RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 SSH3Q8TE77 659 aa14.56□□□□□ -0.08
ERGIC3-220ENST00000640748 OPTNQ96CV9 577 aa14.56□□□□□ -0.08
ERGIC3-220ENST00000640748 TMEM39BQ9GZU3 492 aa14.56□□□□□ -0.08
ERGIC3-220ENST00000640748 BICC1Q9H694 974 aaKnown RBP14.56□□□□□ -0.08
ERGIC3-220ENST00000640748 ELP3Q9H9T3 547 aa14.56□□□□□ -0.08
ERGIC3-220ENST00000640748 BRCA2P51587 3418 aa14.56□□□□□ -0.08
ERGIC3-220ENST00000640748 ARAP2Q8WZ64 1704 aa14.55□□□□□ -0.08
ERGIC3-220ENST00000640748 PNMA6EA0A0J9YXQ4 647 aa14.55□□□□□ -0.08
ERGIC3-220ENST00000640748 POTEFA5A3E0 1075 aa14.55□□□□□ -0.08
ERGIC3-220ENST00000640748 CRKP46108 304 aa14.55□□□□□ -0.08
ERGIC3-220ENST00000640748 TNFAIP1Q13829 316 aa14.55□□□□□ -0.08
ERGIC3-220ENST00000640748 POLA2Q14181 598 aa14.55□□□□□ -0.08
ERGIC3-220ENST00000640748 LRRC24Q50LG9 513 aa14.55□□□□□ -0.08
ERGIC3-220ENST00000640748 CD99L2Q8TCZ2 262 aa14.55□□□□□ -0.08
ERGIC3-220ENST00000640748 IQSEC3Q9UPP2 1182 aaPredicted RBP14.55□□□□□ -0.08
ERGIC3-220ENST00000640748 PTPN22Q9Y2R2 807 aa14.55□□□□□ -0.08
ERGIC3-220ENST00000640748 MROH5Q6ZUA9 1318 aa14.55□□□□□ -0.08
ERGIC3-220ENST00000640748 TCP10L2B9ZVM9 353 aa14.54□□□□□ -0.08
ERGIC3-220ENST00000640748 VGLL4Q14135 290 aa14.54□□□□□ -0.08
ERGIC3-220ENST00000640748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.54□□□□□ -0.082e-11■□□□□ 9.4
ERGIC3-220ENST00000640748 BRI3BPQ8WY22 251 aa14.54□□□□□ -0.08
ERGIC3-220ENST00000640748 PCDH10Q9P2E7 1040 aa14.54□□□□□ -0.08
ERGIC3-220ENST00000640748 ANP32AP39687 249 aaKnown RBP14.53□□□□□ -0.08
ERGIC3-220ENST00000640748 MTX1Q13505 466 aa14.53□□□□□ -0.08
ERGIC3-220ENST00000640748 ARMC5Q96C12 935 aa14.53□□□□□ -0.08
ERGIC3-220ENST00000640748 ERO1AQ96HE7 468 aa14.53□□□□□ -0.08
ERGIC3-220ENST00000640748 APBB1O00213 710 aa14.52□□□□□ -0.09
ERGIC3-220ENST00000640748 SRGAP3O43295 1099 aa14.52□□□□□ -0.09
ERGIC3-220ENST00000640748 RAB11FIP3O75154 756 aa14.52□□□□□ -0.09
ERGIC3-220ENST00000640748 PDE8BO95263 885 aa14.52□□□□□ -0.09
ERGIC3-220ENST00000640748 CACNB3P54284 484 aa14.52□□□□□ -0.09
ERGIC3-220ENST00000640748 HDLBPQ00341 1268 aaKnown RBP14.52□□□□□ -0.09
ERGIC3-220ENST00000640748 SP3Q02447 781 aa14.52□□□□□ -0.09
ERGIC3-220ENST00000640748 CHAF1AQ13111 956 aaPredicted RBP14.52□□□□□ -0.09
ERGIC3-220ENST00000640748 HSP90AB4PQ58FF6 505 aa14.52□□□□□ -0.09
ERGIC3-220ENST00000640748 OTUD7BQ6GQQ9 843 aa14.52□□□□□ -0.09
ERGIC3-220ENST00000640748 KLHDC4Q8TBB5 520 aa14.52□□□□□ -0.09
ERGIC3-220ENST00000640748 LRRCC1Q9C099 1032 aa14.52□□□□□ -0.09
ERGIC3-220ENST00000640748 EXOC6BQ9Y2D4 811 aa14.52□□□□□ -0.09
ERGIC3-220ENST00000640748 SMARCA5O60264 1052 aaPredicted RBP14.51□□□□□ -0.09
ERGIC3-220ENST00000640748 BCAMP50895 628 aa14.51□□□□□ -0.09
ERGIC3-220ENST00000640748 MAP3K9P80192 1104 aa14.51□□□□□ -0.09
ERGIC3-220ENST00000640748 METTL24Q5JXM2 366 aa14.51□□□□□ -0.09
ERGIC3-220ENST00000640748 APOBEC3HQ6NTF7 200 aaKnown RBP14.51□□□□□ -0.09
ERGIC3-220ENST00000640748 PLEKHM2Q8IWE5 1019 aa14.51□□□□□ -0.09
ERGIC3-220ENST00000640748 FAM43AQ8N2R8 423 aa14.51□□□□□ -0.09
ERGIC3-220ENST00000640748 EFCC1Q9HA90 598 aa14.51□□□□□ -0.09
ERGIC3-220ENST00000640748 SNCAIPQ9Y6H5 919 aa14.51□□□□□ -0.09
ERGIC3-220ENST00000640748 KIAA0100Q14667 2235 aaKnown RBP14.51□□□□□ -0.09
ERGIC3-220ENST00000640748 CCL15-CCL14A0A0B4J2E2 113 aa14.5□□□□□ -0.09
ERGIC3-220ENST00000640748 SURF6O75683 361 aaKnown RBP14.5□□□□□ -0.09
ERGIC3-220ENST00000640748 FGFR2P21802 821 aa14.5□□□□□ -0.09
ERGIC3-220ENST00000640748 CCL15Q16663 113 aa14.5□□□□□ -0.09
ERGIC3-220ENST00000640748 BMP2KLQ5H9B9 411 aa14.5□□□□□ -0.09
ERGIC3-220ENST00000640748 TBC1D22AQ8WUA7 517 aa14.5□□□□□ -0.09
ERGIC3-220ENST00000640748 ZDHHC15Q96MV8 337 aa14.5□□□□□ -0.09
ERGIC3-220ENST00000640748 MRIQ9BWK5 157 aa14.5□□□□□ -0.09
ERGIC3-220ENST00000640748 SPDYE5A6NIY4 337 aa14.49□□□□□ -0.09
ERGIC3-220ENST00000640748 TNNI2P48788 182 aa14.49□□□□□ -0.09
ERGIC3-220ENST00000640748 GTF2A2P52657 109 aa14.49□□□□□ -0.09
ERGIC3-220ENST00000640748 CAVIN4Q5BKX8 364 aa14.49□□□□□ -0.09
ERGIC3-220ENST00000640748 VPS37DQ86XT2 251 aa14.49□□□□□ -0.09
ERGIC3-220ENST00000640748 TEKT1Q969V4 418 aa14.49□□□□□ -0.09
ERGIC3-220ENST00000640748 OTUD5Q96G74 571 aa14.49□□□□□ -0.09
ERGIC3-220ENST00000640748 RBBP6Q7Z6E9 1792 aaKnown RBP14.49□□□□□ -0.09
ERGIC3-220ENST00000640748 EN2P19622 333 aaPredicted RBP14.48□□□□□ -0.09
ERGIC3-220ENST00000640748 RFX5P48382 616 aaPredicted RBP14.48□□□□□ -0.09
ERGIC3-220ENST00000640748 TAF1CQ15572 869 aaPredicted RBP14.48□□□□□ -0.09
ERGIC3-220ENST00000640748 ZNF333Q96JL9 665 aa14.48□□□□□ -0.09
ERGIC3-220ENST00000640748 NOP58Q9Y2X3 529 aaKnown RBP14.48□□□□□ -0.09
ERGIC3-220ENST00000640748 CSADQ9Y600 493 aa14.48□□□□□ -0.09
ERGIC3-220ENST00000640748 PUM3Q15397 648 aaKnown RBP14.47□□□□□ -0.09
ERGIC3-220ENST00000640748 TTC22Q5TAA0 569 aa14.47□□□□□ -0.09
ERGIC3-220ENST00000640748 FKBP1CQ5VVH2 108 aa14.47□□□□□ -0.09
ERGIC3-220ENST00000640748 FAM83AQ86UY5 434 aa14.47□□□□□ -0.09
ERGIC3-220ENST00000640748 ERC1Q8IUD2 1116 aa14.47□□□□□ -0.09
ERGIC3-220ENST00000640748 ZKSCAN4Q969J2 545 aaPredicted RBP14.47□□□□□ -0.09
ERGIC3-220ENST00000640748 KIF1BPQ96EK5 621 aa14.47□□□□□ -0.09
ERGIC3-220ENST00000640748 BCL11AQ9H165 835 aa14.47□□□□□ -0.09
ERGIC3-220ENST00000640748 UPF2Q9HAU5 1272 aaKnown RBP14.47□□□□□ -0.09
ERGIC3-220ENST00000640748 SUGT1Q9Y2Z0 365 aa14.47□□□□□ -0.09
ERGIC3-220ENST00000640748 PTCH2Q9Y6C5 1203 aa14.47□□□□□ -0.09
ERGIC3-220ENST00000640748 BTBD19C9JJ37 291 aa14.46□□□□□ -0.09
ERGIC3-220ENST00000640748 IRF6O14896 467 aa14.46□□□□□ -0.09
ERGIC3-220ENST00000640748 FRAT2O75474 233 aaPredicted RBP14.46□□□□□ -0.09
ERGIC3-220ENST00000640748 OS9Q13438 667 aaPredicted RBP14.46□□□□□ -0.09
ERGIC3-220ENST00000640748 HHIPL2Q6UWX4 724 aa14.46□□□□□ -0.09
ERGIC3-220ENST00000640748 ATG9AQ7Z3C6 839 aa14.46□□□□□ -0.09
ERGIC3-220ENST00000640748 ERO1BQ86YB8 467 aa14.46□□□□□ -0.09
ERGIC3-220ENST00000640748 RHPN1Q8TCX5 695 aa14.46□□□□□ -0.09
ERGIC3-220ENST00000640748 WRNIP1Q96S55 665 aa14.46□□□□□ -0.09
ERGIC3-220ENST00000640748 ARHGAP39Q9C0H5 1083 aa14.46□□□□□ -0.09
ERGIC3-220ENST00000640748 OSBPL3Q9H4L5 887 aa14.46□□□□□ -0.09
ERGIC3-220ENST00000640748 ZFYVE28Q9HCC9 887 aa14.46□□□□□ -0.09
ERGIC3-220ENST00000640748 RPAP1Q9BWH6 1393 aaPredicted RBP14.46□□□□□ -0.1
ERGIC3-220ENST00000640748 EYA2O00167 538 aa14.45□□□□□ -0.1
ERGIC3-220ENST00000640748 IFIT1P09914 478 aaKnown RBP14.45□□□□□ -0.1
ERGIC3-220ENST00000640748 CETPP11597 493 aa14.45□□□□□ -0.1
ERGIC3-220ENST00000640748 OTUD7AQ8TE49 926 aaPredicted RBP14.45□□□□□ -0.1
ERGIC3-220ENST00000640748 ZSWIM8A7E2V4 1837 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms