RNA–Protein interactions for RNA: ENST00000637624.1

PXN-222, Transcript of paxillin, human

TSL 2

Gene PXN, Length 4,132 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PXN-222	ENST00000637624	RPAIN	Q86UA6	219 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	MICU3	Q86XE3	530 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	DHX58	Q96C10	678 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	LSG1	Q9H089	658 aa	Known RBP	13.81	□□□□□ -0.2
PXN-222	ENST00000637624	PHAX	Q9H814	394 aa	Known RBP	13.81	□□□□□ -0.2
PXN-222	ENST00000637624	ZSWIM6	Q9HCJ5	1215 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	CCDC151	A5D8V7	595 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.81	□□□□□ -0.2
PXN-222	ENST00000637624	STIM1	Q13586	685 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	SPA17	Q15506	151 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	POTED	Q86YR6	584 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	CTCFL	Q8NI51	663 aa	Predicted RBP	13.81	□□□□□ -0.2
PXN-222	ENST00000637624	JPH2	Q9BR39	696 aa	Predicted RBP	13.81	□□□□□ -0.2
PXN-222	ENST00000637624	ATP5J2-PTCD1	G3V325	749 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	XBP1	P17861	261 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	SARNP	P82979	210 aa	Known RBP	13.81	□□□□□ -0.2
PXN-222	ENST00000637624	CCDC129	Q6ZRS4	1044 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	TRMT44	Q8IYL2	757 aa	Known RBP	13.81	□□□□□ -0.2
PXN-222	ENST00000637624	RGS22	Q8NE09	1264 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	TTC41P	Q6P2S7	1318 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	IGSF1	Q8N6C5	1336 aa		13.81	□□□□□ -0.2
PXN-222	ENST00000637624	AMOT	Q4VCS5	1084 aa		13.8	□□□□□ -0.2
PXN-222	ENST00000637624	TM6SF1	Q9BZW5	370 aa		13.8	□□□□□ -0.2
PXN-222	ENST00000637624	NFE2L3	Q9Y4A8	694 aa		13.8	□□□□□ -0.2
PXN-222	ENST00000637624	KIF20B	Q96Q89	1820 aa		13.8	□□□□□ -0.2
PXN-222	ENST00000637624	FRMD3	A2A2Y4	597 aa		13.8	□□□□□ -0.2
PXN-222	ENST00000637624	TUBB	P07437	444 aa		13.8	□□□□□ -0.2
PXN-222	ENST00000637624	NAPG	Q99747	312 aa	Predicted RBP	13.8	□□□□□ -0.2
PXN-222	ENST00000637624		A0A1B0GUA9	196 aa		13.8	□□□□□ -0.2
PXN-222	ENST00000637624	NLRP12	P59046	1061 aa		13.8	□□□□□ -0.2
PXN-222	ENST00000637624	CCDC121	Q6ZUS5	278 aa		13.8	□□□□□ -0.2
PXN-222	ENST00000637624	EFCAB13	Q8IY85	973 aa		13.8	□□□□□ -0.2
PXN-222	ENST00000637624	IGSF22	Q8N9C0	903 aa		13.8	□□□□□ -0.2
PXN-222	ENST00000637624	KIF24	Q5T7B8	1368 aa		13.8	□□□□□ -0.2
PXN-222	ENST00000637624	PLA2G4A	P47712	749 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	MCTP2	Q6DN12	878 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	MON2	Q7Z3U7	1717 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	OPA1	O60313	960 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	ATP1A3	P13637	1013 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	KIF1A	Q12756	1690 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	TOPAZ1	Q8N9V7	1692 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	GOLGA6B	A6NDN3	693 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	SPECC1	Q5M775	1068 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	MMS22L	Q6ZRQ5	1243 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	NDUFB9	Q9Y6M9	179 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	PHLPP2	Q6ZVD8	1323 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624		A0A087WUV0	522 aa	Predicted RBP	13.79	□□□□□ -0.2
PXN-222	ENST00000637624	CHL1	O00533	1208 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	MARCH6	O60337	910 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	FAM71B	Q8TC56	605 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	PGBD1	Q96JS3	809 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	CCDC113	Q9H0I3	377 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	FANCL	Q9NW38	375 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	MAP3K2	Q9Y2U5	619 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	SAMM50	Q9Y512	469 aa		13.79	□□□□□ -0.2
PXN-222	ENST00000637624	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.78	□□□□□ -0.2
PXN-222	ENST00000637624	NDUFA8	P51970	172 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	CKAP4	Q07065	602 aa	Known RBP	13.78	□□□□□ -0.2
PXN-222	ENST00000637624	LRCH2	Q5VUJ6	765 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	AKAP12	Q02952	1782 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	CCT6A	P40227	531 aa	Known RBP	13.78	□□□□□ -0.2
PXN-222	ENST00000637624	TUBB4B	P68371	445 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
PXN-222	ENST00000637624	ENOX2	Q16206	610 aa	Known RBP	13.78	□□□□□ -0.2
PXN-222	ENST00000637624	BICDL1	Q6ZP65	573 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	ALG1	Q9BT22	464 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	MTMR7	Q9Y216	660 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	MAP2	P11137	1827 aa	Known RBP	13.78	□□□□□ -0.2
PXN-222	ENST00000637624	RNF40	O75150	1001 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	CLSTN1	O94985	981 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	IL2RB	P14784	551 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	GNGT1	P63211	74 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	E4F1	Q66K89	784 aa	Predicted RBP	13.78	□□□□□ -0.2
PXN-222	ENST00000637624	DHX32	Q7L7V1	743 aa	Known RBP	13.78	□□□□□ -0.2
PXN-222	ENST00000637624	EDC3	Q96F86	508 aa	Known RBP	13.78	□□□□□ -0.2
PXN-222	ENST00000637624	SNRK	Q9NRH2	765 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	CHPF2	Q9P2E5	772 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.78	□□□□□ -0.2
PXN-222	ENST00000637624	PXDN	Q92626	1479 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	LTBP4	Q8N2S1	1624 aa		13.78	□□□□□ -0.2
PXN-222	ENST00000637624	B4GALNT4	Q76KP1	1039 aa		13.77	□□□□□ -0.2
PXN-222	ENST00000637624	TADA2B	Q86TJ2	420 aa		13.77	□□□□□ -0.2
PXN-222	ENST00000637624	TEX2	Q8IWB9	1127 aa		13.77	□□□□□ -0.2
PXN-222	ENST00000637624	PCDHA7	Q9UN72	937 aa		13.77	□□□□□ -0.2
PXN-222	ENST00000637624	ZMYND10	O75800	440 aa		13.77	□□□□□ -0.21
PXN-222	ENST00000637624	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.77	□□□□□ -0.21	5e-9	■□□□□ 8.6
PXN-222	ENST00000637624	SRGAP1	Q7Z6B7	1085 aa		13.77	□□□□□ -0.21
PXN-222	ENST00000637624	ZCRB1	Q8TBF4	217 aa	Known RBP	13.77	□□□□□ -0.21
PXN-222	ENST00000637624	CEP89	Q96ST8	783 aa		13.77	□□□□□ -0.21
PXN-222	ENST00000637624	UBAC1	Q9BSL1	405 aa		13.77	□□□□□ -0.21
PXN-222	ENST00000637624	TANGO6	Q9C0B7	1094 aa		13.77	□□□□□ -0.21
PXN-222	ENST00000637624	ZBTB3	Q9H5J0	574 aa		13.77	□□□□□ -0.21
PXN-222	ENST00000637624	FHOD1	Q9Y613	1164 aa		13.77	□□□□□ -0.21
PXN-222	ENST00000637624	HPD	P32754	393 aa	Predicted RBP	13.77	□□□□□ -0.21
PXN-222	ENST00000637624	PEX19	P40855	299 aa		13.77	□□□□□ -0.21
PXN-222	ENST00000637624	CCZ1B	P86790	482 aa		13.77	□□□□□ -0.21
PXN-222	ENST00000637624	CCZ1	P86791	482 aa	Predicted RBP	13.77	□□□□□ -0.21
PXN-222	ENST00000637624	SPECC1L	Q69YQ0	1117 aa		13.77	□□□□□ -0.21
PXN-222	ENST00000637624	ABCB6	Q9NP58	842 aa		13.77	□□□□□ -0.21
PXN-222	ENST00000637624	WDR17	Q8IZU2	1322 aa		13.76	□□□□□ -0.21

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