RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 ZKSCAN4Q969J2 545 aaPredicted RBP20.98■□□□□ 0.95
SMN2-216ENST00000638794 HOOK2Q96ED9 719 aa20.98■□□□□ 0.95
SMN2-216ENST00000638794 CAP1Q01518 475 aa20.97■□□□□ 0.95
SMN2-216ENST00000638794 INTS3Q68E01 1043 aaKnown RBP20.97■□□□□ 0.95
SMN2-216ENST00000638794 CDC42EP5Q6NZY7 148 aa20.97■□□□□ 0.95
SMN2-216ENST00000638794 ERO1BQ86YB8 467 aa20.97■□□□□ 0.95
SMN2-216ENST00000638794 FAM43AQ8N2R8 423 aa20.97■□□□□ 0.95
SMN2-216ENST00000638794 ARHGAP45Q92619 1136 aa20.97■□□□□ 0.95
SMN2-216ENST00000638794 MYH2Q9UKX2 1941 aa20.97■□□□□ 0.95
SMN2-216ENST00000638794 SALL1Q9NSC2 1324 aa20.97■□□□□ 0.95
SMN2-216ENST00000638794 LDHBP07195 334 aaKnown RBP20.96■□□□□ 0.95
SMN2-216ENST00000638794 ADORA1P30542 326 aa20.96■□□□□ 0.95
SMN2-216ENST00000638794 NFIAQ12857 509 aa20.96■□□□□ 0.95
SMN2-216ENST00000638794 TAF1CQ15572 869 aaPredicted RBP20.96■□□□□ 0.95
SMN2-216ENST00000638794 DCAF15Q66K64 600 aa20.96■□□□□ 0.95
SMN2-216ENST00000638794 MIGA2Q7L4E1 593 aa20.96■□□□□ 0.95
SMN2-216ENST00000638794 FAM151AQ8WW52 585 aa20.96■□□□□ 0.95
SMN2-216ENST00000638794 EFCC1Q9HA90 598 aa20.96■□□□□ 0.95
SMN2-216ENST00000638794 DENND2AQ9ULE3 1009 aa20.96■□□□□ 0.95
SMN2-216ENST00000638794 PTPN22Q9Y2R2 807 aa20.96■□□□□ 0.95
SMN2-216ENST00000638794 SEMA3EO15041 775 aa20.95■□□□□ 0.94
SMN2-216ENST00000638794 TCP10Q12799 353 aa20.95■□□□□ 0.94
SMN2-216ENST00000638794 ZNF341Q9BYN7 854 aa20.95■□□□□ 0.94
SMN2-216ENST00000638794 ZFYVE28Q9HCC9 887 aa20.95■□□□□ 0.94
SMN2-216ENST00000638794 IRF6O14896 467 aa20.94■□□□□ 0.94
SMN2-216ENST00000638794 GNAI3P08754 354 aa20.94■□□□□ 0.94
SMN2-216ENST00000638794 CCDC102BQ68D86 513 aa20.94■□□□□ 0.94
SMN2-216ENST00000638794 SRGAP3O43295 1099 aa20.93■□□□□ 0.94
SMN2-216ENST00000638794 CETPP11597 493 aa20.93■□□□□ 0.94
SMN2-216ENST00000638794 INPP5BP32019 993 aa20.93■□□□□ 0.94
SMN2-216ENST00000638794 TIMM10P62072 90 aa20.93■□□□□ 0.94
SMN2-216ENST00000638794 PPIL2Q13356 520 aa20.93■□□□□ 0.94
SMN2-216ENST00000638794 USP40Q9NVE5 1235 aa20.93■□□□□ 0.94
SMN2-216ENST00000638794 FAM198AQ9UFP1 575 aa20.93■□□□□ 0.94
SMN2-216ENST00000638794 RBBP6Q7Z6E9 1792 aaKnown RBP20.92■□□□□ 0.94
SMN2-216ENST00000638794 DOCK2Q92608 1830 aa20.92■□□□□ 0.94
SMN2-216ENST00000638794 KIAA0100Q14667 2235 aaKnown RBP20.92■□□□□ 0.94
SMN2-216ENST00000638794 ZBTB22O15209 634 aa20.92■□□□□ 0.94
SMN2-216ENST00000638794 SLC34A2O95436 690 aa20.92■□□□□ 0.94
SMN2-216ENST00000638794 SNAPC2Q13487 334 aa20.92■□□□□ 0.94
SMN2-216ENST00000638794 MTX1Q13505 466 aa20.92■□□□□ 0.94
SMN2-216ENST00000638794 ZSWIM8A7E2V4 1837 aa20.92■□□□□ 0.94
SMN2-216ENST00000638794 BTBD19C9JJ37 291 aa20.91■□□□□ 0.94
SMN2-216ENST00000638794 TRIM27P14373 513 aa20.91■□□□□ 0.94
SMN2-216ENST00000638794 PPATQ06203 517 aa20.91■□□□□ 0.94
SMN2-216ENST00000638794 RASGRF1Q13972 1273 aa20.91■□□□□ 0.94
SMN2-216ENST00000638794 ZGPATQ8N5A5 531 aaKnown RBP20.91■□□□□ 0.94
SMN2-216ENST00000638794 ZNF112Q9UJU3 913 aa20.91■□□□□ 0.94
SMN2-216ENST00000638794 TNNQ9UQP3 1299 aa20.91■□□□□ 0.94
SMN2-216ENST00000638794 PDS5AQ29RF7 1337 aaKnown RBP20.9■□□□□ 0.94
SMN2-216ENST00000638794 A0A1B0GUL7 405 aa20.9■□□□□ 0.94
SMN2-216ENST00000638794 TFCP2Q12800 502 aa20.9■□□□□ 0.94
SMN2-216ENST00000638794 ZFPM1Q8IX07 1006 aa20.9■□□□□ 0.94
SMN2-216ENST00000638794 ZCCHC17Q9NP64 241 aaKnown RBP20.9■□□□□ 0.94
SMN2-216ENST00000638794 GAKO14976 1311 aa20.89■□□□□ 0.93
SMN2-216ENST00000638794 POTEFA5A3E0 1075 aa20.89■□□□□ 0.93
SMN2-216ENST00000638794 TLR2O60603 784 aa20.89■□□□□ 0.93
SMN2-216ENST00000638794 WDHD1O75717 1129 aaPredicted RBP20.89■□□□□ 0.93
SMN2-216ENST00000638794 BCAR3O75815 825 aa20.89■□□□□ 0.93
SMN2-216ENST00000638794 PRPF38BQ5VTL8 546 aaKnown RBP20.89■□□□□ 0.93
SMN2-216ENST00000638794 ATF7IPQ6VMQ6 1270 aa20.89■□□□□ 0.93
SMN2-216ENST00000638794 DZIP1Q86YF9 867 aaKnown RBP20.89■□□□□ 0.93
SMN2-216ENST00000638794 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.89■□□□□ 0.93
SMN2-216ENST00000638794 ARMC5Q96C12 935 aa20.89■□□□□ 0.93
SMN2-216ENST00000638794 XAGE2Q96GT9 111 aa20.89■□□□□ 0.93
SMN2-216ENST00000638794 ABCF2Q9UG63 623 aa20.89■□□□□ 0.93
SMN2-216ENST00000638794 AKAP2Q9Y2D5 859 aa20.89■□□□□ 0.93
SMN2-216ENST00000638794 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.89■□□□□ 0.93
SMN2-216ENST00000638794 RFX7Q2KHR2 1363 aa20.88■□□□□ 0.93
SMN2-216ENST00000638794 IPO8O15397 1037 aaKnown RBP20.88■□□□□ 0.93
SMN2-216ENST00000638794 RGS3P49796 1198 aa20.88■□□□□ 0.93
SMN2-216ENST00000638794 FRAT1Q92837 279 aaPredicted RBP20.88■□□□□ 0.93
SMN2-216ENST00000638794 ATRNL1Q5VV63 1379 aa20.87■□□□□ 0.93
SMN2-216ENST00000638794 MVPQ14764 893 aaKnown RBP20.87■□□□□ 0.93
SMN2-216ENST00000638794 ARHGEF6Q15052 776 aa20.87■□□□□ 0.93
SMN2-216ENST00000638794 IDI2Q9BXS1 227 aa20.87■□□□□ 0.93
SMN2-216ENST00000638794 GNAI2P04899 355 aa20.86■□□□□ 0.93
SMN2-216ENST00000638794 NOL9Q5SY16 702 aaKnown RBP20.86■□□□□ 0.93
SMN2-216ENST00000638794 CLUAP1Q96AJ1 413 aa20.86■□□□□ 0.93
SMN2-216ENST00000638794 NEUROD6Q96NK8 337 aa20.86■□□□□ 0.93
SMN2-216ENST00000638794 ARHGAP39Q9C0H5 1083 aa20.86■□□□□ 0.93
SMN2-216ENST00000638794 KCNH4Q9UQ05 1017 aa20.86■□□□□ 0.93
SMN2-216ENST00000638794 PTCH2Q9Y6C5 1203 aa20.86■□□□□ 0.93
SMN2-216ENST00000638794 ENTPD3O75355 529 aa20.85■□□□□ 0.93
SMN2-216ENST00000638794 LACTBP83111 547 aaPredicted RBP20.85■□□□□ 0.93
SMN2-216ENST00000638794 SPTY2D1Q68D10 685 aaPredicted RBP20.85■□□□□ 0.93
SMN2-216ENST00000638794 FAM163AQ96GL9 167 aaPredicted RBP20.85■□□□□ 0.93
SMN2-216ENST00000638794 MROH7-TTC4A0A0A0MT08 1334 aa20.84■□□□□ 0.93
SMN2-216ENST00000638794 PNMA6EA0A0J9YXQ4 647 aa20.84■□□□□ 0.93
SMN2-216ENST00000638794 BTDP43251 543 aa20.84■□□□□ 0.93
SMN2-216ENST00000638794 MOGSQ13724 837 aa20.84■□□□□ 0.93
SMN2-216ENST00000638794 SH3BP5LQ7L8J4 393 aa20.84■□□□□ 0.93
SMN2-216ENST00000638794 ANKRD23Q86SG2 305 aa20.84■□□□□ 0.93
SMN2-216ENST00000638794 SLF2Q8IX21 1173 aa20.84■□□□□ 0.93
SMN2-216ENST00000638794 ZNF333Q96JL9 665 aa20.84■□□□□ 0.93
SMN2-216ENST00000638794 PHF20L1A8MW92 1017 aa20.83■□□□□ 0.93
SMN2-216ENST00000638794 PDHXO00330 501 aa20.83■□□□□ 0.93
SMN2-216ENST00000638794 MECOMQ03112 1051 aa20.83■□□□□ 0.93
SMN2-216ENST00000638794 KIF22Q14807 665 aa20.83■□□□□ 0.93
SMN2-216ENST00000638794 SLC9C1Q4G0N8 1177 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms