RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W CRG1P38892 291 aaRIP-Chip data2.28□□□□□ -2.04not detected
CFT2YLR115W YJR142WP47173 342 aa2.28□□□□□ -2.04
CFT2YLR115W GPG1P53130 126 aa2.28□□□□□ -2.04
CFT2YLR115W UFO1Q04511 668 aa2.28□□□□□ -2.04
CFT2YLR115W THI73Q07904 523 aa2.28□□□□□ -2.04
CFT2YLR115W ERP4Q12450 207 aa2.28□□□□□ -2.04
CFT2YLR115W INH1P01097 85 aa2.27□□□□□ -2.05
CFT2YLR115W ADR1P07248 1323 aa2.27□□□□□ -2.05
CFT2YLR115W CDC26P14724 124 aa2.27□□□□□ -2.05
CFT2YLR115W YEF3P16521 1044 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W OPI1P21957 404 aa2.27□□□□□ -2.05
CFT2YLR115W SAT4P25333 603 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W SFP1P32432 683 aa2.27□□□□□ -2.05
CFT2YLR115W UGP1P32861 499 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W VPS24P36095 224 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W PXA1P41909 870 aa2.27□□□□□ -2.05
CFT2YLR115W YGL117WP53133 265 aa2.27□□□□□ -2.05
CFT2YLR115W MEH1Q02205 184 aa2.27□□□□□ -2.05
CFT2YLR115W MTQ2Q03920 221 aaPredicted RBP2.27□□□□□ -2.05
CFT2YLR115W ARG7Q04728 441 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-HO13535 1793 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-DR5P0C2I2 1755 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-DR6P0C2I3 1755 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-LR2P0C2I5 1755 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-LR3P0C2I6 1755 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W TY1B-PR1P0C2I9 1755 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W TY1B-PR2P0C2J0 1756 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-PR3P0C2J1 1755 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W TY2B-LR1P0C2J3 1770 aa2.27□□□□□ -2.05
CFT2YLR115W TY2B-FP0CX63 1770 aa2.27□□□□□ -2.05
CFT2YLR115W TY2B-GR2P0CX64 1770 aa2.27□□□□□ -2.05
CFT2YLR115W TY2B-CP25384 1770 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-JR1P47098 1755 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-ML2Q03434 1755 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W TY2B-DR2Q03494 1770 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-ER1Q03612 1755 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-DR1Q03855 1755 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-ML1Q04711 1755 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W TY2B-DR3Q07791 1770 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W TY2B-OR1Q12113 1770 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-GR2Q12269 1755 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-OLQ12273 1755 aa2.27□□□□□ -2.05
CFT2YLR115W TY1B-PLQ12414 1755 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W TY2B-DR1Q12472 1770 aa2.27□□□□□ -2.05
CFT2YLR115W TY2B-OR2Q12501 1770 aa2.27□□□□□ -2.05
CFT2YLR115W RPS17AP02407 136 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W RPS9BP05755 195 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W RPS21AP0C0V8 87 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W HOM2P13663 365 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W RPS17BP14127 136 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W PRP19P32523 503 aaKnown RBP2.27□□□□□ -2.05
CFT2YLR115W MTC7P32633 139 aa2.27□□□□□ -2.05
CFT2YLR115W YKR075CP36155 307 aa2.27□□□□□ -2.05
CFT2YLR115W FAT1P38225 669 aa2.27□□□□□ -2.05
CFT2YLR115W FTR1P40088 404 aa2.27□□□□□ -2.05
CFT2YLR115W NUP159P40477 1460 aa2.26□□□□□ -2.05
CFT2YLR115W GLN4P13188 809 aaKnown RBP2.26□□□□□ -2.05
CFT2YLR115W OAF3P36023 863 aa2.26□□□□□ -2.05
CFT2YLR115W TYS1P36421 394 aaKnown RBP2.26□□□□□ -2.05
CFT2YLR115W FUI1P38196 639 aa2.26□□□□□ -2.05
CFT2YLR115W PIP2P52960 996 aa2.26□□□□□ -2.05
CFT2YLR115W YNR029CP53729 429 aaKnown RBP2.26□□□□□ -2.05
CFT2YLR115W TIM50Q02776 476 aa2.26□□□□□ -2.05
CFT2YLR115W FDC1Q03034 503 aa2.26□□□□□ -2.05
CFT2YLR115W RIM13Q03792 727 aa2.26□□□□□ -2.05
CFT2YLR115W ULA1Q12059 462 aa2.26□□□□□ -2.05
CFT2YLR115W HFI1Q12060 488 aa2.26□□□□□ -2.05
CFT2YLR115W APM4Q99186 491 aa2.26□□□□□ -2.05
CFT2YLR115W TUP1P16649 713 aa2.26□□□□□ -2.05
CFT2YLR115W PRP22P24384 1145 aaKnown RBP2.26□□□□□ -2.05
CFT2YLR115W MRC1P25588 1096 aa2.26□□□□□ -2.05
CFT2YLR115W MF(ALPHA)2P32435 120 aa2.26□□□□□ -2.05
CFT2YLR115W ORC2P32833 620 aa2.26□□□□□ -2.05
CFT2YLR115W MRPL7P36519 292 aa2.26□□□□□ -2.05
CFT2YLR115W GZF3P42944 551 aaKnown RBP2.26□□□□□ -2.05
CFT2YLR115W YDL183CP48569 320 aa2.26□□□□□ -2.05
CFT2YLR115W ATG16Q03818 150 aa2.26□□□□□ -2.05
CFT2YLR115W MDM20Q12387 796 aaKnown RBP2.26□□□□□ -2.05
CFT2YLR115W SKI3P17883 1432 aaKnown RBP2.26□□□□□ -2.05
CFT2YLR115W TPK2P06245 380 aa2.25□□□□□ -2.05
CFT2YLR115W ADE5,7P07244 802 aaKnown RBP2.25□□□□□ -2.05
CFT2YLR115W SEC15P22224 910 aa2.25□□□□□ -2.05
CFT2YLR115W MBR1P23493 339 aa2.25□□□□□ -2.05
CFT2YLR115W SEC65P29478 273 aa2.25□□□□□ -2.05
CFT2YLR115W SWI3P32591 825 aa2.25□□□□□ -2.05
CFT2YLR115W TMN3P40071 706 aa2.25□□□□□ -2.05
CFT2YLR115W BNA3P47039 444 aaKnown RBP2.25□□□□□ -2.05
CFT2YLR115W YGR153WP48238 217 aa2.25□□□□□ -2.05
CFT2YLR115W TAF4P50105 388 aa2.25□□□□□ -2.05
CFT2YLR115W RPS15Q01855 142 aaKnown RBP2.25□□□□□ -2.05
CFT2YLR115W FMP30Q02883 468 aa2.25□□□□□ -2.05
CFT2YLR115W NGL2Q03264 515 aaKnown RBP2.25□□□□□ -2.05
CFT2YLR115W SEG1Q04279 960 aa2.25□□□□□ -2.05
CFT2YLR115W AFT2Q08957 416 aa2.25□□□□□ -2.05
CFT2YLR115W TMA7Q3E764 64 aaKnown RBP2.25□□□□□ -2.05
CFT2YLR115W ERG11P10614 530 aa2.25□□□□□ -2.05
CFT2YLR115W UBP12P39538 1254 aa2.25□□□□□ -2.05
CFT2YLR115W OAF1P39720 1047 aaPredicted RBP2.25□□□□□ -2.05
CFT2YLR115W GPP1P41277 250 aaKnown RBP2.25□□□□□ -2.05
CFT2YLR115W TAX4P47030 604 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms