RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 BMI1P35226 326 aa11.28□□□□□ -0.6
RPA3-201ENST00000223129 RPL11P62913 178 aaKnown RBP11.28□□□□□ -0.6
RPA3-201ENST00000223129 OR2K2Q8NGT1 345 aa11.28□□□□□ -0.6
RPA3-201ENST00000223129 GRAMD2BQ96HH9 432 aa11.28□□□□□ -0.6
RPA3-201ENST00000223129 PRR25Q96S07 402 aa11.28□□□□□ -0.6
RPA3-201ENST00000223129 SCRT1Q9BWW7 348 aa11.28□□□□□ -0.6
RPA3-201ENST00000223129 SLC25A39Q9BZJ4 359 aaPredicted RBP11.28□□□□□ -0.6
RPA3-201ENST00000223129 TMEM231Q9H6L2 316 aa11.28□□□□□ -0.6
RPA3-201ENST00000223129 SLC25A22Q9H936 323 aa11.28□□□□□ -0.6
RPA3-201ENST00000223129 CYTL1Q9NRR1 136 aa11.28□□□□□ -0.6
RPA3-201ENST00000223129 ZNF256Q9Y2P7 627 aaPredicted RBP11.28□□□□□ -0.6
RPA3-201ENST00000223129 ZNF98A6NK75 572 aa11.27□□□□□ -0.61
RPA3-201ENST00000223129 C17orf112F2Z3M2 114 aa11.27□□□□□ -0.61
RPA3-201ENST00000223129 COX7A2P2O60397 106 aa11.27□□□□□ -0.61
RPA3-201ENST00000223129 GP9P14770 177 aa11.27□□□□□ -0.61
RPA3-201ENST00000223129 GBGT1Q8N5D6 347 aa11.27□□□□□ -0.61
RPA3-201ENST00000223129 GLMPQ8WWB7 406 aa11.27□□□□□ -0.61
RPA3-201ENST00000223129 DNAJC4Q9NNZ3 241 aa11.27□□□□□ -0.61
RPA3-201ENST00000223129 C10orf113Q5VZT2 155 aa11.26□□□□□ -0.61
RPA3-201ENST00000223129 LINC00305Q7Z4B0 112 aa11.26□□□□□ -0.61
RPA3-201ENST00000223129 TRAV25A0A0B4J276 109 aa11.26□□□□□ -0.61
RPA3-201ENST00000223129 H3BRN7 92 aa11.26□□□□□ -0.61
RPA3-201ENST00000223129 TEX46H3BTG2 121 aa11.26□□□□□ -0.61
RPA3-201ENST00000223129 TAAR5O14804 337 aa11.26□□□□□ -0.61
RPA3-201ENST00000223129 TFPI2P48307 235 aa11.26□□□□□ -0.61
RPA3-201ENST00000223129 MORN5Q5VZ52 161 aa11.26□□□□□ -0.61
RPA3-201ENST00000223129 ARPC5LQ9BPX5 153 aa11.26□□□□□ -0.61
RPA3-201ENST00000223129 SHANK2-AS3Q9BTD1 123 aa11.26□□□□□ -0.61
RPA3-201ENST00000223129 ELOA3CA0A087WX78 387 aaPredicted RBP11.25□□□□□ -0.61
RPA3-201ENST00000223129 BORCS7-ASMTA0A0B4J1R7 106 aa11.25□□□□□ -0.61
RPA3-201ENST00000223129 ATP6V0CP27449 155 aa11.25□□□□□ -0.61
RPA3-201ENST00000223129 FFAR4Q5NUL3 377 aa11.25□□□□□ -0.61
RPA3-201ENST00000223129 WFDC3Q8IUB2 231 aa11.25□□□□□ -0.61
RPA3-201ENST00000223129 OR8I2Q8N0Y5 310 aa11.25□□□□□ -0.61
RPA3-201ENST00000223129 OR1L4Q8NGR5 311 aa11.25□□□□□ -0.61
RPA3-201ENST00000223129 SH3BGRL3Q9H299 93 aa11.25□□□□□ -0.61
RPA3-201ENST00000223129 APOC3P02656 99 aa11.25□□□□□ -0.61
RPA3-201ENST00000223129 UQCC3Q6UW78 93 aa11.25□□□□□ -0.61
RPA3-201ENST00000223129 SIGLEC15Q6ZMC9 328 aa11.25□□□□□ -0.61
RPA3-201ENST00000223129 ZNF471Q9BX82 626 aaPredicted RBP11.25□□□□□ -0.61
RPA3-201ENST00000223129 MS4A6AQ9H2W1 248 aa11.25□□□□□ -0.61
RPA3-201ENST00000223129 AURKAIP1Q9NWT8 199 aaPredicted RBP11.25□□□□□ -0.61
RPA3-201ENST00000223129 ZMAT5Q9UDW3 170 aaKnown RBP11.25□□□□□ -0.61
RPA3-201ENST00000223129 TRAV5A0A0B4J249 113 aa11.24□□□□□ -0.61
RPA3-201ENST00000223129 JTBO76095 146 aa11.24□□□□□ -0.61
RPA3-201ENST00000223129 FAM74A1Q5RGS3 127 aa11.24□□□□□ -0.61
RPA3-201ENST00000223129 C1orf194Q5T5A4 169 aa11.24□□□□□ -0.61
RPA3-201ENST00000223129 STXBP6Q8NFX7 210 aa11.24□□□□□ -0.61
RPA3-201ENST00000223129 PFDN5Q99471 154 aa11.24□□□□□ -0.61
RPA3-201ENST00000223129 KCNIP2Q9NS61 270 aa11.24□□□□□ -0.61
RPA3-201ENST00000223129 DNASE2O00115 360 aaPredicted RBP11.23□□□□□ -0.61
RPA3-201ENST00000223129 CD5P06127 495 aa11.23□□□□□ -0.61
RPA3-201ENST00000223129 CD7P09564 240 aa11.23□□□□□ -0.61
RPA3-201ENST00000223129 SPATA31B1PQ5VZV4 182 aa11.23□□□□□ -0.61
RPA3-201ENST00000223129 GATAD1Q8WUU5 269 aa11.23□□□□□ -0.61
RPA3-201ENST00000223129 SPAG8Q99932 426 aaPredicted RBP11.23□□□□□ -0.61
RPA3-201ENST00000223129 SEPSECSQ9HD40 501 aaKnown RBP11.23□□□□□ -0.61
RPA3-201ENST00000223129 TIMM9Q9Y5J7 89 aa11.23□□□□□ -0.61
RPA3-201ENST00000223129 SMAD5-AS1Q9Y6J3 95 aa11.23□□□□□ -0.61
RPA3-201ENST00000223129 HELTA6NFD8 242 aa11.23□□□□□ -0.61
RPA3-201ENST00000223129 S100A7P31151 101 aa11.23□□□□□ -0.61
RPA3-201ENST00000223129 FAM78BQ5VT40 261 aa11.23□□□□□ -0.61
RPA3-201ENST00000223129 RAB19A4D1S5 217 aa11.22□□□□□ -0.61
RPA3-201ENST00000223129 DEFA6Q01524 100 aa11.22□□□□□ -0.61
RPA3-201ENST00000223129 ATRAIDQ6UW56 229 aa11.22□□□□□ -0.61
RPA3-201ENST00000223129 S100A7AQ86SG5 101 aa11.22□□□□□ -0.61
RPA3-201ENST00000223129 EIF3GO75821 320 aaKnown RBP eCLIP11.21□□□□□ -0.61
RPA3-201ENST00000223129 SNRPCP09234 159 aaKnown RBP11.21□□□□□ -0.61
RPA3-201ENST00000223129 CD81P60033 236 aa11.21□□□□□ -0.61
RPA3-201ENST00000223129 PAFAH1B2P68402 229 aa11.21□□□□□ -0.61
RPA3-201ENST00000223129 Q8N1Y9 231 aa11.21□□□□□ -0.61
RPA3-201ENST00000223129 FAM24BQ8N5W8 94 aa11.21□□□□□ -0.61
RPA3-201ENST00000223129 STOML3Q8TAV4 291 aa11.21□□□□□ -0.61
RPA3-201ENST00000223129 C17orf77Q96MU5 243 aa11.21□□□□□ -0.61
RPA3-201ENST00000223129 PSMG3Q9BT73 122 aaPredicted RBP11.21□□□□□ -0.61
RPA3-201ENST00000223129 RAB2AP61019 212 aa11.21□□□□□ -0.62
RPA3-201ENST00000223129 MIR17HGQ75NE6 70 aa11.21□□□□□ -0.62
RPA3-201ENST00000223129 GTSCR1Q86UQ5 136 aa11.21□□□□□ -0.62
RPA3-201ENST00000223129 CLRN3Q8NCR9 226 aa11.21□□□□□ -0.62
RPA3-201ENST00000223129 DCANP1Q8TF63 244 aa11.21□□□□□ -0.62
RPA3-201ENST00000223129 GNPNAT1Q96EK6 184 aaPredicted RBP11.21□□□□□ -0.62
RPA3-201ENST00000223129 OR4C46A6NHA9 309 aa11.2□□□□□ -0.62
RPA3-201ENST00000223129 K7EIL1 84 aa11.2□□□□□ -0.62
RPA3-201ENST00000223129 GALR1P47211 349 aa11.2□□□□□ -0.62
RPA3-201ENST00000223129 OR2G3Q8NGZ4 309 aa11.2□□□□□ -0.62
RPA3-201ENST00000223129 NKX6-2Q9C056 277 aaPredicted RBP11.2□□□□□ -0.62
RPA3-201ENST00000223129 WFDC10AQ9H1F0 79 aa11.2□□□□□ -0.62
RPA3-201ENST00000223129 NRN1Q9NPD7 142 aa11.2□□□□□ -0.62
RPA3-201ENST00000223129 MRPS12O15235 138 aaKnown RBP11.19□□□□□ -0.62
RPA3-201ENST00000223129 TPT1P13693 172 aaKnown RBP11.19□□□□□ -0.62
RPA3-201ENST00000223129 RPL7P18124 248 aaKnown RBP11.19□□□□□ -0.62
RPA3-201ENST00000223129 ACOT6Q3I5F7 207 aaPredicted RBP11.19□□□□□ -0.62
RPA3-201ENST00000223129 GPR82Q96P67 336 aa11.19□□□□□ -0.62
RPA3-201ENST00000223129 K7EQG2 157 aa11.19□□□□□ -0.62
RPA3-201ENST00000223129 SERF2P84101 59 aa11.19□□□□□ -0.62
RPA3-201ENST00000223129 OR10G4Q8NGN3 311 aa11.19□□□□□ -0.62
RPA3-201ENST00000223129 OR10G9Q8NGN4 311 aa11.19□□□□□ -0.62
RPA3-201ENST00000223129 OR10G7Q8NGN6 311 aa11.19□□□□□ -0.62
RPA3-201ENST00000223129 FUT9Q9Y231 359 aa11.19□□□□□ -0.62
RPA3-201ENST00000223129 SPP1P10451 314 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms