RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 PHKA1P46020 1223 aa22.96■■□□□ 1.27
CLN6-220ENST00000637450 DCAF15Q66K64 600 aa22.96■■□□□ 1.27
CLN6-220ENST00000637450 CDC42EP5Q6NZY7 148 aa22.96■■□□□ 1.27
CLN6-220ENST00000637450 ERO1BQ86YB8 467 aa22.96■■□□□ 1.27
CLN6-220ENST00000637450 SALL1Q9NSC2 1324 aa22.96■■□□□ 1.27
CLN6-220ENST00000637450 RPAP1Q9BWH6 1393 aaPredicted RBP22.96■■□□□ 1.27
CLN6-220ENST00000637450 OTOFQ9HC10 1997 aa22.96■■□□□ 1.27
CLN6-220ENST00000637450 GNAI3P08754 354 aa22.95■■□□□ 1.26
CLN6-220ENST00000637450 FAM43AQ8N2R8 423 aa22.95■■□□□ 1.26
CLN6-220ENST00000637450 PTPN22Q9Y2R2 807 aa22.95■■□□□ 1.26
CLN6-220ENST00000637450 PDE4DIPQ5VU43 2346 aa22.94■■□□□ 1.26
CLN6-220ENST00000637450 ADORA1P30542 326 aa22.94■■□□□ 1.26
CLN6-220ENST00000637450 TAF1CQ15572 869 aaPredicted RBP22.94■■□□□ 1.26
CLN6-220ENST00000637450 CCDC102BQ68D86 513 aa22.94■■□□□ 1.26
CLN6-220ENST00000637450 MIGA2Q7L4E1 593 aa22.94■■□□□ 1.26
CLN6-220ENST00000637450 ZNF341Q9BYN7 854 aa22.94■■□□□ 1.26
CLN6-220ENST00000637450 EFCC1Q9HA90 598 aa22.94■■□□□ 1.26
CLN6-220ENST00000637450 ZFYVE28Q9HCC9 887 aa22.94■■□□□ 1.26
CLN6-220ENST00000637450 IRF6O14896 467 aa22.93■■□□□ 1.26
CLN6-220ENST00000637450 CETPP11597 493 aa22.93■■□□□ 1.26
CLN6-220ENST00000637450 TIMM10P62072 90 aa22.93■■□□□ 1.26
CLN6-220ENST00000637450 CAP1Q01518 475 aa22.93■■□□□ 1.26
CLN6-220ENST00000637450 NFIAQ12857 509 aa22.93■■□□□ 1.26
CLN6-220ENST00000637450 MTX1Q13505 466 aa22.93■■□□□ 1.26
CLN6-220ENST00000637450 USP40Q9NVE5 1235 aa22.93■■□□□ 1.26
CLN6-220ENST00000637450 SRGAP3O43295 1099 aa22.92■■□□□ 1.26
CLN6-220ENST00000637450 TCP10Q12799 353 aa22.92■■□□□ 1.26
CLN6-220ENST00000637450 PPIL2Q13356 520 aa22.92■■□□□ 1.26
CLN6-220ENST00000637450 ZNF112Q9UJU3 913 aa22.92■■□□□ 1.26
CLN6-220ENST00000637450 IPO8O15397 1037 aaKnown RBP22.91■■□□□ 1.26
CLN6-220ENST00000637450 PPATQ06203 517 aa22.91■■□□□ 1.26
CLN6-220ENST00000637450 SNAPC2Q13487 334 aa22.91■■□□□ 1.26
CLN6-220ENST00000637450 ZGPATQ8N5A5 531 aaKnown RBP22.91■■□□□ 1.26
CLN6-220ENST00000637450 FAM198AQ9UFP1 575 aa22.91■■□□□ 1.26
CLN6-220ENST00000637450 BTBD19C9JJ37 291 aa22.9■■□□□ 1.26
CLN6-220ENST00000637450 INPP5BP32019 993 aa22.9■■□□□ 1.26
CLN6-220ENST00000637450 TFCP2Q12800 502 aa22.9■■□□□ 1.26
CLN6-220ENST00000637450 ZCCHC17Q9NP64 241 aaKnown RBP22.9■■□□□ 1.26
CLN6-220ENST00000637450 AKAP2Q9Y2D5 859 aa22.9■■□□□ 1.26
CLN6-220ENST00000637450 CENPFP49454 3210 aa22.89■■□□□ 1.25
CLN6-220ENST00000637450 TRIM27P14373 513 aa22.89■■□□□ 1.25
CLN6-220ENST00000637450 RASGRF1Q13972 1273 aa22.89■■□□□ 1.25
CLN6-220ENST00000637450 PDS5AQ29RF7 1337 aaKnown RBP22.88■■□□□ 1.25
CLN6-220ENST00000637450 A0A1B0GUL7 405 aa22.88■■□□□ 1.25
CLN6-220ENST00000637450 TLR2O60603 784 aa22.88■■□□□ 1.25
CLN6-220ENST00000637450 WDHD1O75717 1129 aaPredicted RBP22.88■■□□□ 1.25
CLN6-220ENST00000637450 BCAR3O75815 825 aa22.88■■□□□ 1.25
CLN6-220ENST00000637450 SLC34A2O95436 690 aa22.88■■□□□ 1.25
CLN6-220ENST00000637450 ARHGEF6Q15052 776 aa22.88■■□□□ 1.25
CLN6-220ENST00000637450 ATF7IPQ6VMQ6 1270 aa22.88■■□□□ 1.25
CLN6-220ENST00000637450 ZFPM1Q8IX07 1006 aa22.88■■□□□ 1.25
CLN6-220ENST00000637450 XAGE2Q96GT9 111 aa22.88■■□□□ 1.25
CLN6-220ENST00000637450 IDI2Q9BXS1 227 aa22.88■■□□□ 1.25
CLN6-220ENST00000637450 GAKO14976 1311 aa22.87■■□□□ 1.25
CLN6-220ENST00000637450 ARMC5Q96C12 935 aa22.87■■□□□ 1.25
CLN6-220ENST00000637450 FAM163AQ96GL9 167 aaPredicted RBP22.87■■□□□ 1.25
CLN6-220ENST00000637450 TNNQ9UQP3 1299 aa22.87■■□□□ 1.25
CLN6-220ENST00000637450 GNAI2P04899 355 aa22.86■■□□□ 1.25
CLN6-220ENST00000637450 MVPQ14764 893 aaKnown RBP22.86■■□□□ 1.25
CLN6-220ENST00000637450 NOL9Q5SY16 702 aaKnown RBP22.86■■□□□ 1.25
CLN6-220ENST00000637450 FRAT1Q92837 279 aaPredicted RBP22.86■■□□□ 1.25
CLN6-220ENST00000637450 ABCF2Q9UG63 623 aa22.86■■□□□ 1.25
CLN6-220ENST00000637450 KCNH4Q9UQ05 1017 aa22.86■■□□□ 1.25
CLN6-220ENST00000637450 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.86■■□□□ 1.25
CLN6-220ENST00000637450 ENTPD3O75355 529 aa22.85■■□□□ 1.25
CLN6-220ENST00000637450 RGS3P49796 1198 aa22.85■■□□□ 1.25
CLN6-220ENST00000637450 PRPF38BQ5VTL8 546 aaKnown RBP22.85■■□□□ 1.25
CLN6-220ENST00000637450 SPTY2D1Q68D10 685 aaPredicted RBP22.85■■□□□ 1.25
CLN6-220ENST00000637450 DZIP1Q86YF9 867 aaKnown RBP22.85■■□□□ 1.25
CLN6-220ENST00000637450 SLF2Q8IX21 1173 aa22.85■■□□□ 1.25
CLN6-220ENST00000637450 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.85■■□□□ 1.25
CLN6-220ENST00000637450 POTEFA5A3E0 1075 aa22.84■■□□□ 1.25
CLN6-220ENST00000637450 NEUROD6Q96NK8 337 aa22.84■■□□□ 1.25
CLN6-220ENST00000637450 MYH13Q9UKX3 1938 aa22.84■■□□□ 1.25
CLN6-220ENST00000637450 ANKRD23Q86SG2 305 aa22.83■■□□□ 1.25
CLN6-220ENST00000637450 CLUAP1Q96AJ1 413 aa22.83■■□□□ 1.25
CLN6-220ENST00000637450 MKI67P46013 3256 aaKnown RBP22.83■■□□□ 1.24
CLN6-220ENST00000637450 ATRNL1Q5VV63 1379 aa22.82■■□□□ 1.24
CLN6-220ENST00000637450 PNMA6EA0A0J9YXQ4 647 aa22.82■■□□□ 1.24
CLN6-220ENST00000637450 PHF20L1A8MW92 1017 aa22.82■■□□□ 1.24
CLN6-220ENST00000637450 LACTBP83111 547 aaPredicted RBP22.82■■□□□ 1.24
CLN6-220ENST00000637450 MAP3K10Q02779 954 aa22.82■■□□□ 1.24
CLN6-220ENST00000637450 MOGSQ13724 837 aa22.82■■□□□ 1.24
CLN6-220ENST00000637450 SH3BP5LQ7L8J4 393 aa22.82■■□□□ 1.24
CLN6-220ENST00000637450 PTCH2Q9Y6C5 1203 aa22.82■■□□□ 1.24
CLN6-220ENST00000637450 RFX7Q2KHR2 1363 aa22.81■■□□□ 1.24
CLN6-220ENST00000637450 PDHXO00330 501 aa22.81■■□□□ 1.24
CLN6-220ENST00000637450 BTDP43251 543 aa22.81■■□□□ 1.24
CLN6-220ENST00000637450 MECOMQ03112 1051 aa22.81■■□□□ 1.24
CLN6-220ENST00000637450 G3BP1Q13283 466 aaKnown RBP eCLIP22.81■■□□□ 1.24
CLN6-220ENST00000637450 KIF22Q14807 665 aa22.81■■□□□ 1.24
CLN6-220ENST00000637450 C17orf99Q6UX52 265 aa22.81■■□□□ 1.24
CLN6-220ENST00000637450 ERICH6Q7L0X2 663 aa22.81■■□□□ 1.24
CLN6-220ENST00000637450 ZNF333Q96JL9 665 aa22.81■■□□□ 1.24
CLN6-220ENST00000637450 ARHGAP39Q9C0H5 1083 aa22.81■■□□□ 1.24
CLN6-220ENST00000637450 DDX4Q9NQI0 724 aaKnown RBP22.81■■□□□ 1.24
CLN6-220ENST00000637450 HMG20BQ9P0W2 317 aa22.81■■□□□ 1.24
CLN6-220ENST00000637450 BRCA2P51587 3418 aa22.81■■□□□ 1.24
CLN6-220ENST00000637450 GPR75-ASB3A0A0A6YYF3 556 aa22.8■■□□□ 1.24
CLN6-220ENST00000637450 CXCL11O14625 94 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms