RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 IRF6O14896 467 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 DTNBO60941 627 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 MTX1Q13505 466 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 EIF4A2Q14240 407 aaKnown RBP13.7□□□□□ -0.22
CAPN3-221ENST00000638141 NBPF9Q3BBW0 867 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 ISM2Q6H9L7 571 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 ARHGEF25Q86VW2 580 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 USP28Q96RU2 1077 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 SUGCTQ9HAC7 445 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 RTN2O75298 545 aa13.69□□□□□ -0.22
CAPN3-221ENST00000638141 CCDC175P0C221 793 aa13.69□□□□□ -0.22
CAPN3-221ENST00000638141 ARHGAP25P42331 645 aa13.69□□□□□ -0.22
CAPN3-221ENST00000638141 MYL5Q02045 173 aa13.69□□□□□ -0.22
CAPN3-221ENST00000638141 ICA1Q05084 483 aa13.69□□□□□ -0.22
CAPN3-221ENST00000638141 SULT6B1Q6IMI4 303 aa13.69□□□□□ -0.22
CAPN3-221ENST00000638141 PROSER2Q86WR7 435 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-221ENST00000638141 FAM177A1Q8N128 213 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-221ENST00000638141 CLASRPQ8N2M8 674 aaKnown RBP13.69□□□□□ -0.22
CAPN3-221ENST00000638141 IGSF22Q8N9C0 903 aa13.69□□□□□ -0.22
CAPN3-221ENST00000638141 FAM76AQ8TAV0 307 aa13.69□□□□□ -0.22
CAPN3-221ENST00000638141 TRIM6Q9C030 488 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-221ENST00000638141 HPCAL4Q9UM19 191 aa13.69□□□□□ -0.22
CAPN3-221ENST00000638141 MED1Q15648 1581 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-221ENST00000638141 EIF3HO15372 352 aaKnown RBP eCLIP13.69□□□□□ -0.22
CAPN3-221ENST00000638141 KDM6AO15550 1401 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-221ENST00000638141 PHACTR2O75167 634 aa13.69□□□□□ -0.22
CAPN3-221ENST00000638141 GRIK3Q13003 919 aa13.69□□□□□ -0.22
CAPN3-221ENST00000638141 RFX7Q2KHR2 1363 aa13.69□□□□□ -0.22
CAPN3-221ENST00000638141 N4BP2L2Q92802 583 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-221ENST00000638141 CTAGE15A4D2H0 777 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 SLC3A2P08195 630 aaKnown RBP13.68□□□□□ -0.22
CAPN3-221ENST00000638141 CTAGE8P0CG41 777 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 LMOD1P29536 600 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-221ENST00000638141 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 TOGARAM2Q6ZUX3 1019 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 CTAGE6Q86UF2 777 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 NME9Q86XW9 330 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 ANKRD18AQ8IVF6 992 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 CTAGE4Q8IX94 777 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 TC2NQ8N9U0 490 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 RTEL1Q9NZ71 1219 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 ODF2LQ9ULJ1 636 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 CPS1P31327 1500 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 KIF5CO60282 957 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 FBLN1P23142 703 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 SMTNP53814 917 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 BIRC2Q13490 618 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 TUBE1Q9UJT0 475 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 CAPN7Q9Y6W3 813 aa13.68□□□□□ -0.22
CAPN3-221ENST00000638141 GRIN2DO15399 1336 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 ZEB2O60315 1214 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 JAK2O60674 1132 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 SERPINC1P01008 464 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 ATP1A3P13637 1013 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 ME1P48163 572 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 INHBEP58166 350 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 CFAP100Q494V2 611 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 DPF2Q92785 391 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 NAA15Q9BXJ9 866 aaKnown RBP13.67□□□□□ -0.22
CAPN3-221ENST00000638141 KAT14Q9H8E8 782 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 GGA2Q9UJY4 613 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 A0A1B0GUA9 196 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 NUTM2FA1L443 756 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 PFKFB2O60825 505 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 NUTM2GQ5VZR2 741 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 WWC2Q6AWC2 1192 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 IQCA1Q86XH1 822 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 CCDC50Q8IVM0 306 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 KCNG4Q8TDN1 519 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 COG1Q8WTW3 980 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 MYO1AQ9UBC5 1043 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 PUF60Q9UHX1 559 aaKnown RBP13.67□□□□□ -0.22
CAPN3-221ENST00000638141 PCDHA7Q9UN72 937 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 TECPR2O15040 1411 aa13.67□□□□□ -0.22
CAPN3-221ENST00000638141 TMEM94Q12767 1356 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 TARSL2A2RTX5 802 aaKnown RBP13.66□□□□□ -0.22
CAPN3-221ENST00000638141 MEFVO15553 781 aaPredicted RBP13.66□□□□□ -0.22
CAPN3-221ENST00000638141 ALDH1L1O75891 902 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 NEBLO76041 1014 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 YEATS4O95619 227 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 PANX2Q96RD6 677 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 SH3GL2Q99962 352 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 NCAPD2Q15021 1401 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 XIRP1Q702N8 1843 aaKnown RBP13.66□□□□□ -0.22
CAPN3-221ENST00000638141 FMN2Q9NZ56 1722 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 CTAGE9A4FU28 777 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 SKOR1P84550 965 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 ADCY2Q08462 1091 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 DRP2Q13474 957 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 MICALCLQ6ZW33 695 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 BCAS4Q8TDM0 211 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 ITFG2Q969R8 447 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 CAPS2Q9BXY5 557 aa13.66□□□□□ -0.22
CAPN3-221ENST00000638141 MRPL44Q9H9J2 332 aaKnown RBP13.66□□□□□ -0.22
CAPN3-221ENST00000638141 RASSF9O75901 435 aa13.65□□□□□ -0.22
CAPN3-221ENST00000638141 KIAA0754O94854 1291 aa13.65□□□□□ -0.22
CAPN3-221ENST00000638141 HMGB1P09429 215 aaKnown RBP13.65□□□□□ -0.22
CAPN3-221ENST00000638141 NDUFA8P51970 172 aa13.65□□□□□ -0.22
CAPN3-221ENST00000638141 NMIQ13287 307 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms