RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 C9orf139Q6ZV77 190 aa14.43□□□□□ -0.1
CTSA-201ENST00000191018 OR4F17Q8NGA8 305 aa14.43□□□□□ -0.1
CTSA-201ENST00000191018 TMEM190Q8WZ59 177 aa14.43□□□□□ -0.1
CTSA-201ENST00000191018 FOXL1Q12952 345 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 OR5I1Q13606 314 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 HIST2H2BCQ6DN03 193 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 KCNIP4Q6PIL6 250 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 ATG101Q9BSB4 218 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 ZFAND3Q9H8U3 227 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 BIN3Q9NQY0 253 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 ZANQ9Y493 2812 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 H3BUA1 57 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 ISLRO14498 428 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 IGHV4-59P01825 116 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 IER3P46695 156 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 ATP5G2Q06055 141 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 CLEC19AQ6UXS0 136 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 Q6ZS46 218 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 RABAC1Q9UI14 185 aa14.42□□□□□ -0.1
CTSA-201ENST00000191018 A0A1W2PPQ1 181 aa14.41□□□□□ -0.1
CTSA-201ENST00000191018 BMPR1BO00238 502 aa14.41□□□□□ -0.1
CTSA-201ENST00000191018 TCRAP04437 139 aa14.41□□□□□ -0.1
CTSA-201ENST00000191018 TOMM20LQ6UXN7 152 aa14.41□□□□□ -0.1
CTSA-201ENST00000191018 LYPD1Q8N2G4 141 aa14.41□□□□□ -0.1
CTSA-201ENST00000191018 C17orf77Q96MU5 243 aa14.41□□□□□ -0.1
CTSA-201ENST00000191018 SRD5A3Q9H8P0 318 aa14.41□□□□□ -0.1
CTSA-201ENST00000191018 ZNF580Q9UK33 172 aa14.41□□□□□ -0.1
CTSA-201ENST00000191018 NBPF19A0A087WUL8 3843 aa14.4□□□□□ -0.1
CTSA-201ENST00000191018 TRAV34A0A0B4J273 112 aa14.4□□□□□ -0.1
CTSA-201ENST00000191018 AP4M1O00189 453 aa14.4□□□□□ -0.1
CTSA-201ENST00000191018 TYMSP04818 313 aa14.4□□□□□ -0.1
CTSA-201ENST00000191018 NOL4LQ96MY1 436 aaPredicted RBP14.4□□□□□ -0.1
CTSA-201ENST00000191018 OSTCQ9NRP0 149 aa14.4□□□□□ -0.1
CTSA-201ENST00000191018 V9GYV3 84 aa14.4□□□□□ -0.1
CTSA-201ENST00000191018 PHOX2AO14813 284 aa14.4□□□□□ -0.1
CTSA-201ENST00000191018 TRGV3P03979 118 aa14.4□□□□□ -0.1
CTSA-201ENST00000191018 TRGC2P03986 189 aa14.4□□□□□ -0.1
CTSA-201ENST00000191018 FAM3BP58499 235 aaPredicted RBP14.4□□□□□ -0.1
CTSA-201ENST00000191018 ERVFC1-1P60608 527 aa14.4□□□□□ -0.1
CTSA-201ENST00000191018 SIGLEC15Q6ZMC9 328 aa14.4□□□□□ -0.1
CTSA-201ENST00000191018 EXOC3-AS1Q8N2X6 119 aa14.4□□□□□ -0.1
CTSA-201ENST00000191018 IGHV3-35A0A0C4DH35 117 aa14.39□□□□□ -0.11
CTSA-201ENST00000191018 S100A9P06702 114 aaKnown RBP14.39□□□□□ -0.11
CTSA-201ENST00000191018 PDE6HQ13956 83 aa14.39□□□□□ -0.11
CTSA-201ENST00000191018 BAGE2Q86Y30 109 aa14.39□□□□□ -0.11
CTSA-201ENST00000191018 OR5R1Q8NH85 324 aa14.39□□□□□ -0.11
CTSA-201ENST00000191018 SMIM12Q96EX1 92 aa14.39□□□□□ -0.11
CTSA-201ENST00000191018 C5orf52A6NGY3 159 aa14.38□□□□□ -0.11
CTSA-201ENST00000191018 S100A7P31151 101 aa14.38□□□□□ -0.11
CTSA-201ENST00000191018 UBE2G1P62253 170 aa14.38□□□□□ -0.11
CTSA-201ENST00000191018 CFHR3Q02985 330 aa14.38□□□□□ -0.11
CTSA-201ENST00000191018 CYB5R2Q6BCY4 276 aa14.38□□□□□ -0.11
CTSA-201ENST00000191018 FMC1Q96HJ9 113 aa14.38□□□□□ -0.11
CTSA-201ENST00000191018 SAV1Q9H4B6 383 aaPredicted RBP14.38□□□□□ -0.11
CTSA-201ENST00000191018 IL36BQ9NZH7 164 aa14.38□□□□□ -0.11
CTSA-201ENST00000191018 PPP5D1E7EU14 171 aa14.38□□□□□ -0.11
CTSA-201ENST00000191018 SLC17A3O00476 420 aa14.38□□□□□ -0.11
CTSA-201ENST00000191018 RPL7P18124 248 aaKnown RBP14.38□□□□□ -0.11
CTSA-201ENST00000191018 BTF3L4Q96K17 158 aa14.38□□□□□ -0.11
CTSA-201ENST00000191018 RNASE7Q9H1E1 156 aaKnown RBP14.38□□□□□ -0.11
CTSA-201ENST00000191018 CLPSL1A2RUU4 121 aa14.37□□□□□ -0.11
CTSA-201ENST00000191018 IGLV1-40P01703 118 aa14.37□□□□□ -0.11
CTSA-201ENST00000191018 MGST1P10620 155 aaKnown RBP14.37□□□□□ -0.11
CTSA-201ENST00000191018 TPPP2P59282 170 aa14.37□□□□□ -0.11
CTSA-201ENST00000191018 Q6YL49 198 aa14.37□□□□□ -0.11
CTSA-201ENST00000191018 NHLRC2Q8NBF2 726 aa14.37□□□□□ -0.11
CTSA-201ENST00000191018 GPR82Q96P67 336 aa14.37□□□□□ -0.11
CTSA-201ENST00000191018 MLST8Q9BVC4 326 aa14.37□□□□□ -0.11
CTSA-201ENST00000191018 GNB4Q9HAV0 340 aa14.37□□□□□ -0.11
CTSA-201ENST00000191018 RPH3ALQ9UNE2 315 aa14.37□□□□□ -0.11
CTSA-201ENST00000191018 S100A6P06703 90 aa14.36□□□□□ -0.11
CTSA-201ENST00000191018 SNRPEP62304 92 aaKnown RBP14.36□□□□□ -0.11
CTSA-201ENST00000191018 RELQ04864 619 aaPredicted RBP14.36□□□□□ -0.11
CTSA-201ENST00000191018 IBA57Q5T440 356 aaKnown RBP14.36□□□□□ -0.11
CTSA-201ENST00000191018 FAM231DQ6ZW35 169 aa14.36□□□□□ -0.11
CTSA-201ENST00000191018 CMTM2Q8TAZ6 248 aa14.36□□□□□ -0.11
CTSA-201ENST00000191018 USMG5Q96IX5 58 aa14.36□□□□□ -0.11
CTSA-201ENST00000191018 PRDM13Q9H4Q3 707 aa14.36□□□□□ -0.11
CTSA-201ENST00000191018 TRAV9-1A0A075B6T8 112 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 IGHV3OR16-8A0A075B7F1 116 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 LTAP01374 205 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 SMAD5-AS1Q9Y6J3 95 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 BUB3O43684 328 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 HIST1H2BKO60814 126 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 IGLV2-11P01706 119 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 HIST1H2BJP06899 126 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 HIST1H2BOP23527 126 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 HIST1H2BBP33778 126 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 RAB9AP51151 201 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 HIST1H2BDP58876 126 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 RPL15P61313 204 aaKnown RBP14.35□□□□□ -0.11
CTSA-201ENST00000191018 HIST1H2BCP62807 126 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 HIST2H2BEQ16778 126 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.35□□□□□ -0.11
CTSA-201ENST00000191018 OR8I2Q8N0Y5 310 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 WFDC11Q8NEX6 87 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 FRZBQ92765 325 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 HIST1H2BHQ93079 126 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 SGK494Q96LW2 274 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 HIST1H2BNQ99877 126 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms