RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 OR11H7Q8NGC8 314 aa8.41□□□□□ -1.06
SF3B6-201ENST00000233468 PFDN5Q99471 154 aa8.41□□□□□ -1.06
SF3B6-201ENST00000233468 ARL6Q9H0F7 186 aa8.41□□□□□ -1.06
SF3B6-201ENST00000233468 U3KQK5 164 aa8.41□□□□□ -1.06
SF3B6-201ENST00000233468 LOC102724200A0A096LPH7 203 aaPredicted RBP8.4□□□□□ -1.06
SF3B6-201ENST00000233468 LYL1P12980 280 aa8.4□□□□□ -1.06
SF3B6-201ENST00000233468 RPL7P18124 248 aaKnown RBP8.4□□□□□ -1.06
SF3B6-201ENST00000233468 RPL29P47914 159 aaKnown RBP8.4□□□□□ -1.06
SF3B6-201ENST00000233468 APOC4P55056 127 aa8.4□□□□□ -1.06
SF3B6-201ENST00000233468 CLINT1Q14677 625 aa8.4□□□□□ -1.06
SF3B6-201ENST00000233468 INO80EQ8NBZ0 244 aaPredicted RBP8.4□□□□□ -1.06
SF3B6-201ENST00000233468 SCGB1C1Q8TD33 95 aa8.4□□□□□ -1.06
SF3B6-201ENST00000233468 MGST2Q99735 147 aa8.4□□□□□ -1.06
SF3B6-201ENST00000233468 ATP5SQ99766 215 aa8.4□□□□□ -1.06
SF3B6-201ENST00000233468 SHANK2-AS3Q9BTD1 123 aa8.4□□□□□ -1.06
SF3B6-201ENST00000233468 GGTLC1Q9BX51 225 aa8.4□□□□□ -1.06
SF3B6-201ENST00000233468 SLC25A39Q9BZJ4 359 aaPredicted RBP8.4□□□□□ -1.06
SF3B6-201ENST00000233468 ARV1Q9H2C2 271 aa8.4□□□□□ -1.06
SF3B6-201ENST00000233468 SLC25A22Q9H936 323 aa8.4□□□□□ -1.06
SF3B6-201ENST00000233468 DOK5Q9P104 306 aa8.4□□□□□ -1.06
SF3B6-201ENST00000233468 UBQLN2Q9UHD9 624 aa8.4□□□□□ -1.06
SF3B6-201ENST00000233468 HSPB11Q9Y547 144 aa8.4□□□□□ -1.06
SF3B6-201ENST00000233468 K7EQG2 157 aa8.39□□□□□ -1.07
SF3B6-201ENST00000233468 B2MP61769 119 aa8.39□□□□□ -1.07
SF3B6-201ENST00000233468 ODF3L2Q3SX64 289 aa8.39□□□□□ -1.07
SF3B6-201ENST00000233468 C10orf113Q5VZT2 155 aa8.39□□□□□ -1.07
SF3B6-201ENST00000233468 TMEM182Q6ZP80 229 aaPredicted RBP8.39□□□□□ -1.07
SF3B6-201ENST00000233468 DCANP1Q8TF63 244 aa8.39□□□□□ -1.07
SF3B6-201ENST00000233468 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
SF3B6-201ENST00000233468 MAP6D1Q9H9H5 199 aa8.39□□□□□ -1.07
SF3B6-201ENST00000233468 DNAJC4Q9NNZ3 241 aa8.39□□□□□ -1.07
SF3B6-201ENST00000233468 H3BRN7 92 aa8.38□□□□□ -1.07
SF3B6-201ENST00000233468 UBE2CO00762 179 aa8.38□□□□□ -1.07
SF3B6-201ENST00000233468 ATF4P18848 351 aaPredicted RBP8.38□□□□□ -1.07
SF3B6-201ENST00000233468 DEFB131AP59861 70 aa8.38□□□□□ -1.07
SF3B6-201ENST00000233468 ZNF266Q14584 549 aa8.38□□□□□ -1.07
SF3B6-201ENST00000233468 OPCMLQ14982 345 aa8.38□□□□□ -1.07
SF3B6-201ENST00000233468 HAGHQ16775 308 aa8.38□□□□□ -1.07
SF3B6-201ENST00000233468 LINC00305Q7Z4B0 112 aa8.38□□□□□ -1.07
SF3B6-201ENST00000233468 SBSPONQ8IVN8 264 aa8.38□□□□□ -1.07
SF3B6-201ENST00000233468 OR2T35Q8NGX2 323 aa8.38□□□□□ -1.07
SF3B6-201ENST00000233468 GATAD1Q8WUU5 269 aa8.38□□□□□ -1.07
SF3B6-201ENST00000233468 NPCDR1Q9BY65 106 aa8.38□□□□□ -1.07
SF3B6-201ENST00000233468 WDR61Q9GZS3 305 aaKnown RBP8.38□□□□□ -1.07
SF3B6-201ENST00000233468 SLC39A9Q9NUM3 307 aa8.38□□□□□ -1.07
SF3B6-201ENST00000233468 PXMP4Q9Y6I8 212 aa8.38□□□□□ -1.07
SF3B6-201ENST00000233468 HUWE1Q7Z6Z7 4374 aaKnown RBP8.37□□□□□ -1.07
SF3B6-201ENST00000233468 KIR2DL5BA0A0G2JN68 375 aa8.37□□□□□ -1.07
SF3B6-201ENST00000233468 KIR2DL5BA0A0G2JPC4 375 aa8.37□□□□□ -1.07
SF3B6-201ENST00000233468 ISLRO14498 428 aa8.37□□□□□ -1.07
SF3B6-201ENST00000233468 PSMB3P49720 205 aa8.37□□□□□ -1.07
SF3B6-201ENST00000233468 MIC13Q5XKP0 118 aa8.37□□□□□ -1.07
SF3B6-201ENST00000233468 LINC00322Q6ZN03 302 aaPredicted RBP8.37□□□□□ -1.07
SF3B6-201ENST00000233468 BPIFA4PQ86YQ2 179 aa8.37□□□□□ -1.07
SF3B6-201ENST00000233468 STHQ8IWL8 128 aa8.37□□□□□ -1.07
SF3B6-201ENST00000233468 KIR2DL5AQ8N109 375 aa8.37□□□□□ -1.07
SF3B6-201ENST00000233468 KIR2DL5BQ8NHK3 375 aa8.37□□□□□ -1.07
SF3B6-201ENST00000233468 AQP10Q96PS8 301 aa8.37□□□□□ -1.07
SF3B6-201ENST00000233468 RSG1Q9BU20 258 aa8.37□□□□□ -1.07
SF3B6-201ENST00000233468 PARD6GQ9BYG4 376 aaPredicted RBP8.37□□□□□ -1.07
SF3B6-201ENST00000233468 WFDC10AQ9H1F0 79 aa8.37□□□□□ -1.07
SF3B6-201ENST00000233468 SLC25A32Q9H2D1 315 aa8.37□□□□□ -1.07
SF3B6-201ENST00000233468 TMEM238LA0A1B0GVL6 79 aa8.36□□□□□ -1.07
SF3B6-201ENST00000233468 RBMY1BA6NDE4 496 aaKnown RBP8.36□□□□□ -1.07
SF3B6-201ENST00000233468 RBMY1EA6NEQ0 496 aaKnown RBP8.36□□□□□ -1.07
SF3B6-201ENST00000233468 RBMY1DP0C7P1 496 aaKnown RBP8.36□□□□□ -1.07
SF3B6-201ENST00000233468 ZNF688P0C7X2 276 aa8.36□□□□□ -1.07
SF3B6-201ENST00000233468 PSMG4Q5JS54 123 aa8.36□□□□□ -1.07
SF3B6-201ENST00000233468 APRG1Q8IVJ8 170 aa8.36□□□□□ -1.07
SF3B6-201ENST00000233468 LRRC20Q8TCA0 184 aa8.36□□□□□ -1.07
SF3B6-201ENST00000233468 C16orf92Q96LL3 132 aa8.36□□□□□ -1.07
SF3B6-201ENST00000233468 TM2D3Q9BRN9 247 aa8.36□□□□□ -1.07
SF3B6-201ENST00000233468 SCRT1Q9BWW7 348 aa8.36□□□□□ -1.07
SF3B6-201ENST00000233468 SMIM3Q9BZL3 60 aa8.36□□□□□ -1.07
SF3B6-201ENST00000233468 FXYD6-FXYD2A0A087WZ82 144 aa8.35□□□□□ -1.07
SF3B6-201ENST00000233468 CXCL2P19875 107 aa8.35□□□□□ -1.07
SF3B6-201ENST00000233468 NUTF2P61970 127 aaKnown RBP8.35□□□□□ -1.07
SF3B6-201ENST00000233468 TMEM41BQ5BJD5 291 aa8.35□□□□□ -1.07
SF3B6-201ENST00000233468 SPATA31B1PQ5VZV4 182 aa8.35□□□□□ -1.07
SF3B6-201ENST00000233468 LEMD1Q68G75 181 aa8.35□□□□□ -1.07
SF3B6-201ENST00000233468 PATE2Q6UY27 113 aa8.35□□□□□ -1.07
SF3B6-201ENST00000233468 TMEM37Q8WXS4 190 aa8.35□□□□□ -1.07
SF3B6-201ENST00000233468 LINC00052Q96N35 136 aa8.35□□□□□ -1.07
SF3B6-201ENST00000233468 UHRF2Q96PU4 802 aa8.35□□□□□ -1.07
SF3B6-201ENST00000233468 CSTL1Q9H114 145 aa8.35□□□□□ -1.07
SF3B6-201ENST00000233468 CLEC5AQ9NY25 188 aa8.35□□□□□ -1.07
SF3B6-201ENST00000233468 RYR2Q92736 4967 aa8.34□□□□□ -1.07
SF3B6-201ENST00000233468 A0A087X0K7 114 aa8.34□□□□□ -1.07
SF3B6-201ENST00000233468 RPL35AP18077 110 aaKnown RBP8.34□□□□□ -1.07
SF3B6-201ENST00000233468 GUK1Q16774 197 aa8.34□□□□□ -1.07
SF3B6-201ENST00000233468 CASC10Q5T4H9 136 aa8.34□□□□□ -1.07
SF3B6-201ENST00000233468 EBLN2Q6P2I7 272 aa8.34□□□□□ -1.07
SF3B6-201ENST00000233468 MORN3Q6PF18 240 aaPredicted RBP8.34□□□□□ -1.07
SF3B6-201ENST00000233468 Q6ZWC4 215 aa8.34□□□□□ -1.07
SF3B6-201ENST00000233468 FAM24BQ8N5W8 94 aa8.34□□□□□ -1.07
SF3B6-201ENST00000233468 RCHY1Q96PM5 261 aa8.34□□□□□ -1.07
SF3B6-201ENST00000233468 MRPL32Q9BYC8 188 aaKnown RBP8.34□□□□□ -1.07
SF3B6-201ENST00000233468 RPRMQ9NS64 109 aa8.34□□□□□ -1.07
SF3B6-201ENST00000233468 DYNC2H1Q8NCM8 4307 aaKnown RBP8.33□□□□□ -1.08
SF3B6-201ENST00000233468 DNAH7Q8WXX0 4024 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms