RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 MBD6Q96DN6 1003 aa13.27□□□□□ -0.29
GAPDH-201ENST00000229239 RNF125Q96EQ8 232 aa13.27□□□□□ -0.29
GAPDH-201ENST00000229239 LINC00479Q96M42 142 aa13.27□□□□□ -0.29
GAPDH-201ENST00000229239 FOXC2Q99958 501 aa13.27□□□□□ -0.29
GAPDH-201ENST00000229239 SERTAD4Q9NUC0 356 aa13.27□□□□□ -0.29
GAPDH-201ENST00000229239 AMY1AP04745 511 aa13.26□□□□□ -0.29
GAPDH-201ENST00000229239 ADMP35318 185 aa13.26□□□□□ -0.29
GAPDH-201ENST00000229239 Q0VG73 95 aa13.26□□□□□ -0.29
GAPDH-201ENST00000229239 FBLN7Q53RD9 439 aa13.26□□□□□ -0.29
GAPDH-201ENST00000229239 Q8N9W7 124 aa13.26□□□□□ -0.29
GAPDH-201ENST00000229239 CMTM2Q8TAZ6 248 aa13.26□□□□□ -0.29
GAPDH-201ENST00000229239 ZNF492Q9P255 531 aa13.26□□□□□ -0.29
GAPDH-201ENST00000229239 SNURFLB1AK76 121 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 NDUFS8O00217 210 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 LTAP01374 205 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 ESDP10768 282 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 IER3P46695 156 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 VN1R17PQ8TDU5 208 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 AJUBAQ96IF1 538 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 MLST8Q9BVC4 326 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 C21orf62Q9NYP8 219 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 PRRC2AP48634 2157 aaKnown RBP13.25□□□□□ -0.29
GAPDH-201ENST00000229239 IGHV7-81A0A0B4J1V7 117 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 K7EQM0 130 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 IGHV4-39P01824 125 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 CRISP2P16562 243 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 CBLN1P23435 193 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 GNG5P63218 68 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 PAFAH1B2P68402 229 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 NDPQ00604 133 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 PDE6HQ13956 83 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 USF2Q15853 346 aaPredicted RBP13.25□□□□□ -0.29
GAPDH-201ENST00000229239 ARL6IP6Q8N6S5 226 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 C7orf69Q9H7B7 122 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 NAT8BQ9UHF3 227 aa13.25□□□□□ -0.29
GAPDH-201ENST00000229239 TRAV34A0A0B4J273 112 aa13.24□□□□□ -0.29
GAPDH-201ENST00000229239 SAA4P35542 130 aa13.24□□□□□ -0.29
GAPDH-201ENST00000229239 LEMD1Q68G75 181 aa13.24□□□□□ -0.29
GAPDH-201ENST00000229239 ATP5L2Q7Z4Y8 100 aa13.24□□□□□ -0.29
GAPDH-201ENST00000229239 NUDT10Q8NFP7 164 aa13.24□□□□□ -0.29
GAPDH-201ENST00000229239 TSKUQ8WUA8 353 aa13.24□□□□□ -0.29
GAPDH-201ENST00000229239 NUDT11Q96G61 164 aa13.24□□□□□ -0.29
GAPDH-201ENST00000229239 PIMREGQ9BSJ6 248 aa13.24□□□□□ -0.29
GAPDH-201ENST00000229239 ZNF331Q9NQX6 463 aaPredicted RBP13.24□□□□□ -0.29
GAPDH-201ENST00000229239 ZNF586Q9NXT0 402 aa13.24□□□□□ -0.29
GAPDH-201ENST00000229239 TRBV19A0A075B6N1 114 aa13.23□□□□□ -0.29
GAPDH-201ENST00000229239 NPFFO15130 113 aa13.23□□□□□ -0.29
GAPDH-201ENST00000229239 IL4P05112 153 aa13.23□□□□□ -0.29
GAPDH-201ENST00000229239 DEFB113Q30KQ7 82 aa13.23□□□□□ -0.29
GAPDH-201ENST00000229239 SOX21Q9Y651 276 aaPredicted RBP13.23□□□□□ -0.29
GAPDH-201ENST00000229239 SERTM2A0A1B0GWG4 89 aa13.23□□□□□ -0.29
GAPDH-201ENST00000229239 FAM231BA6NCW3 169 aa13.23□□□□□ -0.29
GAPDH-201ENST00000229239 IGLC2P0DOY2 106 aa13.23□□□□□ -0.29
GAPDH-201ENST00000229239 EGR2P11161 476 aaPredicted RBP13.23□□□□□ -0.29
GAPDH-201ENST00000229239 OR10J3Q5JRS4 329 aa13.23□□□□□ -0.29
GAPDH-201ENST00000229239 TMEM136Q6ZRR5 245 aa13.23□□□□□ -0.29
GAPDH-201ENST00000229239 FAM110DQ8TAY7 271 aaPredicted RBP13.23□□□□□ -0.29
GAPDH-201ENST00000229239 ARHGAP32A7KAX9 2087 aa13.22□□□□□ -0.29
GAPDH-201ENST00000229239 A8MWL6 223 aa13.22□□□□□ -0.29
GAPDH-201ENST00000229239 PAX8Q06710 450 aa13.22□□□□□ -0.29
GAPDH-201ENST00000229239 Q56UQ5 140 aa13.22□□□□□ -0.29
GAPDH-201ENST00000229239 KLF17Q5JT82 389 aaPredicted RBP13.22□□□□□ -0.29
GAPDH-201ENST00000229239 NHLRC2Q8NBF2 726 aa13.22□□□□□ -0.29
GAPDH-201ENST00000229239 CCL19Q99731 98 aa13.22□□□□□ -0.29
GAPDH-201ENST00000229239 GFRA4Q9GZZ7 299 aa13.22□□□□□ -0.29
GAPDH-201ENST00000229239 F8W735 103 aaPredicted RBP13.21□□□□□ -0.29
GAPDH-201ENST00000229239 TMEM75Q8N9X5 138 aa13.21□□□□□ -0.29
GAPDH-201ENST00000229239 DAZAP1Q96EP5 407 aaKnown RBP13.21□□□□□ -0.29
GAPDH-201ENST00000229239 PRSS22Q9GZN4 317 aa13.21□□□□□ -0.29
GAPDH-201ENST00000229239 ZFP30Q9Y2G7 519 aa13.21□□□□□ -0.29
GAPDH-201ENST00000229239 ZNF469Q96JG9 3925 aaPredicted RBP13.21□□□□□ -0.29
GAPDH-201ENST00000229239 MTORP42345 2549 aa13.21□□□□□ -0.3
GAPDH-201ENST00000229239 FBLL1A6NHQ2 334 aaKnown RBP13.21□□□□□ -0.3
GAPDH-201ENST00000229239 MRPS12O15235 138 aaKnown RBP13.21□□□□□ -0.3
GAPDH-201ENST00000229239 OR4B1Q8NGF8 309 aa13.21□□□□□ -0.3
GAPDH-201ENST00000229239 FAM168AQ92567 244 aa13.21□□□□□ -0.3
GAPDH-201ENST00000229239 RPP21Q9H633 154 aaKnown RBP13.21□□□□□ -0.3
GAPDH-201ENST00000229239 BEX4Q9NWD9 120 aaPredicted RBP13.21□□□□□ -0.3
GAPDH-201ENST00000229239 CENPVL3A0A0U1RRI6 287 aa13.2□□□□□ -0.3
GAPDH-201ENST00000229239 NDUFB8O95169 186 aa13.2□□□□□ -0.3
GAPDH-201ENST00000229239 SNRPCP09234 159 aaKnown RBP13.2□□□□□ -0.3
GAPDH-201ENST00000229239 RAB9AP51151 201 aa13.2□□□□□ -0.3
GAPDH-201ENST00000229239 TPPP2P59282 170 aa13.2□□□□□ -0.3
GAPDH-201ENST00000229239 IQCJQ1A5X6 159 aa13.2□□□□□ -0.3
GAPDH-201ENST00000229239 FAM120AOSQ5T036 256 aa13.2□□□□□ -0.3
GAPDH-201ENST00000229239 ATP6V0BQ99437 205 aa13.2□□□□□ -0.3
GAPDH-201ENST00000229239 VPS13CQ709C8 3753 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 C19orf71A6NCJ1 209 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 P01737 135 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 GZMBP10144 247 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 RPL7P18124 248 aaKnown RBP13.19□□□□□ -0.3
GAPDH-201ENST00000229239 TCL1AP56279 114 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 PKIAP61925 76 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 CTAG1AP78358 180 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 PSG9Q00887 426 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 Q86TA4 180 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 C10orf105Q8TEF2 133 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 FBXL7Q9UJT9 491 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 RPH3ALQ9UNE2 315 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 VWC2LB2RUY7 222 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms