RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 TMEM249Q2WGJ8 235 aa14.96□□□□□ -0.02
CLIP2-201ENST00000223398 CBY1Q9Y3M2 126 aa14.96□□□□□ -0.02
CLIP2-201ENST00000223398 NOTCH4Q99466 2003 aa14.96□□□□□ -0.02
CLIP2-201ENST00000223398 TRBV7-9A0A0J9YWB2 115 aa14.95□□□□□ -0.02
CLIP2-201ENST00000223398 C9orf139Q6ZV77 190 aa14.95□□□□□ -0.02
CLIP2-201ENST00000223398 DAZ1Q9NQZ3 744 aaKnown RBP14.95□□□□□ -0.02
CLIP2-201ENST00000223398 NOTCH3Q9UM47 2321 aa14.95□□□□□ -0.02
CLIP2-201ENST00000223398 DOCK10Q96BY6 2186 aa14.95□□□□□ -0.02
CLIP2-201ENST00000223398 IGHV3-64A0A075B6Q5 118 aa14.95□□□□□ -0.02
CLIP2-201ENST00000223398 NUDT11Q96G61 164 aa14.95□□□□□ -0.02
CLIP2-201ENST00000223398 FAM208BQ5VWN6 2430 aa14.95□□□□□ -0.02
CLIP2-201ENST00000223398 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.95□□□□□ -0.022e-6■■■□□ 17.3
CLIP2-201ENST00000223398 LRRK1Q38SD2 2015 aa14.95□□□□□ -0.02
CLIP2-201ENST00000223398 TANC1Q9C0D5 1861 aa14.95□□□□□ -0.02
CLIP2-201ENST00000223398 A0A0G2JRQ6 117 aa14.95□□□□□ -0.02
CLIP2-201ENST00000223398 ZNF138P52744 262 aa14.95□□□□□ -0.02
CLIP2-201ENST00000223398 LCN12Q6JVE5 192 aa14.95□□□□□ -0.02
CLIP2-201ENST00000223398 CD5P06127 495 aa14.94□□□□□ -0.02
CLIP2-201ENST00000223398 NCR2O95944 276 aa14.94□□□□□ -0.02
CLIP2-201ENST00000223398 STAG3L3P0CL85 134 aa14.94□□□□□ -0.02
CLIP2-201ENST00000223398 CYSLTR1Q9Y271 337 aa14.94□□□□□ -0.02
CLIP2-201ENST00000223398 CARHSP1Q9Y2V2 147 aaKnown RBP14.94□□□□□ -0.02
CLIP2-201ENST00000223398 A0A1W2PPI3 338 aa14.94□□□□□ -0.02
CLIP2-201ENST00000223398 SRSF1Q07955 248 aaKnown RBP eCLIP14.94□□□□□ -0.02
CLIP2-201ENST00000223398 NUDT10Q8NFP7 164 aa14.94□□□□□ -0.02
CLIP2-201ENST00000223398 WDR86Q86TI4 376 aa14.93□□□□□ -0.02
CLIP2-201ENST00000223398 ADMP35318 185 aa14.93□□□□□ -0.02
CLIP2-201ENST00000223398 TRAV8-1A0A0A6YYK1 113 aa14.93□□□□□ -0.02
CLIP2-201ENST00000223398 APOMO95445 188 aa14.93□□□□□ -0.02
CLIP2-201ENST00000223398 RNASE2P10153 161 aaKnown RBP14.93□□□□□ -0.02
CLIP2-201ENST00000223398 LOXP28300 417 aaPredicted RBP14.93□□□□□ -0.02
CLIP2-201ENST00000223398 OSTCQ9NRP0 149 aa14.93□□□□□ -0.02
CLIP2-201ENST00000223398 PSCAO43653 123 aa14.93□□□□□ -0.02
CLIP2-201ENST00000223398 INSP01308 110 aa14.93□□□□□ -0.02
CLIP2-201ENST00000223398 PTPRDP23468 1912 aa14.93□□□□□ -0.02
CLIP2-201ENST00000223398 Q8TCH9 128 aa14.92□□□□□ -0.02
CLIP2-201ENST00000223398 ZNF876PQ49A33 203 aa14.92□□□□□ -0.02
CLIP2-201ENST00000223398 MRPL16Q9NX20 251 aaKnown RBP14.92□□□□□ -0.02
CLIP2-201ENST00000223398 TCRAP04437 139 aa14.92□□□□□ -0.02
CLIP2-201ENST00000223398 FRMPD3Q5JV73 1810 aa14.92□□□□□ -0.02
CLIP2-201ENST00000223398 ERCC8Q13216 396 aa14.92□□□□□ -0.02
CLIP2-201ENST00000223398 TMEM14EPQ6UXP3 125 aa14.92□□□□□ -0.02
CLIP2-201ENST00000223398 ZNF562Q6V9R5 426 aa14.92□□□□□ -0.02
CLIP2-201ENST00000223398 LINC01619G3V211 115 aa14.92□□□□□ -0.02
CLIP2-201ENST00000223398 ETV2O00321 342 aaPredicted RBP14.92□□□□□ -0.02
CLIP2-201ENST00000223398 XCL2Q9UBD3 114 aa14.92□□□□□ -0.02
CLIP2-201ENST00000223398 TSC2P49815 1807 aa14.91□□□□□ -0.02
CLIP2-201ENST00000223398 SERF1AO75920 110 aa14.91□□□□□ -0.02
CLIP2-201ENST00000223398 TOMM40O96008 361 aa14.91□□□□□ -0.02
CLIP2-201ENST00000223398 TTC9CQ8N5M4 171 aa14.91□□□□□ -0.02
CLIP2-201ENST00000223398 DERL1Q9BUN8 251 aa14.91□□□□□ -0.02
CLIP2-201ENST00000223398 F2Z2F3 143 aa14.91□□□□□ -0.02
CLIP2-201ENST00000223398 NDUFB8O95169 186 aa14.91□□□□□ -0.02
CLIP2-201ENST00000223398 Q6ZRM9 215 aa14.91□□□□□ -0.02
CLIP2-201ENST00000223398 AGMATQ9BSE5 352 aa14.91□□□□□ -0.02
CLIP2-201ENST00000223398 C1QTNF4Q9BXJ3 329 aa14.91□□□□□ -0.02
CLIP2-201ENST00000223398 IGLV3-9A0A075B6K5 115 aa14.91□□□□□ -0.02
CLIP2-201ENST00000223398 C15orf62A8K5M9 175 aa14.91□□□□□ -0.02
CLIP2-201ENST00000223398 HOXA3O43365 443 aaPredicted RBP14.91□□□□□ -0.02
CLIP2-201ENST00000223398 IGKV1-6A0A0C4DH72 117 aa14.9□□□□□ -0.02
CLIP2-201ENST00000223398 RPP25LQ8N5L8 163 aaKnown RBP14.9□□□□□ -0.02
CLIP2-201ENST00000223398 ARFGEF3Q5TH69 2177 aa14.9□□□□□ -0.02
CLIP2-201ENST00000223398 ATRAIDQ6UW56 229 aa14.9□□□□□ -0.02
CLIP2-201ENST00000223398 TSKUQ8WUA8 353 aa14.9□□□□□ -0.02
CLIP2-201ENST00000223398 MED13LQ71F56 2210 aa14.9□□□□□ -0.02
CLIP2-201ENST00000223398 LYZL1Q6UWQ5 148 aa14.9□□□□□ -0.02
CLIP2-201ENST00000223398 MBD3L1Q8WWY6 194 aa14.9□□□□□ -0.02
CLIP2-201ENST00000223398 PCNX2A6NKB5 2137 aa14.89□□□□□ -0.03
CLIP2-201ENST00000223398 RPL36AP83881 106 aaKnown RBP14.89□□□□□ -0.03
CLIP2-201ENST00000223398 CFHR3Q02985 330 aa14.89□□□□□ -0.03
CLIP2-201ENST00000223398 RPL36ALQ969Q0 106 aaKnown RBP14.89□□□□□ -0.03
CLIP2-201ENST00000223398 SH2D1AO60880 128 aa14.89□□□□□ -0.03
CLIP2-201ENST00000223398 RNF182Q8N6D2 247 aa14.89□□□□□ -0.03
CLIP2-201ENST00000223398 LINC00469Q8N7U9 141 aa14.89□□□□□ -0.03
CLIP2-201ENST00000223398 SLX1AQ9BQ83 275 aa14.89□□□□□ -0.03
CLIP2-201ENST00000223398 GBF1Q92538 1859 aa14.89□□□□□ -0.03
CLIP2-201ENST00000223398 HELZP42694 1942 aaKnown RBP14.89□□□□□ -0.03
CLIP2-201ENST00000223398 LINC00477Q96M19 166 aa14.89□□□□□ -0.03
CLIP2-201ENST00000223398 SMIM13P0DJ93 91 aa14.89□□□□□ -0.03
CLIP2-201ENST00000223398 NRGNQ92686 78 aa14.88□□□□□ -0.03
CLIP2-201ENST00000223398 PTPRQQ9UMZ3 2332 aa14.88□□□□□ -0.03
CLIP2-201ENST00000223398 TRAV9-1A0A075B6T8 112 aa14.88□□□□□ -0.03
CLIP2-201ENST00000223398 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.88□□□□□ -0.03
CLIP2-201ENST00000223398 PLP1P60201 277 aa14.88□□□□□ -0.03
CLIP2-201ENST00000223398 A0A087WWC5 75 aa14.88□□□□□ -0.03
CLIP2-201ENST00000223398 IGLV1-44P01699 117 aa14.88□□□□□ -0.03
CLIP2-201ENST00000223398 A0A087WWL8 130 aa14.88□□□□□ -0.03
CLIP2-201ENST00000223398 FAM120AOSQ5T036 256 aa14.88□□□□□ -0.03
CLIP2-201ENST00000223398 NLRC5Q86WI3 1866 aa14.88□□□□□ -0.03
CLIP2-201ENST00000223398 HBDP02042 147 aa14.87□□□□□ -0.03
CLIP2-201ENST00000223398 C14orf178Q8N769 122 aaPredicted RBP14.87□□□□□ -0.03
CLIP2-201ENST00000223398 PHLDA1Q8WV24 401 aaPredicted RBP14.87□□□□□ -0.03
CLIP2-201ENST00000223398 C17orf58Q2M2W7 97 aa14.87□□□□□ -0.03
CLIP2-201ENST00000223398 ZGRF1Q86YA3 2104 aa14.87□□□□□ -0.03
CLIP2-201ENST00000223398 CTAG1AP78358 180 aa14.87□□□□□ -0.03
CLIP2-201ENST00000223398 ORMDL2Q53FV1 153 aa14.87□□□□□ -0.03
CLIP2-201ENST00000223398 NXT2Q9NPJ8 142 aaKnown RBP14.87□□□□□ -0.03
CLIP2-201ENST00000223398 RBMY1BA6NDE4 496 aaKnown RBP14.87□□□□□ -0.03
CLIP2-201ENST00000223398 RBMY1EA6NEQ0 496 aaKnown RBP14.87□□□□□ -0.03
CLIP2-201ENST00000223398 A8MXK9 166 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms