RNA–Protein interactions for RNA: ENST00000641480.1

CASC19-232, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,244 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-232ENST00000641480 UPF3BQ9BZI7 483 aaKnown RBP8.57□□□□□ -1.04
CASC19-232ENST00000641480 MROH5Q6ZUA9 1318 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 SCN7AQ01118 1682 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 RIC1Q4ADV7 1423 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 A0A0D9SFI3 127 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 A0A1B0GUL7 405 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 IFIT1P09914 478 aaKnown RBP8.56□□□□□ -1.04
CASC19-232ENST00000641480 UQCRFS1P1P0C7P4 283 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 RPS6KB1P23443 525 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 ZNF445P59923 1031 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 PTH1RQ03431 593 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 ZMYM1Q5SVZ6 1142 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 ZNF34Q8IZ26 560 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 SYNE4Q8N205 404 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 FBXL16Q8N461 479 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 ZGPATQ8N5A5 531 aaKnown RBP8.56□□□□□ -1.04
CASC19-232ENST00000641480 KLHDC4Q8TBB5 520 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 FAM227BQ96M60 508 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 TMEM106CQ9BVX2 250 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.56□□□□□ -1.04
CASC19-232ENST00000641480 NYXQ9GZU5 481 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 VPS33BQ9H267 617 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 CTNNA3Q9UI47 895 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 SMC3Q9UQE7 1217 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 KIF3AQ9Y496 699 aa8.56□□□□□ -1.04
CASC19-232ENST00000641480 DDX49Q9Y6V7 483 aaKnown RBP8.56□□□□□ -1.04
CASC19-232ENST00000641480 ZNF541Q9H0D2 1346 aa8.55□□□□□ -1.04
CASC19-232ENST00000641480 IRS4O14654 1257 aaPredicted RBP8.55□□□□□ -1.04
CASC19-232ENST00000641480 RNF113AO15541 343 aaKnown RBP8.55□□□□□ -1.04
CASC19-232ENST00000641480 IGSF3O75054 1194 aa8.55□□□□□ -1.04
CASC19-232ENST00000641480 NCLP19338 710 aaKnown RBP8.55□□□□□ -1.04
CASC19-232ENST00000641480 TTC39AQ5SRH9 613 aa8.55□□□□□ -1.04
CASC19-232ENST00000641480 TMED8Q6PL24 325 aaPredicted RBP8.55□□□□□ -1.04
CASC19-232ENST00000641480 MS4A3Q96HJ5 214 aa8.55□□□□□ -1.04
CASC19-232ENST00000641480 NIP7Q9Y221 180 aaKnown RBP eCLIP8.55□□□□□ -1.04
CASC19-232ENST00000641480 TLL2Q9Y6L7 1015 aa8.55□□□□□ -1.04
CASC19-232ENST00000641480 WDR19Q8NEZ3 1342 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 COL11A2P13942 1736 aaPredicted RBP8.54□□□□□ -1.04
CASC19-232ENST00000641480 AKAP11Q9UKA4 1901 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 PDE4DIPQ5VU43 2346 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 ADAMTSL1Q8N6G6 1762 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 ZSCAN22P10073 491 aaPredicted RBP8.54□□□□□ -1.04
CASC19-232ENST00000641480 ATP2B3Q16720 1220 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 GORABQ5T7V8 394 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 MCTP1Q6DN14 999 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 TTLL11Q8NHH1 800 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 ZC3H15Q8WU90 426 aaKnown RBP8.54□□□□□ -1.04
CASC19-232ENST00000641480 NEUROD6Q96NK8 337 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 DNAJC2Q99543 621 aaKnown RBP8.54□□□□□ -1.04
CASC19-232ENST00000641480 LLPHQ9BRT6 129 aaKnown RBP8.54□□□□□ -1.04
CASC19-232ENST00000641480 LMBRD1Q9NUN5 540 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 TRMT112Q9UI30 125 aaKnown RBP8.54□□□□□ -1.04
CASC19-232ENST00000641480 ZDHHC9Q9Y397 364 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 RIPOR2Q9Y4F9 1068 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 GJA3Q9Y6H8 435 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 LAMA4Q16363 1823 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 DOCK2Q92608 1830 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 DDX60Q8IY21 1712 aaKnown RBP8.54□□□□□ -1.04
CASC19-232ENST00000641480 ZMYM6O95789 1325 aa8.54□□□□□ -1.04
CASC19-232ENST00000641480 STX6O43752 255 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 ITGA6P23229 1130 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 ARID4AP29374 1257 aaPredicted RBP8.53□□□□□ -1.04
CASC19-232ENST00000641480 NOGQ13253 232 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 GRM1Q13255 1194 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 PUM3Q15397 648 aaKnown RBP8.53□□□□□ -1.04
CASC19-232ENST00000641480 CRY2Q49AN0 593 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 CCDC152Q4G0S7 254 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 LRRC24Q50LG9 513 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 METTL24Q5JXM2 366 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 CST9Q5W186 159 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 CYP4F22Q6NT55 531 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 LDHAL6AQ6ZMR3 332 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 SAPCD2Q86UD0 394 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 ZNF589Q86UQ0 364 aaPredicted RBP8.53□□□□□ -1.04
CASC19-232ENST00000641480 LARGE2Q8N3Y3 721 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 LPIN2Q92539 896 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 APPBP2Q92624 585 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 ANP32BQ92688 251 aaKnown RBP8.53□□□□□ -1.04
CASC19-232ENST00000641480 RPGRQ92834 1020 aaKnown RBP8.53□□□□□ -1.04
CASC19-232ENST00000641480 DDX27Q96GQ7 796 aaKnown RBP8.53□□□□□ -1.04
CASC19-232ENST00000641480 XAGE2Q96GT9 111 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 NEK1Q96PY6 1258 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 CDC5LQ99459 802 aaKnown RBP8.53□□□□□ -1.04
CASC19-232ENST00000641480 UTP14AQ9BVJ6 771 aaKnown RBP8.53□□□□□ -1.04
CASC19-232ENST00000641480 AGXT2Q9BYV1 514 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 ADARB2Q9NS39 739 aaKnown RBP8.53□□□□□ -1.04
CASC19-232ENST00000641480 TRPC6Q9Y210 931 aa8.53□□□□□ -1.04
CASC19-232ENST00000641480 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.53□□□□□ -1.04
CASC19-232ENST00000641480 THSD7BQ9C0I4 1608 aa8.52□□□□□ -1.05
CASC19-232ENST00000641480 GOLIM4O00461 696 aa8.52□□□□□ -1.05
CASC19-232ENST00000641480 LETM1O95202 739 aaPredicted RBP8.52□□□□□ -1.05
CASC19-232ENST00000641480 PDE8BO95263 885 aa8.52□□□□□ -1.05
CASC19-232ENST00000641480 F13A1P00488 732 aa8.52□□□□□ -1.05
CASC19-232ENST00000641480 SLC5A1P13866 664 aa8.52□□□□□ -1.05
CASC19-232ENST00000641480 HOXA10P31260 410 aaPredicted RBP8.52□□□□□ -1.05
CASC19-232ENST00000641480 SCNN1DP51172 638 aa8.52□□□□□ -1.05
CASC19-232ENST00000641480 HMGN5P82970 282 aaKnown RBP8.52□□□□□ -1.05
CASC19-232ENST00000641480 UBE3CQ15386 1083 aa8.52□□□□□ -1.05
CASC19-232ENST00000641480 LCE2DQ5TA82 110 aaPredicted RBP8.52□□□□□ -1.05
CASC19-232ENST00000641480 DDX46Q7L014 1031 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms