RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 DUX4L6P0CJ89 424 aa21.53■■□□□ 1.04
CACNA1A-257ENST00000638009 DUX4L7P0CJ90 424 aa21.53■■□□□ 1.04
CACNA1A-257ENST00000638009 DUX4Q9UBX2 424 aa21.53■■□□□ 1.04
CACNA1A-257ENST00000638009 ARHGAP42A6NI28 874 aa21.53■■□□□ 1.04
CACNA1A-257ENST00000638009 AKR1B15C9JRZ8 316 aaPredicted RBP21.53■■□□□ 1.04
CACNA1A-257ENST00000638009 ATP6V0A1Q93050 837 aa21.53■■□□□ 1.04
CACNA1A-257ENST00000638009 RHOXF2BP0C7M4 288 aa21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 CYP26C1Q6V0L0 522 aa21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 RHOXF2Q9BQY4 288 aa21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 EFHD1Q9BUP0 239 aa21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 BOLA2Q9H3K6 86 aa21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 CAMSAP2Q08AD1 1489 aa21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 PPP1R21Q6ZMI0 780 aa21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 TRIML1Q8N9V2 468 aa21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 TSPY3P0CV98 308 aa21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 TSPY8P0CW00 308 aa21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 BAG1Q99933 345 aaPredicted RBP21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 SPINK5Q9NQ38 1064 aaPredicted RBP21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 HOMER3Q9NSC5 361 aa21.52■■□□□ 1.04
CACNA1A-257ENST00000638009 ZC3H6P61129 1189 aaKnown RBP21.52■■□□□ 1.03
CACNA1A-257ENST00000638009 NAP1L4Q99733 375 aaKnown RBP21.52■■□□□ 1.03
CACNA1A-257ENST00000638009 TPX2Q9ULW0 747 aaKnown RBP21.52■■□□□ 1.03
CACNA1A-257ENST00000638009 BAZ2BQ9UIF8 2168 aaKnown RBP21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 ESCO1Q5FWF5 840 aa21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 MYO9BQ13459 2157 aa21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 NEK1Q96PY6 1258 aa21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 LMNAP02545 664 aaKnown RBP21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 RTN1Q16799 776 aa21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 CFAP221Q4G0U5 840 aa21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 ZBTB43O43298 467 aa21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 KLHDC4Q8TBB5 520 aa21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 CCDC138Q96M89 665 aa21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 TRIM42Q8IWZ5 723 aa21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 SIRT1Q96EB6 747 aa21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 FAM135AQ9P2D6 1515 aa21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 NUCKS1Q9H1E3 243 aaKnown RBP21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 IPO11Q9UI26 975 aaKnown RBP21.51■■□□□ 1.03
CACNA1A-257ENST00000638009 MCM7P33993 719 aa21.5■■□□□ 1.03
CACNA1A-257ENST00000638009 CABP2Q9NPB3 220 aa21.5■■□□□ 1.03
CACNA1A-257ENST00000638009 ARHGEF9O43307 516 aa21.5■■□□□ 1.03
CACNA1A-257ENST00000638009 SPDL1Q96EA4 605 aa21.5■■□□□ 1.03
CACNA1A-257ENST00000638009 BRAPQ7Z569 592 aa21.5■■□□□ 1.03
CACNA1A-257ENST00000638009 RPAINQ86UA6 219 aa21.5■■□□□ 1.03
CACNA1A-257ENST00000638009 BMP2KLQ5H9B9 411 aa21.5■■□□□ 1.03
CACNA1A-257ENST00000638009 CCDC141Q6ZP82 1450 aa21.5■■□□□ 1.03
CACNA1A-257ENST00000638009 CENPKQ9BS16 269 aa21.49■■□□□ 1.03
CACNA1A-257ENST00000638009 SERPINI2O75830 405 aa21.49■■□□□ 1.03
CACNA1A-257ENST00000638009 RASIP1Q5U651 963 aa21.49■■□□□ 1.03
CACNA1A-257ENST00000638009 TMCO5AQ8N6Q1 288 aa21.49■■□□□ 1.03
CACNA1A-257ENST00000638009 IL1RAPL2Q9NP60 686 aa21.49■■□□□ 1.03
CACNA1A-257ENST00000638009 HNRNPCL2B2RXH8 293 aa21.49■■□□□ 1.03
CACNA1A-257ENST00000638009 HNRNPCL1O60812 293 aaKnown RBP21.49■■□□□ 1.03
CACNA1A-257ENST00000638009 AFMP43652 599 aa21.49■■□□□ 1.03
CACNA1A-257ENST00000638009 CNNM4Q6P4Q7 775 aa21.49■■□□□ 1.03
CACNA1A-257ENST00000638009 IMPACTQ9P2X3 320 aa21.49■■□□□ 1.03
CACNA1A-257ENST00000638009 EXOC6BQ9Y2D4 811 aa21.49■■□□□ 1.03
CACNA1A-257ENST00000638009 USP6NLQ92738 828 aa21.49■■□□□ 1.03
CACNA1A-257ENST00000638009 TYW1Q9NV66 732 aaKnown RBP21.49■■□□□ 1.03
CACNA1A-257ENST00000638009 EVCP57679 992 aa21.48■■□□□ 1.03
CACNA1A-257ENST00000638009 KIFC3Q9BVG8 833 aa21.48■■□□□ 1.03
CACNA1A-257ENST00000638009 RNASELQ05823 741 aaKnown RBP21.48■■□□□ 1.03
CACNA1A-257ENST00000638009 BANK1Q8NDB2 785 aa21.48■■□□□ 1.03
CACNA1A-257ENST00000638009 LZTFL1Q9NQ48 299 aa21.48■■□□□ 1.03
CACNA1A-257ENST00000638009 KRT15P19012 456 aa21.48■■□□□ 1.03
CACNA1A-257ENST00000638009 CASC4Q6P4E1 433 aa21.48■■□□□ 1.03
CACNA1A-257ENST00000638009 LRGUKQ96M69 825 aa21.48■■□□□ 1.03
CACNA1A-257ENST00000638009 TRIM75PA6NK02 468 aa21.48■■□□□ 1.03
CACNA1A-257ENST00000638009 LRRC23Q53EV4 343 aaPredicted RBP21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 EFCAB14O75071 495 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 FLOT1O75955 427 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 DPH6Q7L8W6 267 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 DTHD1Q6ZMT9 781 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 TSR2Q969E8 191 aaKnown RBP21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 STX8Q9UNK0 236 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 KRT79Q5XKE5 535 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 KCNH5Q8NCM2 988 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 GLT8D2Q9H1C3 349 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 PPME1Q9Y570 386 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 PPP2R5DQ14738 602 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 BCRP11274 1271 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 AOPEPQ8N6M6 819 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 MYH6P13533 1939 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 GNAT2P19087 354 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 NMIQ13287 307 aaPredicted RBP21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 TRIM68Q6AZZ1 485 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 FNBP1Q96RU3 617 aa21.47■■□□□ 1.03
CACNA1A-257ENST00000638009 TPCN1Q9ULQ1 816 aa21.46■■□□□ 1.03
CACNA1A-257ENST00000638009 NUTM2GQ5VZR2 741 aa21.46■■□□□ 1.03
CACNA1A-257ENST00000638009 IQUBQ8NA54 791 aa21.46■■□□□ 1.03
CACNA1A-257ENST00000638009 DDX54Q8TDD1 881 aaKnown RBP21.46■■□□□ 1.03
CACNA1A-257ENST00000638009 KRT5P13647 590 aa21.46■■□□□ 1.03
CACNA1A-257ENST00000638009 TYRO3Q06418 890 aa21.46■■□□□ 1.03
CACNA1A-257ENST00000638009 PCYT1AP49585 367 aa21.46■■□□□ 1.03
CACNA1A-257ENST00000638009 NFE2L2Q16236 605 aa21.46■■□□□ 1.03
CACNA1A-257ENST00000638009 KCNG1Q9UIX4 513 aa21.46■■□□□ 1.03
CACNA1A-257ENST00000638009 KRT2P35908 639 aa21.46■■□□□ 1.03
CACNA1A-257ENST00000638009 NOP14P78316 857 aaKnown RBP21.46■■□□□ 1.03
CACNA1A-257ENST00000638009 ISM2Q6H9L7 571 aa21.46■■□□□ 1.03
CACNA1A-257ENST00000638009 TEKT1Q969V4 418 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms