RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZNF502Q8TBZ5 544 aa15.33■□□□□ 0.04
TNFRSF1A-201ENST00000162749 ANK3Q12955 4377 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-201ENST00000162749 CTSGP08311 255 aa15.32■□□□□ 0.04
TNFRSF1A-201ENST00000162749 PPIFP30405 207 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1A-201ENST00000162749 TXN2Q99757 166 aa15.32■□□□□ 0.04
TNFRSF1A-201ENST00000162749 TMEM167BQ9NRX6 74 aa15.32■□□□□ 0.04
TNFRSF1A-201ENST00000162749 HOXA3O43365 443 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-201ENST00000162749 GGCTO75223 188 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1A-201ENST00000162749 ZNF491Q8N8L2 437 aa15.32■□□□□ 0.04
TNFRSF1A-201ENST00000162749 FLNBO75369 2602 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1A-201ENST00000162749 A0A1W2PPQ1 181 aa15.31■□□□□ 0.04
TNFRSF1A-201ENST00000162749 CD99P14209 185 aa15.31■□□□□ 0.04
TNFRSF1A-201ENST00000162749 HIGD1AQ9Y241 93 aa15.31■□□□□ 0.04
TNFRSF1A-201ENST00000162749 IL4P05112 153 aa15.31■□□□□ 0.04
TNFRSF1A-201ENST00000162749 PYYP10082 97 aa15.31■□□□□ 0.04
TNFRSF1A-201ENST00000162749 ADMP35318 185 aa15.31■□□□□ 0.04
TNFRSF1A-201ENST00000162749 SRP14P37108 136 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1A-201ENST00000162749 OCC1Q8TAD7 63 aa15.31■□□□□ 0.04
TNFRSF1A-201ENST00000162749 C11orf52Q96A22 123 aa15.31■□□□□ 0.04
TNFRSF1A-201ENST00000162749 RNF125Q96EQ8 232 aa15.31■□□□□ 0.04
TNFRSF1A-201ENST00000162749 CCDC140Q96MF4 163 aa15.31■□□□□ 0.04
TNFRSF1A-201ENST00000162749 CHRDL1Q9BU40 450 aa15.31■□□□□ 0.04
TNFRSF1A-201ENST00000162749 MRPL27Q9P0M9 148 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1A-201ENST00000162749 UBE2L3P68036 154 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1A-201ENST00000162749 GPR183P32249 361 aa15.29■□□□□ 0.04
TNFRSF1A-201ENST00000162749 TMEM95Q3KNT9 176 aa15.29■□□□□ 0.04
TNFRSF1A-201ENST00000162749 HIST3H2BBQ8N257 126 aa15.29■□□□□ 0.04
TNFRSF1A-201ENST00000162749 TEX29Q8N6K0 151 aa15.29■□□□□ 0.04
TNFRSF1A-201ENST00000162749 ARL2-SNX15V9GYD0 113 aa15.29■□□□□ 0.04
TNFRSF1A-201ENST00000162749 PPP5D1E7EU14 171 aa15.29■□□□□ 0.04
TNFRSF1A-201ENST00000162749 CD5LO43866 347 aa15.29■□□□□ 0.04
TNFRSF1A-201ENST00000162749 FAM3BP58499 235 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-201ENST00000162749 LEMD1Q68G75 181 aa15.29■□□□□ 0.04
TNFRSF1A-201ENST00000162749 SFRP2Q96HF1 295 aa15.29■□□□□ 0.04
TNFRSF1A-201ENST00000162749 PAXXQ9BUH6 204 aa15.29■□□□□ 0.04
TNFRSF1A-201ENST00000162749 SLC25A39Q9BZJ4 359 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-201ENST00000162749 WI2-2373I1.2A0A1W2PRP0 233 aa15.28■□□□□ 0.04
TNFRSF1A-201ENST00000162749 FAM223BA6NKX1 122 aa15.28■□□□□ 0.04
TNFRSF1A-201ENST00000162749 TRGV3P03979 118 aa15.28■□□□□ 0.04
TNFRSF1A-201ENST00000162749 CLEC3BP05452 202 aa15.28■□□□□ 0.04
TNFRSF1A-201ENST00000162749 FAM223AQ8IWN6 122 aa15.28■□□□□ 0.04
TNFRSF1A-201ENST00000162749 GPR61Q9BZJ8 451 aa15.28■□□□□ 0.04
TNFRSF1A-201ENST00000162749 SCGB2A1O75556 95 aa15.28■□□□□ 0.04
TNFRSF1A-201ENST00000162749 BRI3O95415 125 aa15.28■□□□□ 0.04
TNFRSF1A-201ENST00000162749 FOSL1P15407 271 aa15.28■□□□□ 0.04
TNFRSF1A-201ENST00000162749 USF2Q15853 346 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-201ENST00000162749 EEF1AKMT3Q96AZ1 226 aa15.28■□□□□ 0.04
TNFRSF1A-201ENST00000162749 ZNF580Q9UK33 172 aa15.28■□□□□ 0.04
TNFRSF1A-201ENST00000162749 TRBV7-1A0A0A6YYK4 115 aa15.27■□□□□ 0.04
TNFRSF1A-201ENST00000162749 PPP1R2P9O14990 202 aa15.27■□□□□ 0.04
TNFRSF1A-201ENST00000162749 TYMSP04818 313 aa15.27■□□□□ 0.04
TNFRSF1A-201ENST00000162749 HNF1AP20823 631 aa15.27■□□□□ 0.04
TNFRSF1A-201ENST00000162749 CFHR3Q02985 330 aa15.27■□□□□ 0.04
TNFRSF1A-201ENST00000162749 PDZD11Q5EBL8 140 aa15.27■□□□□ 0.04
TNFRSF1A-201ENST00000162749 SIGLECL1Q8N7X8 197 aa15.27■□□□□ 0.04
TNFRSF1A-201ENST00000162749 STXBP6Q8NFX7 210 aa15.27■□□□□ 0.04
TNFRSF1A-201ENST00000162749 FXYD5Q96DB9 178 aa15.27■□□□□ 0.04
TNFRSF1A-201ENST00000162749 GAR1Q9NY12 217 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-201ENST00000162749 HIVEP2P31629 2446 aa15.27■□□□□ 0.03
TNFRSF1A-201ENST00000162749 H3BUA1 57 aa15.27■□□□□ 0.03
TNFRSF1A-201ENST00000162749 K7EN84 100 aa15.27■□□□□ 0.03
TNFRSF1A-201ENST00000162749 TPPP2P59282 170 aa15.27■□□□□ 0.03
TNFRSF1A-201ENST00000162749 ATP5G2Q06055 141 aa15.27■□□□□ 0.03
TNFRSF1A-201ENST00000162749 CLEC19AQ6UXS0 136 aa15.27■□□□□ 0.03
TNFRSF1A-201ENST00000162749 ZNF414Q96IQ9 312 aa15.27■□□□□ 0.03
TNFRSF1A-201ENST00000162749 IGLV1-40P01703 118 aa15.26■□□□□ 0.03
TNFRSF1A-201ENST00000162749 GP9P14770 177 aa15.26■□□□□ 0.03
TNFRSF1A-201ENST00000162749 TEX38Q6PEX7 206 aa15.26■□□□□ 0.03
TNFRSF1A-201ENST00000162749 KCNIP4Q6PIL6 250 aa15.26■□□□□ 0.03
TNFRSF1A-201ENST00000162749 GGTLC3B5MD39 225 aa15.25■□□□□ 0.03
TNFRSF1A-201ENST00000162749 IMMP2LQ96T52 175 aa15.25■□□□□ 0.03
TNFRSF1A-201ENST00000162749 KLK15Q9H2R5 256 aa15.25■□□□□ 0.03
TNFRSF1A-201ENST00000162749 IGHV3-35A0A0C4DH35 117 aa15.25■□□□□ 0.03
TNFRSF1A-201ENST00000162749 A0A1W2PRE2 83 aa15.25■□□□□ 0.03
TNFRSF1A-201ENST00000162749 SNRPCP09234 159 aaKnown RBP15.25■□□□□ 0.03
TNFRSF1A-201ENST00000162749 CRYBB3P26998 211 aa15.25■□□□□ 0.03
TNFRSF1A-201ENST00000162749 FOXL1Q12952 345 aa15.25■□□□□ 0.03
TNFRSF1A-201ENST00000162749 PYY3Q5JQD4 70 aa15.25■□□□□ 0.03
TNFRSF1A-201ENST00000162749 DUX5Q96PT3 197 aa15.25■□□□□ 0.03
TNFRSF1A-201ENST00000162749 SHANK2-AS3Q9BTD1 123 aa15.25■□□□□ 0.03
TNFRSF1A-201ENST00000162749 C9JCJ5 164 aa15.24■□□□□ 0.03
TNFRSF1A-201ENST00000162749 H3BRN7 92 aa15.24■□□□□ 0.03
TNFRSF1A-201ENST00000162749 ACTL10Q5JWF8 245 aa15.24■□□□□ 0.03
TNFRSF1A-201ENST00000162749 YAE1D1Q9NRH1 226 aa15.24■□□□□ 0.03
TNFRSF1A-201ENST00000162749 S100A2P29034 98 aa15.24■□□□□ 0.03
TNFRSF1A-201ENST00000162749 PF4V1P10720 104 aa15.23■□□□□ 0.03
TNFRSF1A-201ENST00000162749 ZNF329Q86UD4 541 aa15.23■□□□□ 0.03
TNFRSF1A-201ENST00000162749 OR10G8Q8NGN5 311 aa15.23■□□□□ 0.03
TNFRSF1A-201ENST00000162749 OR10D4PQ8NGN7 298 aa15.23■□□□□ 0.03
TNFRSF1A-201ENST00000162749 ATP6V0BQ99437 205 aa15.23■□□□□ 0.03
TNFRSF1A-201ENST00000162749 NPFFR1Q9GZQ6 430 aa15.23■□□□□ 0.03
TNFRSF1A-201ENST00000162749 LY96Q9Y6Y9 160 aa15.23■□□□□ 0.03
TNFRSF1A-201ENST00000162749 SETD2Q9BYW2 2564 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1A-201ENST00000162749 LCNL1Q6ZST4 164 aa15.23■□□□□ 0.03
TNFRSF1A-201ENST00000162749 PRSS22Q9GZN4 317 aa15.23■□□□□ 0.03
TNFRSF1A-201ENST00000162749 ZNF702PQ9H963 129 aa15.23■□□□□ 0.03
TNFRSF1A-201ENST00000162749 GNB4Q9HAV0 340 aa15.23■□□□□ 0.03
TNFRSF1A-201ENST00000162749 RPL15P61313 204 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-201ENST00000162749 SUMO1P63165 101 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-201ENST00000162749 USMG5Q96IX5 58 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms