RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MRPL18Q9H0U6 180 aaKnown RBP12.51□□□□□ -0.41
LRFN1-201ENST00000248668 CHODLQ9H9P2 273 aa12.51□□□□□ -0.41
LRFN1-201ENST00000248668 UBE2V1Q13404 147 aa12.51□□□□□ -0.41
LRFN1-201ENST00000248668 VMO1Q7Z5L0 202 aa12.51□□□□□ -0.41
LRFN1-201ENST00000248668 BAGE2Q86Y30 109 aa12.51□□□□□ -0.41
LRFN1-201ENST00000248668 TMEM116Q8NCL8 245 aa12.51□□□□□ -0.41
LRFN1-201ENST00000248668 ZNF738Q8NE65 137 aa12.51□□□□□ -0.41
LRFN1-201ENST00000248668 IGF2BP2-AS1Q96M15 143 aa12.51□□□□□ -0.41
LRFN1-201ENST00000248668 TMEM238LA0A1B0GVL6 79 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 HSBP1L1C9JCN9 74 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 NBR2O15453 112 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 TP53TG3Q9ULZ0 132 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 C19orf84I3L1E1 186 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 IGHV3-23P01764 117 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 GNLYP22749 145 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 BAGE3Q86Y29 109 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 TRGV9Q99603 122 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 ARL2-SNX15V9GYD0 113 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 CRYBG3Q68DQ2 2970 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 NBEAP1P0C6P0 100 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 ZC2HC1AQ96GY0 325 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 ASCL2Q99929 193 aa12.5□□□□□ -0.41
LRFN1-201ENST00000248668 CHTOPQ9Y3Y2 248 aaKnown RBP12.5□□□□□ -0.41
LRFN1-201ENST00000248668 LINC00310P59036 64 aa12.49□□□□□ -0.41
LRFN1-201ENST00000248668 SPATA45Q537H7 98 aa12.49□□□□□ -0.41
LRFN1-201ENST00000248668 RASL11BQ9BPW5 248 aa12.49□□□□□ -0.41
LRFN1-201ENST00000248668 IGLC1P0CG04 106 aa12.49□□□□□ -0.41
LRFN1-201ENST00000248668 NEU4Q8WWR8 484 aaPredicted RBP12.49□□□□□ -0.41
LRFN1-201ENST00000248668 CFHR4Q92496 578 aa12.49□□□□□ -0.41
LRFN1-201ENST00000248668 LAMTOR2Q9Y2Q5 125 aa12.49□□□□□ -0.41
LRFN1-201ENST00000248668 CREBBPQ92793 2442 aa12.49□□□□□ -0.41
LRFN1-201ENST00000248668 NAT8BQ9UHF3 227 aa12.49□□□□□ -0.41
LRFN1-201ENST00000248668 LY96Q9Y6Y9 160 aa12.49□□□□□ -0.41
LRFN1-201ENST00000248668 I3L2K1 104 aa12.48□□□□□ -0.41
LRFN1-201ENST00000248668 CORTO00230 105 aa12.48□□□□□ -0.41
LRFN1-201ENST00000248668 PRTN3P24158 256 aa12.48□□□□□ -0.41
LRFN1-201ENST00000248668 TPPP2P59282 170 aa12.48□□□□□ -0.41
LRFN1-201ENST00000248668 CUBNO60494 3623 aa12.48□□□□□ -0.41
LRFN1-201ENST00000248668 UBE2G1P62253 170 aa12.48□□□□□ -0.41
LRFN1-201ENST00000248668 OR11H6Q8NGC7 330 aa12.48□□□□□ -0.41
LRFN1-201ENST00000248668 FBXL7Q9UJT9 491 aa12.48□□□□□ -0.41
LRFN1-201ENST00000248668 CDC42EP3Q9UKI2 254 aa12.48□□□□□ -0.41
LRFN1-201ENST00000248668 HIGD1AQ9Y241 93 aa12.48□□□□□ -0.41
LRFN1-201ENST00000248668 UTP20O75691 2785 aaKnown RBP12.47□□□□□ -0.41
LRFN1-201ENST00000248668 TRAV8-1A0A0A6YYK1 113 aa12.47□□□□□ -0.41
LRFN1-201ENST00000248668 CEACAM3P40198 252 aa12.47□□□□□ -0.41
LRFN1-201ENST00000248668 Q71RC1 249 aaPredicted RBP12.47□□□□□ -0.41
LRFN1-201ENST00000248668 IGKV1-17P01599 117 aa12.47□□□□□ -0.41
LRFN1-201ENST00000248668 NDPQ00604 133 aa12.47□□□□□ -0.41
LRFN1-201ENST00000248668 BCL6BQ8N143 479 aaPredicted RBP12.47□□□□□ -0.41
LRFN1-201ENST00000248668 EXOC3-AS1Q8N2X6 119 aa12.47□□□□□ -0.41
LRFN1-201ENST00000248668 K7EIM0 57 aa12.47□□□□□ -0.41
LRFN1-201ENST00000248668 PMCHP20382 165 aa12.47□□□□□ -0.41
LRFN1-201ENST00000248668 CSTL1Q9H114 145 aa12.47□□□□□ -0.41
LRFN1-201ENST00000248668 EPDR1Q9UM22 224 aa12.47□□□□□ -0.41
LRFN1-201ENST00000248668 USP9XQ93008 2570 aaPredicted RBP12.47□□□□□ -0.41
LRFN1-201ENST00000248668 IGHV3OR16-8A0A075B7F1 116 aa12.46□□□□□ -0.41
LRFN1-201ENST00000248668 CRISP2P16562 243 aa12.46□□□□□ -0.41
LRFN1-201ENST00000248668 OSTCQ9NRP0 149 aa12.46□□□□□ -0.41
LRFN1-201ENST00000248668 ABCA2Q9BZC7 2435 aa12.46□□□□□ -0.41
LRFN1-201ENST00000248668 IGHV3-35A0A0C4DH35 117 aa12.46□□□□□ -0.41
LRFN1-201ENST00000248668 DIRC3C9JPN6 131 aa12.46□□□□□ -0.41
LRFN1-201ENST00000248668 GP9P14770 177 aa12.46□□□□□ -0.41
LRFN1-201ENST00000248668 YPEL3P61236 119 aaPredicted RBP12.46□□□□□ -0.41
LRFN1-201ENST00000248668 C17orf77Q96MU5 243 aa12.46□□□□□ -0.41
LRFN1-201ENST00000248668 MEGF9Q9H1U4 602 aa12.46□□□□□ -0.41
LRFN1-201ENST00000248668 Q9H3A6 140 aa12.46□□□□□ -0.41
LRFN1-201ENST00000248668 ABCA12Q86UK0 2595 aa12.46□□□□□ -0.42
LRFN1-201ENST00000248668 CX3CL1P78423 397 aa12.46□□□□□ -0.42
LRFN1-201ENST00000248668 C5orf64Q2M2E5 130 aa12.46□□□□□ -0.42
LRFN1-201ENST00000248668 SLC25A39Q9BZJ4 359 aaPredicted RBP12.46□□□□□ -0.42
LRFN1-201ENST00000248668 BPESC1Q9GZL8 116 aa12.46□□□□□ -0.42
LRFN1-201ENST00000248668 SH2D7A6NKC9 451 aaPredicted RBP12.45□□□□□ -0.42
LRFN1-201ENST00000248668 MRPL52Q86TS9 123 aaKnown RBP12.45□□□□□ -0.42
LRFN1-201ENST00000248668 DTX2Q86UW9 622 aa12.45□□□□□ -0.42
LRFN1-201ENST00000248668 CST9LQ9H4G1 147 aa12.45□□□□□ -0.42
LRFN1-201ENST00000248668 ODF3BA8MYP8 253 aa12.45□□□□□ -0.42
LRFN1-201ENST00000248668 M0R1W7 72 aa12.45□□□□□ -0.42
LRFN1-201ENST00000248668 OCIAD2Q56VL3 154 aa12.45□□□□□ -0.42
LRFN1-201ENST00000248668 PVRIGQ6DKI7 326 aa12.45□□□□□ -0.42
LRFN1-201ENST00000248668 ITLN2Q8WWU7 325 aaPredicted RBP12.45□□□□□ -0.42
LRFN1-201ENST00000248668 TP73-AS1Q9UF72 201 aa12.45□□□□□ -0.42
LRFN1-201ENST00000248668 IGSF10Q6WRI0 2623 aa12.45□□□□□ -0.42
LRFN1-201ENST00000248668 IGHV3OR16-10A0A075B7F0 116 aa12.44□□□□□ -0.42
LRFN1-201ENST00000248668 IL4P05112 153 aa12.44□□□□□ -0.42
LRFN1-201ENST00000248668 HOXB4P17483 251 aaPredicted RBP12.44□□□□□ -0.42
LRFN1-201ENST00000248668 NTF3P20783 257 aa12.44□□□□□ -0.42
LRFN1-201ENST00000248668 FAM120AOSQ5T036 256 aa12.44□□□□□ -0.42
LRFN1-201ENST00000248668 CELSR2Q9HCU4 2923 aa12.44□□□□□ -0.42
LRFN1-201ENST00000248668 ORAOV1Q8WV07 137 aa12.44□□□□□ -0.42
LRFN1-201ENST00000248668 ZNF586Q9NXT0 402 aa12.44□□□□□ -0.42
LRFN1-201ENST00000248668 LINC00322Q6ZN03 302 aaPredicted RBP12.43□□□□□ -0.42
LRFN1-201ENST00000248668 STXBP6Q8NFX7 210 aa12.43□□□□□ -0.42
LRFN1-201ENST00000248668 SONP18583 2426 aaKnown RBP12.43□□□□□ -0.42
LRFN1-201ENST00000248668 MYCNOSP40205 109 aa12.43□□□□□ -0.42
LRFN1-201ENST00000248668 WFDC12Q8WWY7 111 aa12.43□□□□□ -0.42
LRFN1-201ENST00000248668 RNF5Q99942 180 aa12.43□□□□□ -0.42
LRFN1-201ENST00000248668 PRORYQ9H606 182 aa12.43□□□□□ -0.42
LRFN1-201ENST00000248668 CSMD2Q7Z408 3487 aa12.43□□□□□ -0.42
LRFN1-201ENST00000248668 CAMPP49913 170 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms