RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 TMEM41BQ5BJD5 291 aa9.95□□□□□ -0.82
TIMP1-201ENST00000218388 OXLD1Q5BKU9 147 aa9.95□□□□□ -0.82
TIMP1-201ENST00000218388 GCSAMLQ5JQS6 135 aa9.95□□□□□ -0.82
TIMP1-201ENST00000218388 SIGLEC15Q6ZMC9 328 aa9.95□□□□□ -0.82
TIMP1-201ENST00000218388 OR10G4Q8NGN3 311 aa9.95□□□□□ -0.82
TIMP1-201ENST00000218388 OR10G9Q8NGN4 311 aa9.95□□□□□ -0.82
TIMP1-201ENST00000218388 OR10G7Q8NGN6 311 aa9.95□□□□□ -0.82
TIMP1-201ENST00000218388 FUT9Q9Y231 359 aa9.95□□□□□ -0.82
TIMP1-201ENST00000218388 BOLA2-SMG1P6H3BVE0 249 aa9.94□□□□□ -0.82
TIMP1-201ENST00000218388 TSPAN4O14817 238 aa9.94□□□□□ -0.82
TIMP1-201ENST00000218388 TAS2R45P59539 299 aa9.94□□□□□ -0.82
TIMP1-201ENST00000218388 SAMD5Q5TGI4 173 aa9.94□□□□□ -0.82
TIMP1-201ENST00000218388 BPIFA4PQ86YQ2 179 aa9.94□□□□□ -0.82
TIMP1-201ENST00000218388 TMEM61Q8N0U2 210 aa9.94□□□□□ -0.82
TIMP1-201ENST00000218388 SPAG8Q99932 426 aaPredicted RBP9.94□□□□□ -0.82
TIMP1-201ENST00000218388 RFNGQ9Y644 331 aa9.94□□□□□ -0.82
TIMP1-201ENST00000218388 UMAD1C9J7I0 102 aa9.93□□□□□ -0.82
TIMP1-201ENST00000218388 DNASE2O00115 360 aaPredicted RBP9.93□□□□□ -0.82
TIMP1-201ENST00000218388 ATF4P18848 351 aaPredicted RBP9.93□□□□□ -0.82
TIMP1-201ENST00000218388 CDC34P49427 236 aaPredicted RBP9.93□□□□□ -0.82
TIMP1-201ENST00000218388 MEOX2P50222 304 aa9.93□□□□□ -0.82
TIMP1-201ENST00000218388 RAB2AP61019 212 aa9.93□□□□□ -0.82
TIMP1-201ENST00000218388 GUCA2BQ16661 112 aa9.93□□□□□ -0.82
TIMP1-201ENST00000218388 KHDC3LQ587J8 217 aa9.93□□□□□ -0.82
TIMP1-201ENST00000218388 SAMD13Q5VXD3 122 aa9.93□□□□□ -0.82
TIMP1-201ENST00000218388 FAM90A2PQ658T7 463 aa9.93□□□□□ -0.82
TIMP1-201ENST00000218388 LEMD1Q68G75 181 aa9.93□□□□□ -0.82
TIMP1-201ENST00000218388 STXBP6Q8NFX7 210 aa9.93□□□□□ -0.82
TIMP1-201ENST00000218388 ACTR3CQ9C0K3 210 aaPredicted RBP9.93□□□□□ -0.82
TIMP1-201ENST00000218388 SEPSECSQ9HD40 501 aaKnown RBP9.93□□□□□ -0.82
TIMP1-201ENST00000218388 NOTCH3Q9UM47 2321 aa9.93□□□□□ -0.82
TIMP1-201ENST00000218388 TRAV2A0A0B4J234 112 aa9.92□□□□□ -0.82
TIMP1-201ENST00000218388 OR4C46A6NHA9 309 aa9.92□□□□□ -0.82
TIMP1-201ENST00000218388 ZNF785A8K8V0 405 aa9.92□□□□□ -0.82
TIMP1-201ENST00000218388 G3V4G9 280 aa9.92□□□□□ -0.82
TIMP1-201ENST00000218388 EGFEM1PQ0D2K5 195 aa9.92□□□□□ -0.82
TIMP1-201ENST00000218388 FAM122CQ6P4D5 195 aa9.92□□□□□ -0.82
TIMP1-201ENST00000218388 TMED6Q8WW62 240 aa9.92□□□□□ -0.82
TIMP1-201ENST00000218388 PHYHIPLQ96FC7 376 aa9.92□□□□□ -0.82
TIMP1-201ENST00000218388 NRN1Q9NPD7 142 aa9.92□□□□□ -0.82
TIMP1-201ENST00000218388 SELENOKQ9Y6D0 94 aa9.92□□□□□ -0.82
TIMP1-201ENST00000218388 IGKV3-7A0A075B6H7 116 aa9.91□□□□□ -0.82
TIMP1-201ENST00000218388 RAB5CP51148 216 aa9.91□□□□□ -0.82
TIMP1-201ENST00000218388 MORN5Q5VZ52 161 aa9.91□□□□□ -0.82
TIMP1-201ENST00000218388 DPPA3Q6W0C5 159 aa9.91□□□□□ -0.82
TIMP1-201ENST00000218388 MIR17HGQ75NE6 70 aa9.91□□□□□ -0.82
TIMP1-201ENST00000218388 MS4A6AQ9H2W1 248 aa9.91□□□□□ -0.82
TIMP1-201ENST00000218388 RPRMQ9NS64 109 aa9.91□□□□□ -0.82
TIMP1-201ENST00000218388 TMEM14CQ9P0S9 112 aa9.91□□□□□ -0.82
TIMP1-201ENST00000218388 ZNF256Q9Y2P7 627 aaPredicted RBP9.91□□□□□ -0.82
TIMP1-201ENST00000218388 DNHD1Q96M86 4753 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 A0A087X0K7 114 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 TRAV5A0A0B4J249 113 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 CTXND1A0A1B0GTU2 59 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 IZUMO1RA6ND01 250 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 OR7C2O60412 319 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 GP9P14770 177 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 GUK1Q16774 197 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 SPATA31B1PQ5VZV4 182 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 PQLC2Q6ZP29 291 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 GTSCR1Q86UQ5 136 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 GBGT1Q8N5D6 347 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 RPP25LQ8N5L8 163 aaKnown RBP9.9□□□□□ -0.82
TIMP1-201ENST00000218388 SLC25A2Q9BXI2 301 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 OR51M1Q9H341 326 aa9.9□□□□□ -0.82
TIMP1-201ENST00000218388 ID1P41134 155 aa9.89□□□□□ -0.83
TIMP1-201ENST00000218388 TFPI2P48307 235 aa9.89□□□□□ -0.83
TIMP1-201ENST00000218388 CMC4P56277 68 aaPredicted RBP9.89□□□□□ -0.83
TIMP1-201ENST00000218388 LCN15Q6UWW0 184 aa9.89□□□□□ -0.83
TIMP1-201ENST00000218388 WFDC3Q8IUB2 231 aa9.89□□□□□ -0.83
TIMP1-201ENST00000218388 LRRC20Q8TCA0 184 aa9.89□□□□□ -0.83
TIMP1-201ENST00000218388 RAB24Q969Q5 203 aa9.89□□□□□ -0.83
TIMP1-201ENST00000218388 PAXXQ9BUH6 204 aa9.89□□□□□ -0.83
TIMP1-201ENST00000218388 CMYA5Q8N3K9 4069 aa9.88□□□□□ -0.83
TIMP1-201ENST00000218388 STAG3L2P0CL84 134 aa9.88□□□□□ -0.83
TIMP1-201ENST00000218388 STAG3L3P0CL85 134 aa9.88□□□□□ -0.83
TIMP1-201ENST00000218388 HIST1H1EP10412 219 aaKnown RBP9.88□□□□□ -0.83
TIMP1-201ENST00000218388 SNRPD3P62318 126 aaKnown RBP9.88□□□□□ -0.83
TIMP1-201ENST00000218388 UBE2L3P68036 154 aaKnown RBP9.88□□□□□ -0.83
TIMP1-201ENST00000218388 BEAN1Q3B7T3 259 aa9.88□□□□□ -0.83
TIMP1-201ENST00000218388 KPRPQ5T749 579 aaPredicted RBP9.88□□□□□ -0.83
TIMP1-201ENST00000218388 FAM213BQ8TBF2 198 aa9.88□□□□□ -0.83
TIMP1-201ENST00000218388 FAM167A-AS1Q96KT0 104 aa9.88□□□□□ -0.83
TIMP1-201ENST00000218388 HRH4Q9H3N8 390 aa9.88□□□□□ -0.83
TIMP1-201ENST00000218388 SMAD5-AS1Q9Y6J3 95 aa9.88□□□□□ -0.83
TIMP1-201ENST00000218388 SORL1Q92673 2214 aa9.88□□□□□ -0.83
TIMP1-201ENST00000218388 PKD1L1Q8TDX9 2849 aa9.88□□□□□ -0.83
TIMP1-201ENST00000218388 K7EQG2 157 aa9.87□□□□□ -0.83
TIMP1-201ENST00000218388 MRPS12O15235 138 aaKnown RBP9.87□□□□□ -0.83
TIMP1-201ENST00000218388 CXorf1O96002 111 aa9.87□□□□□ -0.83
TIMP1-201ENST00000218388 IGLC2P0DOY2 106 aa9.87□□□□□ -0.83
TIMP1-201ENST00000218388 PYYP10082 97 aa9.87□□□□□ -0.83
TIMP1-201ENST00000218388 PSMB3P49720 205 aa9.87□□□□□ -0.83
TIMP1-201ENST00000218388 SULT1A2P50226 295 aa9.87□□□□□ -0.83
TIMP1-201ENST00000218388 PDE6HQ13956 83 aa9.87□□□□□ -0.83
TIMP1-201ENST00000218388 DCANP1Q8TF63 244 aa9.87□□□□□ -0.83
TIMP1-201ENST00000218388 RNF141Q8WVD5 230 aa9.87□□□□□ -0.83
TIMP1-201ENST00000218388 C16orf92Q96LL3 132 aa9.87□□□□□ -0.83
TIMP1-201ENST00000218388 SLC50A1Q9BRV3 221 aa9.87□□□□□ -0.83
TIMP1-201ENST00000218388 MAP1LC3B2A6NCE7 125 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms