RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 CLNS1AP54105 237 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 HDAC1Q13547 482 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 ARHGAP45Q92619 1136 aa20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 SDCCAG3Q96C92 435 aa20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 NAPGQ99747 312 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 ZNF131P52739 623 aa20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 DDX27Q96GQ7 796 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 DAPK3O43293 454 aa20.12■□□□□ 0.81
CACNA1A-247ENST00000637769 PFDN6O15212 129 aa20.11■□□□□ 0.81
CACNA1A-247ENST00000637769 PHLDB3Q6NSJ2 640 aa20.11■□□□□ 0.81
CACNA1A-247ENST00000637769 PPP2R3AQ06190 1150 aa20.11■□□□□ 0.81
CACNA1A-247ENST00000637769 ERO1AQ96HE7 468 aa20.11■□□□□ 0.81
CACNA1A-247ENST00000637769 SMIM23A6NLE4 172 aa20.11■□□□□ 0.81
CACNA1A-247ENST00000637769 TRIM27P14373 513 aa20.11■□□□□ 0.81
CACNA1A-247ENST00000637769 SNX21Q969T3 373 aa20.11■□□□□ 0.81
CACNA1A-247ENST00000637769 SUDS3Q9H7L9 328 aaPredicted RBP20.11■□□□□ 0.81
CACNA1A-247ENST00000637769 MIER3Q7Z3K6 550 aa20.11■□□□□ 0.81
CACNA1A-247ENST00000637769 NAIPQ13075 1403 aa20.11■□□□□ 0.81
CACNA1A-247ENST00000637769 BCRP11274 1271 aa20.11■□□□□ 0.81
CACNA1A-247ENST00000637769 DPH6Q7L8W6 267 aa20.11■□□□□ 0.81
CACNA1A-247ENST00000637769 KMT5BQ4FZB7 885 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 NBPF5PQ86XG9 351 aaPredicted RBP20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 LMOD1P29536 600 aaPredicted RBP20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 PDCD2Q16342 344 aaPredicted RBP20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 EIF2AQ9BY44 585 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 SNRPA1P09661 255 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 SV2BQ7L1I2 683 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 HAUS1Q96CS2 278 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 TMX3Q96JJ7 454 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 GDPD2Q9HCC8 539 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 ZNF277Q9NRM2 450 aaPredicted RBP20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 TRIM35Q9UPQ4 493 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 ASXL1Q8IXJ9 1541 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 PHBP35232 272 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 SLC12A2P55011 1212 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 GBP5Q96PP8 586 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 FLOT1O75955 427 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 LZTFL1Q9NQ48 299 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 KRT5P13647 590 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 ERCC3P19447 782 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 GABPAQ06546 454 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 USP48Q86UV5 1035 aa20.1■□□□□ 0.81
CACNA1A-247ENST00000637769 NUCB1Q02818 461 aa20.09■□□□□ 0.81
CACNA1A-247ENST00000637769 CCDC186Q7Z3E2 898 aa20.09■□□□□ 0.81
CACNA1A-247ENST00000637769 ANKRD20A3Q5VUR7 823 aa20.09■□□□□ 0.81
CACNA1A-247ENST00000637769 NAA16Q6N069 864 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-247ENST00000637769 LARSQ9P2J5 1176 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-247ENST00000637769 EXOC5O00471 708 aa20.09■□□□□ 0.81
CACNA1A-247ENST00000637769 HPDP32754 393 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-247ENST00000637769 TEKT1Q969V4 418 aa20.09■□□□□ 0.81
CACNA1A-247ENST00000637769 F13A1P00488 732 aa20.09■□□□□ 0.81
CACNA1A-247ENST00000637769 CTTNBP2Q8WZ74 1663 aa20.09■□□□□ 0.81
CACNA1A-247ENST00000637769 PSPC1Q8WXF1 523 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-247ENST00000637769 HSP90AA5PQ58FG0 334 aa20.09■□□□□ 0.81
CACNA1A-247ENST00000637769 TRMT1LQ7Z2T5 733 aaKnown RBP20.08■□□□□ 0.81
CACNA1A-247ENST00000637769 DRC3Q9H069 523 aa20.08■□□□□ 0.81
CACNA1A-247ENST00000637769 PAK2Q13177 524 aa20.08■□□□□ 0.81
CACNA1A-247ENST00000637769 PLS1Q14651 629 aa20.08■□□□□ 0.81
CACNA1A-247ENST00000637769 CFAP221Q4G0U5 840 aa20.08■□□□□ 0.81
CACNA1A-247ENST00000637769 DCAF17Q5H9S7 520 aaPredicted RBP20.08■□□□□ 0.81
CACNA1A-247ENST00000637769 GOLGA8CPA6NN73 597 aa20.08■□□□□ 0.81
CACNA1A-247ENST00000637769 INPP1P49441 399 aa20.08■□□□□ 0.81
CACNA1A-247ENST00000637769 VSIG1Q86XK7 387 aa20.08■□□□□ 0.81
CACNA1A-247ENST00000637769 WHAMMQ8TF30 809 aa20.08■□□□□ 0.81
CACNA1A-247ENST00000637769 KRBA2Q6ZNG9 492 aa20.08■□□□□ 0.8
CACNA1A-247ENST00000637769 RHOXF2BP0C7M4 288 aa20.08■□□□□ 0.8
CACNA1A-247ENST00000637769 HAND2P61296 217 aa20.08■□□□□ 0.8
CACNA1A-247ENST00000637769 RPS6KA2Q15349 733 aa20.08■□□□□ 0.8
CACNA1A-247ENST00000637769 ZNF526Q8TF50 670 aaPredicted RBP20.08■□□□□ 0.8
CACNA1A-247ENST00000637769 RHOXF2Q9BQY4 288 aa20.08■□□□□ 0.8
CACNA1A-247ENST00000637769 P4HA1P13674 534 aa20.08■□□□□ 0.8
CACNA1A-247ENST00000637769 FCHSD1Q86WN1 690 aa20.08■□□□□ 0.8
CACNA1A-247ENST00000637769 DACT1Q9NYF0 836 aa20.08■□□□□ 0.8
CACNA1A-247ENST00000637769 ATP6V1E1P36543 226 aa20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 HHATQ5VTY9 493 aa20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 AFG3L2Q9Y4W6 797 aa20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 ZBTB24O43167 697 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 FAM212AQ96EL1 285 aa20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 BAG5Q9UL15 447 aa20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 SLC9C1Q4G0N8 1177 aa20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 SLC4A4Q9Y6R1 1079 aa20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 MYL5Q02045 173 aa20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 YWHAEP62258 255 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 CNPY2Q9Y2B0 182 aa20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 IL15P40933 162 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 GABPB1Q06547 395 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 BIRC2Q13490 618 aa20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 DBN1Q16643 649 aa20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 SMAP1Q8IYB5 467 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 CCDC124Q96CT7 223 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-247ENST00000637769 MCM7P33993 719 aa20.06■□□□□ 0.8
CACNA1A-247ENST00000637769 TNNI2P48788 182 aa20.06■□□□□ 0.8
CACNA1A-247ENST00000637769 ZC3H15Q8WU90 426 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-247ENST00000637769 SETDB2Q96T68 719 aa20.06■□□□□ 0.8
CACNA1A-247ENST00000637769 HSPA8P11142 646 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-247ENST00000637769 Q6ZUG5 572 aa20.06■□□□□ 0.8
CACNA1A-247ENST00000637769 CCDC84Q86UT8 332 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-247ENST00000637769 HACE1Q8IYU2 909 aa20.06■□□□□ 0.8
CACNA1A-247ENST00000637769 RNF34Q969K3 372 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms