RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 A0A1W2PQF6 199 aa10.4□□□□□ -0.74
MSH2-201ENST00000233146 C1orf53Q5VUE5 145 aa10.4□□□□□ -0.74
MSH2-201ENST00000233146 PPP1R27Q86WC6 154 aa10.4□□□□□ -0.74
MSH2-201ENST00000233146 ENY2Q9NPA8 101 aa10.4□□□□□ -0.74
MSH2-201ENST00000233146 A0A0J9YW62 118 aa10.4□□□□□ -0.74
MSH2-201ENST00000233146 D6R8Y8 96 aa10.4□□□□□ -0.74
MSH2-201ENST00000233146 IGKCP01834 107 aa10.4□□□□□ -0.74
MSH2-201ENST00000233146 IL4P05112 153 aa10.4□□□□□ -0.74
MSH2-201ENST00000233146 COL8A1P27658 744 aa10.4□□□□□ -0.74
MSH2-201ENST00000233146 TMEM78Q5T7P6 136 aa10.4□□□□□ -0.74
MSH2-201ENST00000233146 ZNF493Q6ZR52 646 aa10.4□□□□□ -0.75
MSH2-201ENST00000233146 WFDC3Q8IUB2 231 aa10.4□□□□□ -0.75
MSH2-201ENST00000233146 SPRY4Q9C004 299 aa10.4□□□□□ -0.75
MSH2-201ENST00000233146 TMEM14BQ9NUH8 114 aa10.4□□□□□ -0.75
MSH2-201ENST00000233146 FOXA2Q9Y261 457 aaPredicted RBP10.4□□□□□ -0.75
MSH2-201ENST00000233146 LINC01619G3V211 115 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 FSTL3O95633 263 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 KIR2DL1P43626 348 aaPredicted RBP10.39□□□□□ -0.75
MSH2-201ENST00000233146 CXCL12P48061 93 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 AAED1Q7RTV5 226 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 ZNF714Q96N38 554 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 RASL11BQ9BPW5 248 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 CRISPLD2Q9H0B8 497 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 IGHV3-43A0A0B4J1X8 118 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 PGPA6NDG6 321 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 PSPNO60542 156 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 IGHV3-43DP0DP04 118 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 Q8IYB0 196 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 CIARTQ8N365 385 aaPredicted RBP10.39□□□□□ -0.75
MSH2-201ENST00000233146 DNAJC30Q96LL9 226 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 PRNDQ9UKY0 176 aa10.39□□□□□ -0.75
MSH2-201ENST00000233146 DEFB108AA8MXU0 73 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 PLGLB1Q02325 96 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 TFF2Q03403 129 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 ZC2HC1BQ5TFG8 222 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 FCER1GP30273 86 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 UBE2D3P61077 147 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 UBE2D2P62837 147 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 MLANAQ16655 118 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 ALKBH6Q3KRA9 238 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 ZFP2Q6ZN57 461 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 PDPNQ86YL7 162 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 RPP25Q9BUL9 199 aaKnown RBP10.38□□□□□ -0.75
MSH2-201ENST00000233146 A8MWV9 139 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 DKK1O94907 266 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 PATE2Q6UY27 113 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 ANKRD29Q8N6D5 301 aa10.38□□□□□ -0.75
MSH2-201ENST00000233146 RBMXL3Q8N7X1 1067 aaKnown RBP10.37□□□□□ -0.75
MSH2-201ENST00000233146 LINC01587Q99440 93 aa10.37□□□□□ -0.75
MSH2-201ENST00000233146 PRRG4Q9BZD6 226 aa10.37□□□□□ -0.75
MSH2-201ENST00000233146 OCIAD1Q9NX40 245 aa10.37□□□□□ -0.75
MSH2-201ENST00000233146 SMIM9A6NGZ8 99 aa10.37□□□□□ -0.75
MSH2-201ENST00000233146 COX7A2P2O60397 106 aa10.37□□□□□ -0.75
MSH2-201ENST00000233146 SPRNQ5BIV9 151 aa10.37□□□□□ -0.75
MSH2-201ENST00000233146 C10orf113Q5VZT2 155 aa10.37□□□□□ -0.75
MSH2-201ENST00000233146 ORMDL3Q8N138 153 aa10.36□□□□□ -0.75
MSH2-201ENST00000233146 DPM2O94777 84 aa10.36□□□□□ -0.75
MSH2-201ENST00000233146 HES3Q5TGS1 186 aa10.36□□□□□ -0.75
MSH2-201ENST00000233146 Q6ZQT7 251 aa10.36□□□□□ -0.75
MSH2-201ENST00000233146 WDR86Q86TI4 376 aa10.36□□□□□ -0.75
MSH2-201ENST00000233146 MYMXA0A1B0GTQ4 84 aa10.36□□□□□ -0.75
MSH2-201ENST00000233146 A4D1N5 150 aa10.36□□□□□ -0.75
MSH2-201ENST00000233146 OR1L4Q8NGR5 311 aa10.36□□□□□ -0.75
MSH2-201ENST00000233146 CHCHD2Q9Y6H1 151 aaPredicted RBP10.36□□□□□ -0.75
MSH2-201ENST00000233146 OR10J6PQ8NGY7 276 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 SRSF12Q8WXF0 261 aaKnown RBP10.35□□□□□ -0.75
MSH2-201ENST00000233146 FZR1Q9UM11 496 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 LILRA5A6NI73 299 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 ZNF785A8K8V0 405 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 CEACAM4O75871 244 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 TCRAP04437 139 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 FAM104BQ5XKR9 115 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 S1PR3Q99500 378 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 TMSB15BA0A087X1C1 80 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 LOC107984156A0A0G2JMH3 177 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 TNFRSF1AP19438 455 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 ARL17AQ8IVW1 177 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 C1orf210Q8IVY1 113 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 RFESDQ8TAC1 157 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 IFI27L2Q9H2X8 130 aa10.35□□□□□ -0.75
MSH2-201ENST00000233146 SPTY2D1-AS1A0A0U1RR47 76 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 LINC01549A6NIU2 74 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 DNPH1O43598 174 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 ZFAND5O76080 213 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 CELA2AP08217 269 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 CD69Q07108 199 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 C2orf83Q53S99 150 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 A0A1W2PPI3 338 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 PRSS1P07477 247 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 KIR2DS2P43631 304 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 TWIST1Q15672 202 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 Q86TA4 180 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 FAM173AQ9BQD7 235 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 PROK2Q9HC23 129 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 FRYLO94915 3013 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 TTC28Q96AY4 2481 aa10.34□□□□□ -0.75
MSH2-201ENST00000233146 CITED2Q99967 270 aaPredicted RBP10.33□□□□□ -0.76
MSH2-201ENST00000233146 NCOR1O75376 2440 aa10.33□□□□□ -0.76
MSH2-201ENST00000233146 TCL1BO95988 128 aa10.33□□□□□ -0.76
MSH2-201ENST00000233146 LINC00694P0DN24 101 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms