RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 NBPF12Q5TAG4 269 aaPredicted RBP6.95□□□□□ -1.3
PDE4D-229ENST00000638939 OTUD7BQ6GQQ9 843 aa6.95□□□□□ -1.3
PDE4D-229ENST00000638939 LMBR1LQ6UX01 489 aa6.95□□□□□ -1.3
PDE4D-229ENST00000638939 LDHAL6AQ6ZMR3 332 aa6.95□□□□□ -1.3
PDE4D-229ENST00000638939 HELBQ8NG08 1087 aaPredicted RBP6.95□□□□□ -1.3
PDE4D-229ENST00000638939 TDRD7Q8NHU6 1098 aaKnown RBP6.95□□□□□ -1.3
PDE4D-229ENST00000638939 ARMC5Q96C12 935 aa6.95□□□□□ -1.3
PDE4D-229ENST00000638939 PRMT6Q96LA8 375 aaPredicted RBP6.95□□□□□ -1.3
PDE4D-229ENST00000638939 VEZTQ9HBM0 779 aa6.95□□□□□ -1.3
PDE4D-229ENST00000638939 FZD1Q9UP38 647 aa6.95□□□□□ -1.3
PDE4D-229ENST00000638939 CHMP3Q9Y3E7 222 aa6.95□□□□□ -1.3
PDE4D-229ENST00000638939 TRIM17Q9Y577 477 aa6.95□□□□□ -1.3
PDE4D-229ENST00000638939 PCDHAC2Q9Y5I4 1007 aa6.95□□□□□ -1.3
PDE4D-229ENST00000638939 UTYO14607 1347 aa6.95□□□□□ -1.3
PDE4D-229ENST00000638939 KIF16BQ96L93 1317 aa6.95□□□□□ -1.3
PDE4D-229ENST00000638939 DOCK3Q8IZD9 2030 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 F6X3S4 739 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 F8W031 263 aaPredicted RBP6.94□□□□□ -1.3
PDE4D-229ENST00000638939 DPYSL4O14531 572 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 ALDH1L1O75891 902 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 MLLT3P42568 568 aaPredicted RBP6.94□□□□□ -1.3
PDE4D-229ENST00000638939 EXOSC9Q06265 439 aaKnown RBP6.94□□□□□ -1.3
PDE4D-229ENST00000638939 MAP2K5Q13163 448 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 TAF7LQ5H9L4 462 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 EPHA10Q5JZY3 1008 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 OPTNQ96CV9 577 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 TEPSINQ96N21 525 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 ZCCHC17Q9NP64 241 aaKnown RBP6.94□□□□□ -1.3
PDE4D-229ENST00000638939 CNNM1Q9NRU3 951 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 PTPN22Q9Y2R2 807 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 MROH5Q6ZUA9 1318 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 FRMPD3Q5JV73 1810 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 COL6A3P12111 3177 aa6.94□□□□□ -1.3
PDE4D-229ENST00000638939 USP2O75604 605 aaPredicted RBP6.93□□□□□ -1.3
PDE4D-229ENST00000638939 HIBADHP31937 336 aaKnown RBP6.93□□□□□ -1.3
PDE4D-229ENST00000638939 CRKP46108 304 aa6.93□□□□□ -1.3
PDE4D-229ENST00000638939 TNNI2P48788 182 aa6.93□□□□□ -1.3
PDE4D-229ENST00000638939 RBM5P52756 815 aaKnown RBP eCLIP6.93□□□□□ -1.3
PDE4D-229ENST00000638939 FOXK1P85037 733 aa6.93□□□□□ -1.3
PDE4D-229ENST00000638939 HDLBPQ00341 1268 aaKnown RBP6.93□□□□□ -1.3
PDE4D-229ENST00000638939 SP3Q02447 781 aa6.93□□□□□ -1.3
PDE4D-229ENST00000638939 VGLL4Q14135 290 aa6.93□□□□□ -1.3
PDE4D-229ENST00000638939 RABL6Q3YEC7 729 aaPredicted RBP6.93□□□□□ -1.3
PDE4D-229ENST00000638939 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.93□□□□□ -1.3
PDE4D-229ENST00000638939 DZIP1LQ8IYY4 767 aaKnown RBP6.93□□□□□ -1.3
PDE4D-229ENST00000638939 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.93□□□□□ -1.3
PDE4D-229ENST00000638939 CD99L2Q8TCZ2 262 aa6.93□□□□□ -1.3
PDE4D-229ENST00000638939 TBC1D22AQ8WUA7 517 aa6.93□□□□□ -1.3
PDE4D-229ENST00000638939 ZNF594Q96JF6 807 aaPredicted RBP6.93□□□□□ -1.3
PDE4D-229ENST00000638939 PTPN18Q99952 460 aa6.93□□□□□ -1.3
PDE4D-229ENST00000638939 SRCIN1Q9C0H9 1055 aa6.93□□□□□ -1.3
PDE4D-229ENST00000638939 MRS2Q9HD23 443 aa6.93□□□□□ -1.3
PDE4D-229ENST00000638939 C9orf78Q9NZ63 289 aaPredicted RBP6.93□□□□□ -1.3
PDE4D-229ENST00000638939 ZNF70Q9UC06 446 aaPredicted RBP6.93□□□□□ -1.3
PDE4D-229ENST00000638939 TTF2Q9UNY4 1162 aaKnown RBP6.93□□□□□ -1.3
PDE4D-229ENST00000638939 MYO5AQ9Y4I1 1855 aaKnown RBP6.93□□□□□ -1.3
PDE4D-229ENST00000638939 MAST3O60307 1309 aa6.93□□□□□ -1.3
PDE4D-229ENST00000638939 SIPA1L1O43166 1804 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 POTEFA5A3E0 1075 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 SPDYE5A6NIY4 337 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 GYG1P46976 350 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 GTF2A2P52657 109 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 MAP3K9P80192 1104 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 FKBP1CQ5VVH2 108 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 FAM83AQ86UY5 434 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 CDAN1Q8IWY9 1227 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 VGLL2Q8N8G2 317 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 BRI3BPQ8WY22 251 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 HOOK2Q96ED9 719 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 KAZALD1Q96I82 304 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 SUCLG2Q96I99 432 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 ZNF333Q96JL9 665 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 FAM84BQ96KN1 310 aaPredicted RBP6.92□□□□□ -1.3
PDE4D-229ENST00000638939 ZDHHC15Q96MV8 337 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 TDRD3Q9H7E2 651 aaKnown RBP6.92□□□□□ -1.3
PDE4D-229ENST00000638939 ELP3Q9H9T3 547 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 EFCC1Q9HA90 598 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 JAG2Q9Y219 1238 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 SUGT1Q9Y2Z0 365 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 RIPOR2Q9Y4F9 1068 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 CSADQ9Y600 493 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 ZNF521Q96K83 1311 aa6.92□□□□□ -1.3
PDE4D-229ENST00000638939 CCL15-CCL14A0A0B4J2E2 113 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 PLIN1O60240 522 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 CAP1Q01518 475 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 ARHGEF6Q15052 776 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 TAF1CQ15572 869 aaPredicted RBP6.91□□□□□ -1.3
PDE4D-229ENST00000638939 CCL15Q16663 113 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 FBXO33Q7Z6M2 555 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 VPS37DQ86XT2 251 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 TEKT1Q969V4 418 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 OTUD5Q96G74 571 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 MRIQ9BWK5 157 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 TMEM39BQ9GZU3 492 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 BICC1Q9H694 974 aaKnown RBP6.91□□□□□ -1.3
PDE4D-229ENST00000638939 ZFYVE28Q9HCC9 887 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 GOPCQ9HD26 462 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 SNCAIPQ9Y6H5 919 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 PLXNB2O15031 1838 aa6.91□□□□□ -1.3
PDE4D-229ENST00000638939 PTPRCP08575 1304 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms