RNA–Protein interactions for RNA: ENST00000639824.1

HNRNPU-221, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-221ENST00000639824 TNMDQ9H2S6 317 aa13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 RCOR1Q9UKL0 485 aa13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 ANGEL1Q9UNK9 670 aaKnown RBP13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 TIAM2Q8IVF5 1701 aa13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 GOLGA8BA8MQT2 603 aa13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 HAND2P61296 217 aa13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 SF3B3Q15393 1217 aaKnown RBP13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 TMED8Q6PL24 325 aaPredicted RBP13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 PNPLA7Q6ZV29 1317 aa13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 BRAPQ7Z569 592 aa13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 BICD2Q8TD16 824 aa13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 STRBPQ96SI9 672 aaKnown RBP13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 NYXQ9GZU5 481 aa13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 CLSTN2Q9H4D0 955 aa13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 MYO5AQ9Y4I1 1855 aaKnown RBP13.23□□□□□ -0.29
HNRNPU-221ENST00000639824 UBE4AQ14139 1066 aa13.22□□□□□ -0.29
HNRNPU-221ENST00000639824 RBM43Q6ZSC3 357 aaKnown RBP13.22□□□□□ -0.29
HNRNPU-221ENST00000639824 ANKRD18AQ8IVF6 992 aa13.22□□□□□ -0.29
HNRNPU-221ENST00000639824 KRT23Q9C075 422 aa13.22□□□□□ -0.29
HNRNPU-221ENST00000639824 NAPBQ9H115 298 aa13.22□□□□□ -0.29
HNRNPU-221ENST00000639824 TFIP11Q9UBB9 837 aaKnown RBP13.22□□□□□ -0.29
HNRNPU-221ENST00000639824 A0A1B0GUL6 1792 aa13.21□□□□□ -0.29
HNRNPU-221ENST00000639824 C4AP0C0L4 1744 aa13.21□□□□□ -0.29
HNRNPU-221ENST00000639824 C4BP0C0L5 1744 aa13.21□□□□□ -0.29
HNRNPU-221ENST00000639824 IGSF3O75054 1194 aa13.21□□□□□ -0.3
HNRNPU-221ENST00000639824 PTMAP06454 111 aaKnown RBP13.21□□□□□ -0.3
HNRNPU-221ENST00000639824 TPM3P06753 285 aa13.21□□□□□ -0.3
HNRNPU-221ENST00000639824 RASGRF1Q13972 1273 aa13.21□□□□□ -0.3
HNRNPU-221ENST00000639824 FAM173BQ6P4H8 233 aa13.21□□□□□ -0.3
HNRNPU-221ENST00000639824 GIMAP6Q6P9H5 292 aa13.21□□□□□ -0.3
HNRNPU-221ENST00000639824 FAM200AQ8TCP9 573 aa13.21□□□□□ -0.3
HNRNPU-221ENST00000639824 C8orf76Q96K31 380 aa13.21□□□□□ -0.3
HNRNPU-221ENST00000639824 WWC3Q9ULE0 1092 aa13.21□□□□□ -0.3
HNRNPU-221ENST00000639824 ZKSCAN5Q9Y2L8 839 aa13.21□□□□□ -0.3
HNRNPU-221ENST00000639824 NHSQ6T4R5 1651 aa13.21□□□□□ -0.3
HNRNPU-221ENST00000639824 A0A0G2JLW4 131 aa13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 ZNF500O60304 480 aaPredicted RBP13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 KDM4AO75164 1064 aa13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 LIFRP42702 1097 aa13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 ANTXR2P58335 489 aa13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 CHRNDQ07001 517 aa13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 SART3Q15020 963 aaKnown RBP13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 SLC10A5Q5PT55 438 aa13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 SASS6Q6UVJ0 657 aa13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 CCDC73Q6ZRK6 1079 aa13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 CHST3Q7LGC8 479 aa13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 MAGEB6Q8N7X4 407 aa13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 HELBQ8NG08 1087 aaPredicted RBP13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 RNF41Q9H4P4 317 aaPredicted RBP13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 NCOA5Q9HCD5 579 aaKnown RBP13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 SEC31BQ9NQW1 1179 aa13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 BSDC1Q9NW68 430 aaPredicted RBP13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 DACT1Q9NYF0 836 aa13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 ORC3Q9UBD5 711 aaPredicted RBP13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 BOLA1Q9Y3E2 137 aa13.2□□□□□ -0.3
HNRNPU-221ENST00000639824 CASZ1Q86V15 1759 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 FAM177BA6PVY3 158 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 SH2B2O14492 632 aaPredicted RBP13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 SEMA3EO15041 775 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 LIG1P18858 919 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 METAP2P50579 478 aaKnown RBP eCLIP13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 RCAN1P53805 252 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 CAVIN4Q5BKX8 364 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 SYNE3Q6ZMZ3 975 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 SGMS1Q86VZ5 419 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 IFNL3Q8IZI9 196 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 TMTC2Q8N394 836 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 FBXO18Q8NFZ0 1043 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 KCNG4Q8TDN1 519 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 RTEL1Q9NZ71 1219 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 BCL9LQ86UU0 1499 aa13.19□□□□□ -0.3
HNRNPU-221ENST00000639824 ZNF804BA4D1E1 1349 aa13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 PDS5AQ29RF7 1337 aaKnown RBP13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 GOLGA6L6A8MZA4 724 aa13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 MBD4O95243 580 aa13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 YEATS4O95619 227 aa13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 GTF2E1P29083 439 aaPredicted RBP13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 ADD1P35611 737 aaKnown RBP13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 TYRO3Q06418 890 aa13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 FAM98CQ17RN3 349 aaKnown RBP13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 WASF1Q92558 559 aa13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 NGLY1Q96IV0 654 aa13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 PGBD1Q96JS3 809 aa13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 LRP2BPQ9P2M1 347 aa13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 HPS5Q9UPZ3 1129 aa13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 NID2Q14112 1375 aa13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 STK36Q9NRP7 1315 aa13.18□□□□□ -0.3
HNRNPU-221ENST00000639824 A0A1W2PQ27 194 aa13.17□□□□□ -0.3
HNRNPU-221ENST00000639824 A0A1W2PQ64 194 aa13.17□□□□□ -0.3
HNRNPU-221ENST00000639824 A0A1W2PQD8 194 aa13.17□□□□□ -0.3
HNRNPU-221ENST00000639824 ZBTB43O43298 467 aa13.17□□□□□ -0.3
HNRNPU-221ENST00000639824 DTNBO60941 627 aa13.17□□□□□ -0.3
HNRNPU-221ENST00000639824 RPS6KA4O75676 772 aa13.17□□□□□ -0.3
HNRNPU-221ENST00000639824 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
HNRNPU-221ENST00000639824 PIP4K2BP78356 416 aa13.17□□□□□ -0.3
HNRNPU-221ENST00000639824 TPRNQ4KMQ1 711 aa13.17□□□□□ -0.3
HNRNPU-221ENST00000639824 AKNAD1Q5T1N1 836 aa13.17□□□□□ -0.3
HNRNPU-221ENST00000639824 MFSD6Q6ZSS7 791 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms