RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 DAZAP1Q96EP5 407 aaKnown RBP12.91□□□□□ -0.34
LTBR-201ENST00000228918 RASL11BQ9BPW5 248 aa12.91□□□□□ -0.34
LTBR-201ENST00000228918 TRAV8-1A0A0A6YYK1 113 aa12.91□□□□□ -0.34
LTBR-201ENST00000228918 LY6LH3BQJ8 138 aa12.91□□□□□ -0.34
LTBR-201ENST00000228918 HOXB4P17483 251 aaPredicted RBP12.91□□□□□ -0.34
LTBR-201ENST00000228918 UNQ5815/PRO19632Q6UWF5 114 aa12.91□□□□□ -0.34
LTBR-201ENST00000228918 Q6ZVH6 145 aa12.91□□□□□ -0.34
LTBR-201ENST00000228918 RNF5Q99942 180 aa12.91□□□□□ -0.34
LTBR-201ENST00000228918 IGHV2-70DA0A0C4DH43 119 aa12.9□□□□□ -0.34
LTBR-201ENST00000228918 FAM231BA6NCW3 169 aa12.9□□□□□ -0.34
LTBR-201ENST00000228918 IGKV1-17P01599 117 aa12.9□□□□□ -0.34
LTBR-201ENST00000228918 IGLV2-11P01706 119 aa12.9□□□□□ -0.34
LTBR-201ENST00000228918 MAJINQ3KP22 176 aa12.9□□□□□ -0.34
LTBR-201ENST00000228918 EXOC3-AS1Q8N2X6 119 aa12.9□□□□□ -0.34
LTBR-201ENST00000228918 SRSF8Q9BRL6 282 aaKnown RBP12.9□□□□□ -0.34
LTBR-201ENST00000228918 PLGLAQ15195 96 aa12.9□□□□□ -0.35
LTBR-201ENST00000228918 FAM162BQ5T6X4 162 aa12.9□□□□□ -0.35
LTBR-201ENST00000228918 CIARTQ8N365 385 aaPredicted RBP12.9□□□□□ -0.35
LTBR-201ENST00000228918 DCHS1Q96JQ0 3298 aa12.89□□□□□ -0.35
LTBR-201ENST00000228918 HINT1P49773 126 aaPredicted RBP12.89□□□□□ -0.35
LTBR-201ENST00000228918 Q56UQ5 140 aa12.89□□□□□ -0.35
LTBR-201ENST00000228918 FAM120AOSQ5T036 256 aa12.89□□□□□ -0.35
LTBR-201ENST00000228918 GOLT1AQ6ZVE7 132 aa12.89□□□□□ -0.35
LTBR-201ENST00000228918 VKORC1Q9BQB6 163 aa12.89□□□□□ -0.35
LTBR-201ENST00000228918 TRBV6-1A0A0K0K1D8 114 aa12.88□□□□□ -0.35
LTBR-201ENST00000228918 K7EIM0 57 aa12.88□□□□□ -0.35
LTBR-201ENST00000228918 CD24P25063 80 aa12.88□□□□□ -0.35
LTBR-201ENST00000228918 COL8A1P27658 744 aa12.88□□□□□ -0.35
LTBR-201ENST00000228918 FOXA3P55318 350 aaPredicted RBP12.88□□□□□ -0.35
LTBR-201ENST00000228918 LDLRAD2Q5SZI1 272 aa12.88□□□□□ -0.35
LTBR-201ENST00000228918 C16orf54Q6UWD8 224 aa12.88□□□□□ -0.35
LTBR-201ENST00000228918 Q71RC1 249 aaPredicted RBP12.88□□□□□ -0.35
LTBR-201ENST00000228918 MUC15Q8N387 334 aa12.88□□□□□ -0.35
LTBR-201ENST00000228918 KIR3DL3Q8N743 410 aa12.88□□□□□ -0.35
LTBR-201ENST00000228918 ZZEF1O43149 2961 aa12.88□□□□□ -0.35
LTBR-201ENST00000228918 FBLN7Q53RD9 439 aa12.88□□□□□ -0.35
LTBR-201ENST00000228918 PRNTQ86SH4 94 aa12.88□□□□□ -0.35
LTBR-201ENST00000228918 TRAV9-2A0A087WT02 112 aa12.87□□□□□ -0.35
LTBR-201ENST00000228918 TIMM23O14925 209 aa12.87□□□□□ -0.35
LTBR-201ENST00000228918 TOX4O94842 621 aa12.87□□□□□ -0.35
LTBR-201ENST00000228918 PPBPP02775 128 aa12.87□□□□□ -0.35
LTBR-201ENST00000228918 SPATA12Q7Z6I5 190 aa12.87□□□□□ -0.35
LTBR-201ENST00000228918 LINC01560Q8TB33 94 aa12.87□□□□□ -0.35
LTBR-201ENST00000228918 SHANK2-AS3Q9BTD1 123 aa12.87□□□□□ -0.35
LTBR-201ENST00000228918 SCNM1Q9BWG6 230 aa12.87□□□□□ -0.35
LTBR-201ENST00000228918 CLEC5AQ9NY25 188 aa12.87□□□□□ -0.35
LTBR-201ENST00000228918 SH2D7A6NKC9 451 aaPredicted RBP12.87□□□□□ -0.35
LTBR-201ENST00000228918 H3BRN7 92 aa12.87□□□□□ -0.35
LTBR-201ENST00000228918 M0QZ24 198 aa12.87□□□□□ -0.35
LTBR-201ENST00000228918 APOHP02749 345 aaPredicted RBP12.87□□□□□ -0.35
LTBR-201ENST00000228918 TMEM190Q8WZ59 177 aa12.87□□□□□ -0.35
LTBR-201ENST00000228918 CHCHD1Q96BP2 118 aaKnown RBP12.87□□□□□ -0.35
LTBR-201ENST00000228918 ONECUT1Q9UBC0 465 aa12.87□□□□□ -0.35
LTBR-201ENST00000228918 TRBV19A0A075B6N1 114 aa12.86□□□□□ -0.35
LTBR-201ENST00000228918 LOC102724200A0A096LPH7 203 aaPredicted RBP12.86□□□□□ -0.35
LTBR-201ENST00000228918 OVOL3O00110 214 aa12.86□□□□□ -0.35
LTBR-201ENST00000228918 CNIH1O95406 144 aa12.86□□□□□ -0.35
LTBR-201ENST00000228918 ZNF672Q499Z4 452 aaPredicted RBP12.86□□□□□ -0.35
LTBR-201ENST00000228918 TMEM70Q9BUB7 260 aa12.86□□□□□ -0.35
LTBR-201ENST00000228918 TPRP12270 2363 aaKnown RBP12.86□□□□□ -0.35
LTBR-201ENST00000228918 IGHV1-24A0A0C4DH33 117 aa12.86□□□□□ -0.35
LTBR-201ENST00000228918 ZNF785A8K8V0 405 aa12.86□□□□□ -0.35
LTBR-201ENST00000228918 HAX1O00165 279 aa12.86□□□□□ -0.35
LTBR-201ENST00000228918 LIPFP07098 398 aa12.86□□□□□ -0.35
LTBR-201ENST00000228918 BPIFA4PQ86YQ2 179 aa12.86□□□□□ -0.35
LTBR-201ENST00000228918 TMEM75Q8N9X5 138 aa12.86□□□□□ -0.35
LTBR-201ENST00000228918 LY6G5BQ8NDX9 201 aa12.86□□□□□ -0.35
LTBR-201ENST00000228918 OR4F17Q8NGA8 305 aa12.86□□□□□ -0.35
LTBR-201ENST00000228918 CHEK1O14757 476 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 SIGLEC15Q6ZMC9 328 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 OR4C5Q8NGB2 326 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 C17orf77Q96MU5 243 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 NDFIP1Q9BT67 221 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 SPTBN2O15020 2390 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 NBR2O15453 112 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 CRXO43186 299 aaPredicted RBP12.85□□□□□ -0.35
LTBR-201ENST00000228918 HLA-DRB1P01911 266 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 IGLL1P15814 213 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 NBL1P41271 181 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 ZNF491Q8N8L2 437 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 ZC2HC1AQ96GY0 325 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 C1RLQ9NZP8 487 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 RNF24Q9Y225 148 aa12.85□□□□□ -0.35
LTBR-201ENST00000228918 TRAV30A0A087WSZ9 112 aa12.84□□□□□ -0.35
LTBR-201ENST00000228918 HTR1DP28221 377 aa12.84□□□□□ -0.35
LTBR-201ENST00000228918 CFHR4Q92496 578 aa12.84□□□□□ -0.35
LTBR-201ENST00000228918 RNF125Q96EQ8 232 aa12.84□□□□□ -0.35
LTBR-201ENST00000228918 TLN1Q9Y490 2541 aaKnown RBP12.84□□□□□ -0.35
LTBR-201ENST00000228918 MRPS12O15235 138 aaKnown RBP12.83□□□□□ -0.35
LTBR-201ENST00000228918 ANKHD1Q8IWZ3 2542 aaKnown RBP12.83□□□□□ -0.36
LTBR-201ENST00000228918 FAM90A27PA6NNH2 459 aa12.83□□□□□ -0.36
LTBR-201ENST00000228918 NDUFA3O95167 84 aa12.83□□□□□ -0.36
LTBR-201ENST00000228918 GRNP28799 593 aaKnown RBP12.83□□□□□ -0.36
LTBR-201ENST00000228918 RNF151Q2KHN1 245 aa12.83□□□□□ -0.36
LTBR-201ENST00000228918 LYPD1Q8N2G4 141 aa12.83□□□□□ -0.36
LTBR-201ENST00000228918 OR11H6Q8NGC7 330 aa12.83□□□□□ -0.36
LTBR-201ENST00000228918 DPM3Q9P2X0 92 aa12.83□□□□□ -0.36
LTBR-201ENST00000228918 MUC6Q6W4X9 2439 aa12.83□□□□□ -0.36
LTBR-201ENST00000228918 K7ENP7 123 aa12.82□□□□□ -0.36
LTBR-201ENST00000228918 IL4P05112 153 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms