RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 DEFB136Q30KP8 78 aa11.13□□□□□ -0.63
SIX4-201ENST00000216513 FABP2P12104 132 aa11.13□□□□□ -0.63
SIX4-201ENST00000216513 RNF126Q9BV68 326 aa11.13□□□□□ -0.63
SIX4-201ENST00000216513 GGACTQ9BVM4 153 aa11.13□□□□□ -0.63
SIX4-201ENST00000216513 TRAV21A0A0B4J279 112 aa11.13□□□□□ -0.63
SIX4-201ENST00000216513 APOHP02749 345 aaPredicted RBP11.13□□□□□ -0.63
SIX4-201ENST00000216513 CACNG7P62955 275 aa11.13□□□□□ -0.63
SIX4-201ENST00000216513 MYLKQ15746 1914 aa11.13□□□□□ -0.63
SIX4-201ENST00000216513 LTBP2Q14767 1821 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 IGKV2-40A0A087WW87 121 aaPredicted RBP11.12□□□□□ -0.63
SIX4-201ENST00000216513 H0YIZ8 118 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 IGKV2D-40P01614 121 aaPredicted RBP11.12□□□□□ -0.63
SIX4-201ENST00000216513 NTF4P34130 210 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 ZNF506Q5JVG8 444 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 CCL24O00175 119 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 EREGO14944 169 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 HOXB4P17483 251 aaPredicted RBP11.12□□□□□ -0.63
SIX4-201ENST00000216513 CTAG1AP78358 180 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 EFNB1P98172 346 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 TMEM144Q7Z5S9 345 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 OR10AG1Q8NH19 301 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 MT-ND6P03923 174 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 TCTEX1D4Q5JR98 221 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 CIARTQ8N365 385 aaPredicted RBP11.12□□□□□ -0.63
SIX4-201ENST00000216513 WISP2O76076 250 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 REC114Q7Z4M0 266 aa11.12□□□□□ -0.63
SIX4-201ENST00000216513 KIAA2026Q5HYC2 2103 aa11.11□□□□□ -0.63
SIX4-201ENST00000216513 PSG1P11464 419 aa11.11□□□□□ -0.63
SIX4-201ENST00000216513 FOLR2P14207 255 aa11.11□□□□□ -0.63
SIX4-201ENST00000216513 C8orf86Q6ZUL3 223 aa11.11□□□□□ -0.63
SIX4-201ENST00000216513 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.11□□□□□ -0.63
SIX4-201ENST00000216513 CIRBPQ14011 172 aaKnown RBP11.11□□□□□ -0.63
SIX4-201ENST00000216513 C22orf46C9J442 243 aa11.11□□□□□ -0.63
SIX4-201ENST00000216513 PEX7O00628 323 aa11.11□□□□□ -0.63
SIX4-201ENST00000216513 CGB3P0DN86 165 aa11.11□□□□□ -0.63
SIX4-201ENST00000216513 EXOC3-AS1Q8N2X6 119 aa11.11□□□□□ -0.63
SIX4-201ENST00000216513 LINC00477Q96M19 166 aa11.11□□□□□ -0.63
SIX4-201ENST00000216513 A0A1B0GUS0 222 aa11.1□□□□□ -0.63
SIX4-201ENST00000216513 IGKV1-16P04430 117 aa11.1□□□□□ -0.63
SIX4-201ENST00000216513 LBHQ53QV2 105 aaPredicted RBP11.1□□□□□ -0.63
SIX4-201ENST00000216513 FOXL2NBQ6ZUU3 175 aa11.1□□□□□ -0.63
SIX4-201ENST00000216513 SRRM4A7MD48 611 aaKnown RBP11.1□□□□□ -0.63
SIX4-201ENST00000216513 A0A1B0GWJ7 208 aa11.1□□□□□ -0.63
SIX4-201ENST00000216513 TYMSP04818 313 aa11.1□□□□□ -0.63
SIX4-201ENST00000216513 LINC00469Q8N7U9 141 aa11.1□□□□□ -0.63
SIX4-201ENST00000216513 LRTM2Q8N967 370 aa11.1□□□□□ -0.63
SIX4-201ENST00000216513 SLC25A34Q6PIV7 304 aa11.1□□□□□ -0.63
SIX4-201ENST00000216513 C2orf88Q9BSF0 95 aa11.1□□□□□ -0.63
SIX4-201ENST00000216513 DERL1Q9BUN8 251 aa11.1□□□□□ -0.63
SIX4-201ENST00000216513 OTORQ9NRC9 128 aa11.1□□□□□ -0.63
SIX4-201ENST00000216513 IGHV2-70P01814 119 aa11.09□□□□□ -0.63
SIX4-201ENST00000216513 SCRT1Q9BWW7 348 aa11.09□□□□□ -0.63
SIX4-201ENST00000216513 SPRY4Q9C004 299 aa11.09□□□□□ -0.63
SIX4-201ENST00000216513 ADMP35318 185 aa11.09□□□□□ -0.63
SIX4-201ENST00000216513 LY6G6FQ5SQ64 297 aa11.09□□□□□ -0.63
SIX4-201ENST00000216513 SOX21Q9Y651 276 aaPredicted RBP11.09□□□□□ -0.63
SIX4-201ENST00000216513 PMS2P5A8MQ11 134 aa11.09□□□□□ -0.63
SIX4-201ENST00000216513 HIGD1CA8MV81 97 aa11.09□□□□□ -0.63
SIX4-201ENST00000216513 C9orf66Q5T8R8 295 aa11.09□□□□□ -0.63
SIX4-201ENST00000216513 ALKBH7Q9BT30 221 aaPredicted RBP11.09□□□□□ -0.63
SIX4-201ENST00000216513 NUDT11Q96G61 164 aa11.09□□□□□ -0.63
SIX4-201ENST00000216513 LINC00473A8K010 186 aa11.08□□□□□ -0.64
SIX4-201ENST00000216513 ZNF562Q6V9R5 426 aa11.08□□□□□ -0.64
SIX4-201ENST00000216513 ZNF524Q96C55 264 aa11.08□□□□□ -0.64
SIX4-201ENST00000216513 NAA38Q9BRA0 125 aaKnown RBP11.08□□□□□ -0.64
SIX4-201ENST00000216513 TMEM70Q9BUB7 260 aa11.08□□□□□ -0.64
SIX4-201ENST00000216513 FABP5P3A8MUU1 101 aa11.08□□□□□ -0.64
SIX4-201ENST00000216513 NCR2O95944 276 aa11.08□□□□□ -0.64
SIX4-201ENST00000216513 HBBP68871 147 aa11.08□□□□□ -0.64
SIX4-201ENST00000216513 PRELID3AQ96N28 172 aa11.08□□□□□ -0.64
SIX4-201ENST00000216513 SMDT1Q9H4I9 107 aa11.08□□□□□ -0.64
SIX4-201ENST00000216513 GTF3C1Q12789 2109 aa11.08□□□□□ -0.64
SIX4-201ENST00000216513 LURAP1LQ8IV03 231 aa11.08□□□□□ -0.64
SIX4-201ENST00000216513 FMC1Q96HJ9 113 aa11.08□□□□□ -0.64
SIX4-201ENST00000216513 FAM89BQ8N5H3 189 aa11.07□□□□□ -0.64
SIX4-201ENST00000216513 FER1L6-AS1Q8NA97 138 aa11.07□□□□□ -0.64
SIX4-201ENST00000216513 NPIPB5A8MRT5 1133 aa11.07□□□□□ -0.64
SIX4-201ENST00000216513 SRP19P09132 144 aaKnown RBP11.07□□□□□ -0.64
SIX4-201ENST00000216513 TMEM136Q6ZRR5 245 aa11.07□□□□□ -0.64
SIX4-201ENST00000216513 Q8TAT8 98 aa11.07□□□□□ -0.64
SIX4-201ENST00000216513 PTPN13Q12923 2485 aa11.07□□□□□ -0.64
SIX4-201ENST00000216513 TEX36Q5VZQ5 186 aa11.07□□□□□ -0.64
SIX4-201ENST00000216513 UQCR10Q9UDW1 63 aa11.07□□□□□ -0.64
SIX4-201ENST00000216513 APOMO95445 188 aa11.07□□□□□ -0.64
SIX4-201ENST00000216513 NAPSAO96009 420 aa11.07□□□□□ -0.64
SIX4-201ENST00000216513 PARD6GQ9BYG4 376 aaPredicted RBP11.07□□□□□ -0.64
SIX4-201ENST00000216513 DOCK10Q96BY6 2186 aa11.06□□□□□ -0.64
SIX4-201ENST00000216513 WDR86Q86TI4 376 aa11.06□□□□□ -0.64
SIX4-201ENST00000216513 ZNF414Q96IQ9 312 aa11.06□□□□□ -0.64
SIX4-201ENST00000216513 J3QRE1 110 aa11.06□□□□□ -0.64
SIX4-201ENST00000216513 DNAL4O96015 105 aa11.06□□□□□ -0.64
SIX4-201ENST00000216513 MPZP25189 248 aa11.06□□□□□ -0.64
SIX4-201ENST00000216513 SEM1Q6ZVN7 128 aa11.06□□□□□ -0.64
SIX4-201ENST00000216513 SCGB3A1Q96QR1 104 aa11.06□□□□□ -0.64
SIX4-201ENST00000216513 NDUFB8O95169 186 aa11.06□□□□□ -0.64
SIX4-201ENST00000216513 PLXNA2O75051 1894 aa11.06□□□□□ -0.64
SIX4-201ENST00000216513 ELANEP08246 267 aa11.06□□□□□ -0.64
SIX4-201ENST00000216513 PAPPA-AS1Q5QFB9 102 aa11.06□□□□□ -0.64
SIX4-201ENST00000216513 SPRNQ5BIV9 151 aa11.05□□□□□ -0.64
SIX4-201ENST00000216513 ADARB2-AS1A8MUL3 147 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms