RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 FCN3O75636 299 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 IGHV3-53P01767 116 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 ZNF415Q09FC8 603 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 KIR3DS1Q14943 382 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 C17orf82Q86X59 251 aaPredicted RBP10.89□□□□□ -0.67
NEK4-201ENST00000233027 ZNF688P0C7X2 276 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 RNASE2P10153 161 aaKnown RBP10.89□□□□□ -0.67
NEK4-201ENST00000233027 CSTL1Q9H114 145 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 A0A0G2JNJ9 132 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 ATXN8Q156A1 80 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 GATD1Q8NB37 220 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 Q9UFV3 132 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 POLR3KQ9Y2Y1 108 aaPredicted RBP10.89□□□□□ -0.67
NEK4-201ENST00000233027 PTPRDP23468 1912 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 SBF1O95248 1867 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 LY96Q9Y6Y9 160 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 ZSWIM8A7E2V4 1837 aa10.89□□□□□ -0.67
NEK4-201ENST00000233027 SIGLEC9Q9Y336 463 aa10.88□□□□□ -0.67
NEK4-201ENST00000233027 LY6HO94772 140 aa10.88□□□□□ -0.67
NEK4-201ENST00000233027 IGKV1-6A0A0C4DH72 117 aa10.88□□□□□ -0.67
NEK4-201ENST00000233027 TDGF1P3P51864 188 aa10.88□□□□□ -0.67
NEK4-201ENST00000233027 TMEM238C9JI98 176 aa10.88□□□□□ -0.67
NEK4-201ENST00000233027 A0A087WWL8 130 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 GGTLC3B5MD39 225 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 WISP1O95388 367 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 TOMM40O96008 361 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 Q86TA4 180 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 MRPL27Q9P0M9 148 aaKnown RBP10.87□□□□□ -0.67
NEK4-201ENST00000233027 DPH3P1Q9H4G8 78 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 C5orf64Q2M2E5 130 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 STPG4Q8N801 248 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 C8orf49Q96NF6 230 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 MYLKQ15746 1914 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 COL8A2P25067 703 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 MDS2Q8NDY4 140 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 CYYR1Q96J86 154 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 GTSF1LQ9H1H1 148 aa10.87□□□□□ -0.67
NEK4-201ENST00000233027 UBE2V1Q13404 147 aa10.86□□□□□ -0.67
NEK4-201ENST00000233027 ESDP10768 282 aa10.86□□□□□ -0.67
NEK4-201ENST00000233027 ESPL1Q14674 2120 aa10.86□□□□□ -0.67
NEK4-201ENST00000233027 CRPP02741 224 aa10.86□□□□□ -0.67
NEK4-201ENST00000233027 ARMS2P0C7Q2 107 aa10.86□□□□□ -0.67
NEK4-201ENST00000233027 S100A7L2Q5SY68 101 aa10.86□□□□□ -0.67
NEK4-201ENST00000233027 ASPHD1Q5U4P2 390 aa10.86□□□□□ -0.67
NEK4-201ENST00000233027 SDK2Q58EX2 2172 aa10.86□□□□□ -0.67
NEK4-201ENST00000233027 TEX43Q6ZNM6 134 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 Q6ZS49 121 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 THADAQ6YHU6 1953 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 TMEM213A2RRL7 107 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 ZC2HC1BQ5TFG8 222 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 ZFAND6Q6FIF0 208 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 TRGV1A0A0A0MS02 117 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 MORN3Q6PF18 240 aaPredicted RBP10.85□□□□□ -0.67
NEK4-201ENST00000233027 FOXL2NBQ6ZUU3 175 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 PLXNA3P51805 1871 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 TRBV7-1A0A0A6YYK4 115 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 H3BUX3 64 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 SAP30O75446 220 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 SPOCK3Q9BQ16 436 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 CHAC1Q9BUX1 264 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 PHLDA1Q8WV24 401 aaPredicted RBP10.85□□□□□ -0.67
NEK4-201ENST00000233027 VWA8A3KMH1 1905 aa10.85□□□□□ -0.67
NEK4-201ENST00000233027 RPL35AP18077 110 aaKnown RBP10.84□□□□□ -0.67
NEK4-201ENST00000233027 OCIAD2Q56VL3 154 aa10.84□□□□□ -0.67
NEK4-201ENST00000233027 HIST1H4AP62805 103 aaKnown RBP10.84□□□□□ -0.67
NEK4-201ENST00000233027 ASCL4Q6XD76 172 aa10.84□□□□□ -0.67
NEK4-201ENST00000233027 ICE1Q9Y2F5 2266 aa10.84□□□□□ -0.67
NEK4-201ENST00000233027 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.84□□□□□ -0.67
NEK4-201ENST00000233027 CFHR2P36980 270 aa10.84□□□□□ -0.67
NEK4-201ENST00000233027 GAGE2BQ13066 116 aa10.84□□□□□ -0.67
NEK4-201ENST00000233027 GAGE2EQ4V326 116 aa10.84□□□□□ -0.67
NEK4-201ENST00000233027 GAGE2DQ9UEU5 116 aa10.84□□□□□ -0.67
NEK4-201ENST00000233027 ZNF726P1Q15940 193 aa10.84□□□□□ -0.67
NEK4-201ENST00000233027 TMEM86BQ8N661 226 aa10.84□□□□□ -0.67
NEK4-201ENST00000233027 PAX4O43316 350 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 C2orf82Q6UX34 121 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 A0A1W2PPI3 338 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 A8MWP6 167 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 PLEKHB2Q96CS7 222 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 GAGE12BA1L429 117 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 VCYO14598 125 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 MINOS1Q5TGZ0 78 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 C9orf139Q6ZV77 190 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 DLX4Q92988 240 aaPredicted RBP10.83□□□□□ -0.68
NEK4-201ENST00000233027 MINOS1-NBL1R4GNA1 71 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 EFNA4P52798 201 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 UBE2E2Q96LR5 201 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 SPXQ9BT56 116 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 PAX9P55771 341 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 LINC01559Q495D7 138 aa10.83□□□□□ -0.68
NEK4-201ENST00000233027 TRAV8-3A0A0A6YYJ7 113 aa10.82□□□□□ -0.68
NEK4-201ENST00000233027 ADAMTSL5Q6ZMM2 481 aa10.82□□□□□ -0.68
NEK4-201ENST00000233027 LINC00477Q96M19 166 aa10.82□□□□□ -0.68
NEK4-201ENST00000233027 RNF5Q99942 180 aa10.82□□□□□ -0.68
NEK4-201ENST00000233027 CST9LQ9H4G1 147 aa10.82□□□□□ -0.68
NEK4-201ENST00000233027 TNFRSF6BO95407 300 aa10.82□□□□□ -0.68
NEK4-201ENST00000233027 PRADC1Q9BSG0 188 aa10.82□□□□□ -0.68
NEK4-201ENST00000233027 LRRK1Q38SD2 2015 aa10.82□□□□□ -0.68
NEK4-201ENST00000233027 LIME1Q9H400 295 aa10.82□□□□□ -0.68
NEK4-201ENST00000233027 COX11Q9Y6N1 276 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms