNX4-201ENST00000251775 LYNX1G3V0Z9 82 aa15.03■□□□□ -0
SNX4-201ENST00000251775 LYNX1P0DP58 116 aa15.03■□□□□ -0
SNX4-201ENST00000251775 SEC11AP67812 179 aa15.03■□□□□ -0
SNX4-201ENST00000251775 UFSP1Q6NVU6 142 aa15.03■□□□□ -0
SNX4-201ENST00000251775 TMEM133Q9H2Q1 129 aa15.03■□□□□ -0
SNX4-201ENST00000251775 PTPRQQ9UMZ3 2332 aa15.03■□□□□ -0
SNX4-201ENST00000251775 GAGE10A6NGK3 116 aa15.03■□□□□ -0
SNX4-201ENST00000251775 ENSAO43768 121 aaKnown RBP15.03■□□□□ -0
SNX4-201ENST00000251775 RBPJQ06330 500 aa15.03■□□□□ -0
SNX4-201ENST00000251775 Q86TA4 180 aa15.03■□□□□ -0
SNX4-201ENST00000251775 VKORC1Q9BQB6 163 aa15.03■□□□□ -0
SNX4-201ENST00000251775 AP5S1Q9NUS5 200 aa15.03■□□□□ -0
SNX4-201ENST00000251775 KALRNO60229 2985 aa15.03■□□□□ -0
SNX4-201ENST00000251775 FGF6P10767 208 aa15.02■□□□□ -0
SNX4-201ENST00000251775 MC5RP33032 325 aa15.02■□□□□ -0
SNX4-201ENST00000251775 VMA21Q3ZAQ7 101 aa15.02■□□□□ -0
SNX4-201ENST00000251775 B9A039 149 aa15.02□□□□□ -0.01
SNX4-201ENST00000251775 CD3EP07766 207 aa15.02□□□□□ -0.01
SNX4-201ENST00000251775 C16orf54Q6UWD8 224 aa15.02□□□□□ -0.01
SNX4-201ENST00000251775 LINC01560Q8TB33 94 aa15.02□□□□□ -0.01
SNX4-201ENST00000251775 MALRD1Q5VYJ5 2156 aa15.02□□□□□ -0.01
SNX4-201ENST00000251775 TLN1Q9Y490 2541 aaKnown RBP15.01□□□□□ -0.01
SNX4-201ENST00000251775 CRYGCP07315 174 aa15.01□□□□□ -0.01
SNX4-201ENST00000251775 FER1L6-AS1Q8NA97 138 aa15.01□□□□□ -0.01
SNX4-201ENST00000251775 JMJD8Q96S16 334 aa15.01□□□□□ -0.01
SNX4-201ENST00000251775 IGLV2-11P01706 119 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms