RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 SMIM5Q71RC9 77 aa9.17□□□□□ -0.94
RTTN-223ENST00000640931 GTF3C6Q969F1 213 aa9.17□□□□□ -0.94
RTTN-223ENST00000640931 ZNF594Q96JF6 807 aaPredicted RBP9.17□□□□□ -0.94
RTTN-223ENST00000640931 BAG1Q99933 345 aaPredicted RBP9.17□□□□□ -0.94
RTTN-223ENST00000640931 BLOC1S6Q9UL45 172 aa9.17□□□□□ -0.94
RTTN-223ENST00000640931 CHMP3Q9Y3E7 222 aa9.17□□□□□ -0.94
RTTN-223ENST00000640931 SYCE3A1L190 88 aa9.17□□□□□ -0.94
RTTN-223ENST00000640931 RAB11FIP3O75154 756 aa9.17□□□□□ -0.94
RTTN-223ENST00000640931 CD44P16070 742 aaKnown RBP9.17□□□□□ -0.94
RTTN-223ENST00000640931 RFX5P48382 616 aaPredicted RBP9.17□□□□□ -0.94
RTTN-223ENST00000640931 NEXNQ0ZGT2 675 aa9.17□□□□□ -0.94
RTTN-223ENST00000640931 MTX1Q13505 466 aa9.17□□□□□ -0.94
RTTN-223ENST00000640931 HSP90B2PQ58FF3 399 aa9.17□□□□□ -0.94
RTTN-223ENST00000640931 MCTP1Q6DN14 999 aa9.17□□□□□ -0.94
RTTN-223ENST00000640931 ZNF280DQ6N043 979 aa9.17□□□□□ -0.94
RTTN-223ENST00000640931 SYAP1Q96A49 352 aaPredicted RBP9.17□□□□□ -0.94
RTTN-223ENST00000640931 PES1O00541 588 aaKnown RBP9.16□□□□□ -0.94
RTTN-223ENST00000640931 ERC2O15083 957 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 KCNQ4P56696 695 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 ST5P78524 1137 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 COL9A3Q14050 684 aaPredicted RBP9.16□□□□□ -0.94
RTTN-223ENST00000640931 HLFQ16534 295 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 LMBR1LQ6UX01 489 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 PLBD2Q8NHP8 589 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 KCNB2Q92953 911 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 IQCGQ9H095 443 aaKnown RBP9.16□□□□□ -0.94
RTTN-223ENST00000640931 MCM8Q9UJA3 840 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.16□□□□□ -0.94
RTTN-223ENST00000640931 TUBGCP6Q96RT7 1819 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 KAT6BQ8WYB5 2073 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 DISP2A7MBM2 1401 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 ADCY5O95622 1261 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 PECAM1P16284 738 aaPredicted RBP9.16□□□□□ -0.94
RTTN-223ENST00000640931 EIF5P55010 431 aaKnown RBP9.16□□□□□ -0.94
RTTN-223ENST00000640931 FOXO4P98177 505 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 TFCP2Q12800 502 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 NAA30Q147X3 362 aaPredicted RBP9.16□□□□□ -0.94
RTTN-223ENST00000640931 PTF1AQ7RTS3 328 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 ANKRD18AQ8IVF6 992 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 NME8Q8N427 588 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 CHAMP1Q96JM3 812 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 ARPC5LQ9BPX5 153 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 BOLA2Q9H3K6 86 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 ANO2Q9NQ90 1003 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 USP25Q9UHP3 1055 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 PYCARDQ9ULZ3 195 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 SYNPO2Q9UMS6 1093 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 FARP1Q9Y4F1 1045 aaPredicted RBP9.16□□□□□ -0.94
RTTN-223ENST00000640931 RIPOR2Q9Y4F9 1068 aa9.16□□□□□ -0.94
RTTN-223ENST00000640931 AK9Q5TCS8 1911 aa9.15□□□□□ -0.94
RTTN-223ENST00000640931 ARFGEF2Q9Y6D5 1785 aa9.15□□□□□ -0.94
RTTN-223ENST00000640931 OATP04181 439 aa9.15□□□□□ -0.94
RTTN-223ENST00000640931 GPTP24298 496 aa9.15□□□□□ -0.94
RTTN-223ENST00000640931 MRPL12P52815 198 aaKnown RBP9.15□□□□□ -0.94
RTTN-223ENST00000640931 PTPN12Q05209 780 aaKnown RBP9.15□□□□□ -0.94
RTTN-223ENST00000640931 G3BP1Q13283 466 aaKnown RBP eCLIP9.15□□□□□ -0.94
RTTN-223ENST00000640931 CWC27Q6UX04 472 aaKnown RBP9.15□□□□□ -0.94
RTTN-223ENST00000640931 MICAL1Q8TDZ2 1067 aa9.15□□□□□ -0.94
RTTN-223ENST00000640931 PUS3Q9BZE2 481 aaKnown RBP9.15□□□□□ -0.94
RTTN-223ENST00000640931 TMEM63CQ9P1W3 806 aa9.15□□□□□ -0.94
RTTN-223ENST00000640931 TNS2Q63HR2 1409 aa9.15□□□□□ -0.94
RTTN-223ENST00000640931 EXOC5O00471 708 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 IFIT2P09913 472 aaKnown RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 CPA1P15085 419 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 NF2P35240 595 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 FAM182BQ5T319 152 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 REXO1L1PQ8IX06 675 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 CTCFLQ8NI51 663 aaPredicted RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 SNRNP27Q8WVK2 155 aaKnown RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 AGAP3Q96P47 875 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 MTA3Q9BTC8 594 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 ARGLU1Q9NWB6 273 aaPredicted RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 CLIP2Q9UDT6 1046 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 AFDNP55196 1824 aaKnown RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 K7ELQ4 463 aaPredicted RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 POLR3GO15318 223 aaPredicted RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 KCNQ2O43526 872 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 RTN2O75298 545 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 ZRANB2O95218 330 aaKnown RBP eCLIP9.14□□□□□ -0.95
RTTN-223ENST00000640931 NAT1P18440 290 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 ALDH1B1P30837 517 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 HNRNPH1P31943 449 aaKnown RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 CCNHP51946 323 aaPredicted RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 DDR1Q08345 913 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 PKP1Q13835 747 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 LRRC24Q50LG9 513 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 MFSD4BQ5TF39 518 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 HHATQ5VTY9 493 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 CLASRPQ8N2M8 674 aaKnown RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 ZGPATQ8N5A5 531 aaKnown RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 MARCH10Q8NA82 808 aaPredicted RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 HELBQ8NG08 1087 aaPredicted RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 FAM89AQ96GI7 184 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 FAM227BQ96M60 508 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 PLEKHG4BQ96PX9 1271 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 SRRTQ9BXP5 876 aaKnown RBP9.14□□□□□ -0.95
RTTN-223ENST00000640931 ZBTB1Q9Y2K1 713 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 UBR2Q8IWV8 1755 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 PAPPAQ13219 1627 aa9.14□□□□□ -0.95
RTTN-223ENST00000640931 SYNRGQ9UMZ2 1314 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms