RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 CTU1Q7Z7A3 348 aaKnown RBP23.38■■□□□ 1.33
CLN6-221ENST00000637494 IFNL1Q8IU54 200 aa23.38■■□□□ 1.33
CLN6-221ENST00000637494 RPAP1Q9BWH6 1393 aaPredicted RBP23.38■■□□□ 1.33
CLN6-221ENST00000637494 ATP8B2P98198 1209 aa23.37■■□□□ 1.33
CLN6-221ENST00000637494 NOM1Q5C9Z4 860 aaKnown RBP23.37■■□□□ 1.33
CLN6-221ENST00000637494 CDAN1Q8IWY9 1227 aa23.37■■□□□ 1.33
CLN6-221ENST00000637494 FAM151AQ8WW52 585 aa23.37■■□□□ 1.33
CLN6-221ENST00000637494 OPTNQ96CV9 577 aa23.37■■□□□ 1.33
CLN6-221ENST00000637494 CFHR5Q9BXR6 569 aa23.37■■□□□ 1.33
CLN6-221ENST00000637494 USP40Q9NVE5 1235 aa23.37■■□□□ 1.33
CLN6-221ENST00000637494 GPR25O00155 361 aa23.36■■□□□ 1.33
CLN6-221ENST00000637494 CDC42EP5Q6NZY7 148 aa23.36■■□□□ 1.33
CLN6-221ENST00000637494 UQCRFS1P1P0C7P4 283 aa23.35■■□□□ 1.33
CLN6-221ENST00000637494 POLA2Q14181 598 aa23.35■■□□□ 1.33
CLN6-221ENST00000637494 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.35■■□□□ 1.33
CLN6-221ENST00000637494 ERICH6Q7L0X2 663 aa23.35■■□□□ 1.33
CLN6-221ENST00000637494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.35■■□□□ 1.33
CLN6-221ENST00000637494 ZNF296Q8WUU4 475 aaPredicted RBP23.35■■□□□ 1.33
CLN6-221ENST00000637494 ZBTB7BO15156 539 aaPredicted RBP23.34■■□□□ 1.33
CLN6-221ENST00000637494 SURF6O75683 361 aaKnown RBP23.34■■□□□ 1.33
CLN6-221ENST00000637494 TCP10Q12799 353 aa23.34■■□□□ 1.33
CLN6-221ENST00000637494 VGLL4Q14135 290 aa23.34■■□□□ 1.33
CLN6-221ENST00000637494 SSH3Q8TE77 659 aa23.34■■□□□ 1.33
CLN6-221ENST00000637494 WRNIP1Q96S55 665 aa23.34■■□□□ 1.33
CLN6-221ENST00000637494 ZNF341Q9BYN7 854 aa23.34■■□□□ 1.33
CLN6-221ENST00000637494 C1orf115Q9H7X2 142 aa23.34■■□□□ 1.33
CLN6-221ENST00000637494 FKTNO75072 461 aa23.33■■□□□ 1.33
CLN6-221ENST00000637494 RLBP1P12271 317 aa23.33■■□□□ 1.33
CLN6-221ENST00000637494 GTF2A2P52657 109 aa23.33■■□□□ 1.33
CLN6-221ENST00000637494 PKN2Q16513 984 aaKnown RBP23.33■■□□□ 1.33
CLN6-221ENST00000637494 SPATA5Q8NB90 893 aa23.33■■□□□ 1.33
CLN6-221ENST00000637494 GPR108Q9NPR9 543 aa23.33■■□□□ 1.33
CLN6-221ENST00000637494 OTOFQ9HC10 1997 aa23.32■■□□□ 1.32
CLN6-221ENST00000637494 GJA5P36382 358 aa23.32■■□□□ 1.32
CLN6-221ENST00000637494 GSTO1P78417 241 aa23.32■■□□□ 1.32
CLN6-221ENST00000637494 CCDC158Q5M9N0 1113 aa23.32■■□□□ 1.32
CLN6-221ENST00000637494 OTUD5Q96G74 571 aa23.32■■□□□ 1.32
CLN6-221ENST00000637494 IGF2BP3O00425 579 aaKnown RBP eCLIP23.31■■□□□ 1.32
CLN6-221ENST00000637494 WDHD1O75717 1129 aaPredicted RBP23.31■■□□□ 1.32
CLN6-221ENST00000637494 LDHCP07864 332 aa23.31■■□□□ 1.32
CLN6-221ENST00000637494 ARID4AP29374 1257 aaPredicted RBP23.31■■□□□ 1.32
CLN6-221ENST00000637494 TTC39AQ5SRH9 613 aa23.31■■□□□ 1.32
CLN6-221ENST00000637494 ERO1BQ86YB8 467 aa23.31■■□□□ 1.32
CLN6-221ENST00000637494 HMG20BQ9P0W2 317 aa23.31■■□□□ 1.32
CLN6-221ENST00000637494 GAKO14976 1311 aa23.31■■□□□ 1.32
CLN6-221ENST00000637494 LAMB1P07942 1786 aa23.3■■□□□ 1.32
CLN6-221ENST00000637494 TNNI3KQ59H18 835 aa23.3■■□□□ 1.32
CLN6-221ENST00000637494 MIGA2Q7L4E1 593 aa23.3■■□□□ 1.32
CLN6-221ENST00000637494 FAM163AQ96GL9 167 aaPredicted RBP23.3■■□□□ 1.32
CLN6-221ENST00000637494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.3■■□□□ 1.32
CLN6-221ENST00000637494 FPGT-TNNI3KV9GXZ4 949 aa23.3■■□□□ 1.32
CLN6-221ENST00000637494 CCL15-CCL14A0A0B4J2E2 113 aa23.29■■□□□ 1.32
CLN6-221ENST00000637494 TESPA1A2RU30 521 aaPredicted RBP23.29■■□□□ 1.32
CLN6-221ENST00000637494 SPDYE5A6NIY4 337 aa23.29■■□□□ 1.32
CLN6-221ENST00000637494 ENTPD3O75355 529 aa23.29■■□□□ 1.32
CLN6-221ENST00000637494 BTDP43251 543 aa23.29■■□□□ 1.32
CLN6-221ENST00000637494 NFIAQ12857 509 aa23.29■■□□□ 1.32
CLN6-221ENST00000637494 CCL15Q16663 113 aa23.29■■□□□ 1.32
CLN6-221ENST00000637494 ZSCAN29Q8IWY8 852 aaPredicted RBP23.29■■□□□ 1.32
CLN6-221ENST00000637494 ZKSCAN4Q969J2 545 aaPredicted RBP23.29■■□□□ 1.32
CLN6-221ENST00000637494 RAI14Q9P0K7 980 aa23.29■■□□□ 1.32
CLN6-221ENST00000637494 MYH2Q9UKX2 1941 aa23.29■■□□□ 1.32
CLN6-221ENST00000637494 MROH7-TTC4A0A0A0MT08 1334 aa23.29■■□□□ 1.32
CLN6-221ENST00000637494 MECOMQ03112 1051 aa23.28■■□□□ 1.32
CLN6-221ENST00000637494 PANK1Q8TE04 598 aa23.28■■□□□ 1.32
CLN6-221ENST00000637494 NOL10Q9BSC4 688 aaKnown RBP23.28■■□□□ 1.32
CLN6-221ENST00000637494 IDI2Q9BXS1 227 aa23.28■■□□□ 1.32
CLN6-221ENST00000637494 LRP2BPQ9P2M1 347 aa23.28■■□□□ 1.32
CLN6-221ENST00000637494 FAM198AQ9UFP1 575 aa23.28■■□□□ 1.32
CLN6-221ENST00000637494 SNCAIPQ9Y6H5 919 aa23.28■■□□□ 1.32
CLN6-221ENST00000637494 AK9Q5TCS8 1911 aa23.27■■□□□ 1.32
CLN6-221ENST00000637494 CETPP11597 493 aa23.27■■□□□ 1.32
CLN6-221ENST00000637494 RGS3P49796 1198 aa23.27■■□□□ 1.32
CLN6-221ENST00000637494 CNKSR2Q8WXI2 1034 aa23.27■■□□□ 1.32
CLN6-221ENST00000637494 MS4A4AQ96JQ5 239 aa23.27■■□□□ 1.32
CLN6-221ENST00000637494 CHMP4BQ9H444 224 aaKnown RBP23.27■■□□□ 1.32
CLN6-221ENST00000637494 NOP58Q9Y2X3 529 aaKnown RBP23.27■■□□□ 1.32
CLN6-221ENST00000637494 MAP4K4O95819 1239 aaPredicted RBP23.26■■□□□ 1.31
CLN6-221ENST00000637494 SNAPC2Q13487 334 aa23.26■■□□□ 1.31
CLN6-221ENST00000637494 ERC1Q8IUD2 1116 aa23.26■■□□□ 1.31
CLN6-221ENST00000637494 R3HDMLQ9H3Y0 253 aa23.26■■□□□ 1.31
CLN6-221ENST00000637494 MCAMP43121 646 aa23.25■■□□□ 1.31
CLN6-221ENST00000637494 PPATQ06203 517 aa23.25■■□□□ 1.31
CLN6-221ENST00000637494 CRHR2Q13324 411 aa23.25■■□□□ 1.31
CLN6-221ENST00000637494 PPIL2Q13356 520 aa23.25■■□□□ 1.31
CLN6-221ENST00000637494 CEP85Q6P2H3 762 aa23.25■■□□□ 1.31
CLN6-221ENST00000637494 PI16Q6UXB8 463 aa23.25■■□□□ 1.31
CLN6-221ENST00000637494 TBC1D9Q6ZT07 1266 aa23.25■■□□□ 1.31
CLN6-221ENST00000637494 ERO1AQ96HE7 468 aa23.25■■□□□ 1.31
CLN6-221ENST00000637494 PTPN18Q99952 460 aa23.25■■□□□ 1.31
CLN6-221ENST00000637494 ZFYVE28Q9HCC9 887 aa23.25■■□□□ 1.31
CLN6-221ENST00000637494 GPR75-ASB3A0A0A6YYF3 556 aa23.24■■□□□ 1.31
CLN6-221ENST00000637494 INPP5BP32019 993 aa23.24■■□□□ 1.31
CLN6-221ENST00000637494 PICALMQ13492 652 aa23.24■■□□□ 1.31
CLN6-221ENST00000637494 TAF1CQ15572 869 aaPredicted RBP23.24■■□□□ 1.31
CLN6-221ENST00000637494 HSP90AB4PQ58FF6 505 aa23.24■■□□□ 1.31
CLN6-221ENST00000637494 BRI3BPQ8WY22 251 aa23.24■■□□□ 1.31
CLN6-221ENST00000637494 NSUN4Q96CB9 384 aaKnown RBP23.24■■□□□ 1.31
CLN6-221ENST00000637494 DBNDD2Q9BQY9 259 aa23.24■■□□□ 1.31
CLN6-221ENST00000637494 RCAN3Q9UKA8 241 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms