RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 H3BQ85 93 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 FDCSPQ8NFU4 85 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 PHLDA1Q8WV24 401 aaPredicted RBP3.63□□□□□ -1.83
CHD9-201ENST00000219084 LEAP2Q969E1 77 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 IGHV2-26A0A0B4J1V2 119 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 GAGE12BA1L429 117 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 CTSBP07858 339 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 GATA3P23771 443 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 SSBP2P81877 361 aaPredicted RBP3.63□□□□□ -1.83
CHD9-201ENST00000219084 KLK15Q9H2R5 256 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 FNDC4Q9H6D8 234 aaPredicted RBP3.63□□□□□ -1.83
CHD9-201ENST00000219084 GFRA3O60609 400 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 IGHV1-8P0DP01 117 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 CSRP1P21291 193 aaKnown RBP3.62□□□□□ -1.83
CHD9-201ENST00000219084 HGFACQ04756 655 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 PYY3Q5JQD4 70 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 COLCA1Q6ZS62 124 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 WDR87Q6ZQQ6 2873 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 ARFGEF3Q5TH69 2177 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 IGHV1-18A0A0C4DH31 117 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.62□□□□□ -1.83
CHD9-201ENST00000219084 SMAD7O15105 426 aaKnown RBP3.62□□□□□ -1.83
CHD9-201ENST00000219084 LEPROTO15243 131 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 RNF224P0DH78 156 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 YPEL3P61236 119 aaPredicted RBP3.62□□□□□ -1.83
CHD9-201ENST00000219084 TMEM155Q4W5P6 130 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 WFDC3Q8IUB2 231 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 CGB1A6NKQ9 187 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 IGKV3-15P01624 115 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 CRPP02741 224 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 Q86TA4 180 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 PCSK5Q92824 1860 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 C15orf62A8K5M9 175 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 PATE3B3GLJ2 98 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 D6R8Y8 96 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 VDAC2P45880 294 aaPredicted RBP3.62□□□□□ -1.83
CHD9-201ENST00000219084 SRSF6Q13247 344 aaKnown RBP3.62□□□□□ -1.83
CHD9-201ENST00000219084 C11orf52Q96A22 123 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 SHISA9B4DS77 424 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 CD7P09564 240 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 ADCYAP1P18509 176 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 ZNF415Q09FC8 603 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 GUSBP1Q15486 140 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 SHANK2-AS3Q9BTD1 123 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 C1QTNF4Q9BXJ3 329 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 MED13Q9UHV7 2174 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 COL4A4P53420 1690 aaPredicted RBP3.62□□□□□ -1.83
CHD9-201ENST00000219084 IGKV1D-8A0A087WSZ0 117 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 TMEM178BH3BS89 294 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 THBDP07204 575 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 CD55P08174 381 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 CKS1BP61024 79 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 LINC00311Q8N616 119 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 PRSS22Q9GZN4 317 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 MEGF9Q9H1U4 602 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 IGKV1-12A0A0C4DH73 117 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 MYMXA0A1B0GTQ4 84 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 C9orf118A6NHY6 69 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 IGKV1D-12P01611 117 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 CELA3BP08861 270 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 CD28P10747 220 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 MALP21145 153 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 FHL1Q13642 323 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 TEX43Q6ZNM6 134 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 FAM216BQ8N7L0 139 aa3.62□□□□□ -1.83
CHD9-201ENST00000219084 PKDREJQ9NTG1 2253 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 RBAKDNA6NC62 111 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 KIR3DS1Q14943 382 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 RASL10AQ92737 203 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 ABHD17AQ96GS6 310 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 MBD3L4A6NDZ8 208 aaPredicted RBP3.61□□□□□ -1.83
CHD9-201ENST00000219084 MBD3L3A6NE82 208 aaPredicted RBP3.61□□□□□ -1.83
CHD9-201ENST00000219084 MBD3L5A6NJ08 208 aaPredicted RBP3.61□□□□□ -1.83
CHD9-201ENST00000219084 GNG5P63218 68 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 KLF5Q13887 457 aaPredicted RBP3.61□□□□□ -1.83
CHD9-201ENST00000219084 MST1LQ2TV78 715 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 Q5PR19 223 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 ZNF833PQ6ZTB9 187 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 MBD3L2Q8NHZ7 208 aaPredicted RBP3.61□□□□□ -1.83
CHD9-201ENST00000219084 SPTAN1Q13813 2472 aaKnown RBP3.61□□□□□ -1.83
CHD9-201ENST00000219084 IGHV1-3A0A0C4DH29 117 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 BUB1B-PAK6H3BSN5 160 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 RHODO00212 210 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 TFF2Q03403 129 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 VWC2Q2TAL6 325 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 CLEC19AQ6UXS0 136 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 C9orf106Q8NAJ2 232 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 Q8NFD4 153 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 CITED1Q99966 193 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 BEX4Q9NWD9 120 aaPredicted RBP3.61□□□□□ -1.83
CHD9-201ENST00000219084 ZNF319Q9P2F9 582 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 IGHV1-46P01743 117 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 C5orf64Q2M2E5 130 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 LGALS9BQ3B8N2 356 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 COA6Q5JTJ3 125 aaKnown RBP3.61□□□□□ -1.83
CHD9-201ENST00000219084 GFI1BQ5VTD9 330 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 LGALS9CQ6DKI2 356 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 LIME1Q9H400 295 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 SPRR3Q9UBC9 169 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 RAI1Q7Z5J4 1906 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms