RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 ZNF25P17030 456 aaPredicted RBP11.59□□□□□ -0.55
CNOT3-201ENST00000221232 C5orf17Q8NAS9 161 aa11.59□□□□□ -0.55
CNOT3-201ENST00000221232 TPPP3Q9BW30 176 aa11.59□□□□□ -0.55
CNOT3-201ENST00000221232 HTR1DP28221 377 aa11.59□□□□□ -0.55
CNOT3-201ENST00000221232 FCGR2BP31994 310 aaPredicted RBP11.59□□□□□ -0.55
CNOT3-201ENST00000221232 SPATA45Q537H7 98 aa11.59□□□□□ -0.55
CNOT3-201ENST00000221232 FAM231DQ6ZW35 169 aa11.59□□□□□ -0.55
CNOT3-201ENST00000221232 MIEN1Q9BRT3 115 aa11.59□□□□□ -0.55
CNOT3-201ENST00000221232 RPP21Q9H633 154 aaKnown RBP11.59□□□□□ -0.55
CNOT3-201ENST00000221232 M0R2Z0 102 aa11.58□□□□□ -0.56
CNOT3-201ENST00000221232 LIPFP07098 398 aa11.58□□□□□ -0.56
CNOT3-201ENST00000221232 ZNF138P52744 262 aa11.58□□□□□ -0.56
CNOT3-201ENST00000221232 Q56UQ5 140 aa11.58□□□□□ -0.56
CNOT3-201ENST00000221232 TNFRSF14Q92956 283 aa11.58□□□□□ -0.56
CNOT3-201ENST00000221232 IL4P05112 153 aa11.58□□□□□ -0.56
CNOT3-201ENST00000221232 COL8A1P27658 744 aa11.58□□□□□ -0.56
CNOT3-201ENST00000221232 CLEC5AQ9NY25 188 aa11.58□□□□□ -0.56
CNOT3-201ENST00000221232 HRNRQ86YZ3 2850 aaPredicted RBP11.58□□□□□ -0.56
CNOT3-201ENST00000221232 M0R3E3 92 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 NDUFS7O75251 213 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 COTL1Q14019 142 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 COX19Q49B96 90 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 ALKBH7Q9BT30 221 aaPredicted RBP11.57□□□□□ -0.56
CNOT3-201ENST00000221232 MLST8Q9BVC4 326 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 SPTBN4Q9H254 2564 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 K7EIM0 57 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 TOMM40O96008 361 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 RAB4AP20338 218 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 TFPI2P48307 235 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 SSX8Q7RTT4 187 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 LY6LH3BQJ8 138 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 LBHQ53QV2 105 aaPredicted RBP11.57□□□□□ -0.56
CNOT3-201ENST00000221232 DPM3Q9P2X0 92 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 KLF12Q9Y4X4 402 aa11.57□□□□□ -0.56
CNOT3-201ENST00000221232 NCOR2Q9Y618 2525 aa11.56□□□□□ -0.56
CNOT3-201ENST00000221232 MCRIP2Q9BUT9 160 aaKnown RBP11.56□□□□□ -0.56
CNOT3-201ENST00000221232 CHD8Q9HCK8 2581 aa11.56□□□□□ -0.56
CNOT3-201ENST00000221232 MUC21A0A0G2JKD1 596 aa11.56□□□□□ -0.56
CNOT3-201ENST00000221232 MUC21A0A140T8X8 626 aa11.56□□□□□ -0.56
CNOT3-201ENST00000221232 A8MWL6 223 aa11.56□□□□□ -0.56
CNOT3-201ENST00000221232 H0Y8G0 127 aa11.56□□□□□ -0.56
CNOT3-201ENST00000221232 LTAP01374 205 aa11.56□□□□□ -0.56
CNOT3-201ENST00000221232 CSN3P07498 182 aa11.56□□□□□ -0.56
CNOT3-201ENST00000221232 CA7P43166 264 aa11.56□□□□□ -0.56
CNOT3-201ENST00000221232 MUC21Q5SSG8 566 aa11.56□□□□□ -0.56
CNOT3-201ENST00000221232 EBLN2Q6P2I7 272 aa11.56□□□□□ -0.56
CNOT3-201ENST00000221232 FMC1Q96HJ9 113 aa11.56□□□□□ -0.56
CNOT3-201ENST00000221232 C20orf144Q9BQM9 153 aa11.56□□□□□ -0.56
CNOT3-201ENST00000221232 ZFHX3Q15911 3703 aa11.55□□□□□ -0.56
CNOT3-201ENST00000221232 NBR2O15453 112 aa11.55□□□□□ -0.56
CNOT3-201ENST00000221232 HBBP68871 147 aa11.55□□□□□ -0.56
CNOT3-201ENST00000221232 LOC105371242A0A075B767 164 aa11.55□□□□□ -0.56
CNOT3-201ENST00000221232 TMSB15BA0A087X1C1 80 aa11.55□□□□□ -0.56
CNOT3-201ENST00000221232 IGFL4Q6B9Z1 124 aa11.55□□□□□ -0.56
CNOT3-201ENST00000221232 PVRIGQ6DKI7 326 aa11.55□□□□□ -0.56
CNOT3-201ENST00000221232 DYNAPQ8N1N2 210 aa11.55□□□□□ -0.56
CNOT3-201ENST00000221232 CHRDL1Q9BU40 450 aa11.55□□□□□ -0.56
CNOT3-201ENST00000221232 RAB1BQ9H0U4 201 aa11.55□□□□□ -0.56
CNOT3-201ENST00000221232 ADORA2A-AS1P86434 159 aa11.54□□□□□ -0.56
CNOT3-201ENST00000221232 SVIPQ8NHG7 77 aa11.54□□□□□ -0.56
CNOT3-201ENST00000221232 TXN2Q99757 166 aa11.54□□□□□ -0.56
CNOT3-201ENST00000221232 GNG7O60262 68 aa11.54□□□□□ -0.56
CNOT3-201ENST00000221232 LINC00173Q6ZV60 143 aa11.54□□□□□ -0.56
CNOT3-201ENST00000221232 Q86TA4 180 aa11.54□□□□□ -0.56
CNOT3-201ENST00000221232 WIPF2Q8TF74 440 aaPredicted RBP11.54□□□□□ -0.56
CNOT3-201ENST00000221232 OTORQ9NRC9 128 aa11.54□□□□□ -0.56
CNOT3-201ENST00000221232 MRPL27Q9P0M9 148 aaKnown RBP11.54□□□□□ -0.56
CNOT3-201ENST00000221232 CHEK1O14757 476 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 ZNF491Q8N8L2 437 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 TIMD4Q96H15 378 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 PRSS22Q9GZN4 317 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 C19orf71A6NCJ1 209 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 FAM181BA6NEQ2 426 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 IGLV2-11P01706 119 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 PLP1P60201 277 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 Q6ZN92 141 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 OR4F17Q8NGA8 305 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 ZC2HC1AQ96GY0 325 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 URB1-AS1Q96HZ7 61 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 TP73-AS1Q9UF72 201 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 A0A1B0GXF2 115 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 DMRTA1Q5VZB9 504 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 SPATA12Q7Z6I5 190 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 BPIFA4PQ86YQ2 179 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 RNF125Q96EQ8 232 aa11.53□□□□□ -0.56
CNOT3-201ENST00000221232 NDPQ00604 133 aa11.52□□□□□ -0.57
CNOT3-201ENST00000221232 OR4B1Q8NGF8 309 aa11.52□□□□□ -0.57
CNOT3-201ENST00000221232 TRBV19A0A075B6N1 114 aa11.52□□□□□ -0.57
CNOT3-201ENST00000221232 ZNF785A8K8V0 405 aa11.52□□□□□ -0.57
CNOT3-201ENST00000221232 OR2J3O76001 311 aa11.52□□□□□ -0.57
CNOT3-201ENST00000221232 RBPMS2Q6ZRY4 209 aaKnown RBP11.52□□□□□ -0.57
CNOT3-201ENST00000221232 CFHR4Q92496 578 aa11.52□□□□□ -0.57
CNOT3-201ENST00000221232 C8orf49Q96NF6 230 aa11.52□□□□□ -0.57
CNOT3-201ENST00000221232 MAP1AP78559 2803 aaPredicted RBP11.52□□□□□ -0.57
CNOT3-201ENST00000221232 OR2T8A6NH00 312 aa11.51□□□□□ -0.57
CNOT3-201ENST00000221232 HLA-DRB1P01911 266 aa11.51□□□□□ -0.57
CNOT3-201ENST00000221232 LY6G5BQ8NDX9 201 aa11.51□□□□□ -0.57
CNOT3-201ENST00000221232 SHANK2-AS3Q9BTD1 123 aa11.51□□□□□ -0.57
CNOT3-201ENST00000221232 CELSR1Q9NYQ6 3014 aa11.51□□□□□ -0.57
CNOT3-201ENST00000221232 ZFP36P26651 326 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms