RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 GREM2Q9H772 168 aa6.4□□□□□ -1.39
CHD2-227ENST00000637572 BSDC1Q9NW68 430 aaPredicted RBP6.4□□□□□ -1.39
CHD2-227ENST00000637572 IQSEC3Q9UPP2 1182 aaPredicted RBP6.4□□□□□ -1.39
CHD2-227ENST00000637572 MBD4O95243 580 aa6.4□□□□□ -1.39
CHD2-227ENST00000637572 SSTR3P32745 418 aaPredicted RBP6.4□□□□□ -1.39
CHD2-227ENST00000637572 GRAPQ13588 217 aa6.4□□□□□ -1.39
CHD2-227ENST00000637572 KLHDC4Q8TBB5 520 aa6.4□□□□□ -1.39
CHD2-227ENST00000637572 GRAPLQ8TC17 118 aaPredicted RBP6.4□□□□□ -1.39
CHD2-227ENST00000637572 EAF2Q96CJ1 260 aaPredicted RBP6.4□□□□□ -1.39
CHD2-227ENST00000637572 ZNF804BA4D1E1 1349 aa6.4□□□□□ -1.39
CHD2-227ENST00000637572 KLF18A0A0U1RQI7 1052 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 CCDC194A0A1B0GVG4 234 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 PRAMEF22A3QJZ6 481 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 RIMBP2O15034 1052 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 PRPF40AO75400 957 aaKnown RBP6.39□□□□□ -1.39
CHD2-227ENST00000637572 COL5A2P05997 1499 aaPredicted RBP6.39□□□□□ -1.39
CHD2-227ENST00000637572 ZNF76P36508 570 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 HAND2P61296 217 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 TNFAIP1Q13829 316 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 RTN1Q16799 776 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 CCDC102BQ68D86 513 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 MARCH10Q8NA82 808 aaPredicted RBP6.39□□□□□ -1.39
CHD2-227ENST00000637572 BRF1Q92994 677 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 ORC3Q9UBD5 711 aaPredicted RBP6.39□□□□□ -1.39
CHD2-227ENST00000637572 MYO5BQ9ULV0 1848 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 GPAA1O43292 621 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 PRC1O43663 620 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 IPO7O95373 1038 aaKnown RBP6.39□□□□□ -1.39
CHD2-227ENST00000637572 ATP2B1P20020 1258 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 CALML3P27482 149 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 EIF5P55010 431 aaKnown RBP6.39□□□□□ -1.39
CHD2-227ENST00000637572 TXNRD1Q16881 649 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 RUFY3Q7L099 469 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 GLT8D2Q9H1C3 349 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 ARPP21Q9UBL0 812 aaPredicted RBP6.39□□□□□ -1.39
CHD2-227ENST00000637572 STX8Q9UNK0 236 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 ABCC12Q96J65 1359 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 C2orf72A6NCS6 295 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 PPEF1O14829 653 aaPredicted RBP6.39□□□□□ -1.39
CHD2-227ENST00000637572 CCDC192P0DO97 292 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 NLRP5P59047 1200 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 TMEM266Q2M3C6 531 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 TTLL11Q8NHH1 800 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 MASTLQ96GX5 879 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 TMX3Q96JJ7 454 aa6.39□□□□□ -1.39
CHD2-227ENST00000637572 RPAP1Q9BWH6 1393 aaPredicted RBP6.39□□□□□ -1.39
CHD2-227ENST00000637572 CTAGE5O15320 804 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 STX6O43752 255 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 TAF5LO75529 589 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 IGKV5-2P06315 115 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 MCM4P33991 863 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 MRE11P49959 708 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 PTPN12Q05209 780 aaKnown RBP6.38□□□□□ -1.39
CHD2-227ENST00000637572 ATL3Q6DD88 541 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 RTKN2Q8IZC4 609 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 FNBP4Q8N3X1 1017 aaPredicted RBP6.38□□□□□ -1.39
CHD2-227ENST00000637572 DDX11Q96FC9 970 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 LLPHQ9BRT6 129 aaKnown RBP6.38□□□□□ -1.39
CHD2-227ENST00000637572 SYT17Q9BSW7 474 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 CDHR5Q9HBB8 845 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 B4DLN1 442 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 PATL2C9JE40 543 aaKnown RBP6.38□□□□□ -1.39
CHD2-227ENST00000637572 PPIP5K2O43314 1243 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 AP1G2O75843 785 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 SMC2O95347 1197 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 DEKP35659 375 aaKnown RBP6.38□□□□□ -1.39
CHD2-227ENST00000637572 ZAP70P43403 619 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 MRPL12P52815 198 aaKnown RBP6.38□□□□□ -1.39
CHD2-227ENST00000637572 EAPPQ56P03 285 aaPredicted RBP6.38□□□□□ -1.39
CHD2-227ENST00000637572 MICU3Q86XE3 530 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 TEKT1Q969V4 418 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 TNS2Q63HR2 1409 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 PES1O00541 588 aaKnown RBP6.38□□□□□ -1.39
CHD2-227ENST00000637572 BAG4O95429 457 aaKnown RBP6.38□□□□□ -1.39
CHD2-227ENST00000637572 ERFEQ4G0M1 354 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 SUSD4Q5VX71 490 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 SLC16A10Q8TF71 515 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 NAP1L4Q99733 375 aaKnown RBP6.38□□□□□ -1.39
CHD2-227ENST00000637572 LZTS2Q9BRK4 669 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 CCDC39Q9UFE4 941 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 RFX7Q2KHR2 1363 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 KRT18P05783 430 aaKnown RBP6.38□□□□□ -1.39
CHD2-227ENST00000637572 GJB2P29033 226 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 FILIP1LQ4L180 1135 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 CCDC93Q567U6 631 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 Q6ZUG5 572 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 CEP57L1Q8IYX8 460 aa6.38□□□□□ -1.39
CHD2-227ENST00000637572 ABT1Q9ULW3 272 aaKnown RBP6.38□□□□□ -1.39
CHD2-227ENST00000637572 ZNF142P52746 1687 aaPredicted RBP6.38□□□□□ -1.39
CHD2-227ENST00000637572 FMN2Q9NZ56 1722 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 SPDYE16A6NNV3 312 aaPredicted RBP6.37□□□□□ -1.39
CHD2-227ENST00000637572 F8W031 263 aaPredicted RBP6.37□□□□□ -1.39
CHD2-227ENST00000637572 TBC1D12O60347 775 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 CREBRFQ8IUR6 639 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 MIGA1Q8NAN2 632 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 LRRC27Q9C0I9 530 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 TNMDQ9H2S6 317 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 PNMA2Q9UL42 364 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 ABCC6O95255 1503 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 ZNF532Q9HCE3 1301 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms