RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ANKRD13AQ8IZ07 590 aa16.98■□□□□ 0.31
PNKP-228ENST00000637325 TEPSINQ96N21 525 aa16.98■□□□□ 0.31
PNKP-228ENST00000637325 USP40Q9NVE5 1235 aa16.98■□□□□ 0.31
PNKP-228ENST00000637325 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
PNKP-228ENST00000637325 FPGT-TNNI3KV9GXZ4 949 aa16.98■□□□□ 0.31
PNKP-228ENST00000637325 CAPN15O75808 1086 aa16.97■□□□□ 0.31
PNKP-228ENST00000637325 CCDC158Q5M9N0 1113 aa16.97■□□□□ 0.31
PNKP-228ENST00000637325 TTC39AQ5SRH9 613 aa16.97■□□□□ 0.31
PNKP-228ENST00000637325 SPRYD7Q5W111 196 aa16.97■□□□□ 0.31
PNKP-228ENST00000637325 CDC42EP5Q6NZY7 148 aa16.97■□□□□ 0.31
PNKP-228ENST00000637325 CDAN1Q8IWY9 1227 aa16.97■□□□□ 0.31
PNKP-228ENST00000637325 SPATA5Q8NB90 893 aa16.97■□□□□ 0.31
PNKP-228ENST00000637325 HOOK2Q96ED9 719 aa16.97■□□□□ 0.31
PNKP-228ENST00000637325 CLMNQ96JQ2 1002 aa16.97■□□□□ 0.31
PNKP-228ENST00000637325 HMG20BQ9P0W2 317 aa16.97■□□□□ 0.31
PNKP-228ENST00000637325 MYO5AQ9Y4I1 1855 aaKnown RBP16.97■□□□□ 0.31
PNKP-228ENST00000637325 ARID4AP29374 1257 aaPredicted RBP16.96■□□□□ 0.31
PNKP-228ENST00000637325 WNK4Q96J92 1243 aa16.96■□□□□ 0.31
PNKP-228ENST00000637325 DBNDD2Q9BQY9 259 aa16.96■□□□□ 0.31
PNKP-228ENST00000637325 TM4SF4P48230 202 aa16.95■□□□□ 0.3
PNKP-228ENST00000637325 MAP3K9P80192 1104 aa16.95■□□□□ 0.3
PNKP-228ENST00000637325 TCP10Q12799 353 aa16.95■□□□□ 0.3
PNKP-228ENST00000637325 ERC1Q8IUD2 1116 aa16.95■□□□□ 0.3
PNKP-228ENST00000637325 FAM151AQ8WW52 585 aa16.95■□□□□ 0.3
PNKP-228ENST00000637325 RAI14Q9P0K7 980 aa16.95■□□□□ 0.3
PNKP-228ENST00000637325 EXOC6BQ9Y2D4 811 aa16.95■□□□□ 0.3
PNKP-228ENST00000637325 CSADQ9Y600 493 aa16.95■□□□□ 0.3
PNKP-228ENST00000637325 MANSC4A6NHS7 340 aaPredicted RBP16.94■□□□□ 0.3
PNKP-228ENST00000637325 HMMRO75330 724 aa16.94■□□□□ 0.3
PNKP-228ENST00000637325 LDHCP07864 332 aa16.94■□□□□ 0.3
PNKP-228ENST00000637325 ZBTB48P10074 688 aaPredicted RBP16.94■□□□□ 0.3
PNKP-228ENST00000637325 MCAMP43121 646 aa16.94■□□□□ 0.3
PNKP-228ENST00000637325 GSTO1P78417 241 aa16.94■□□□□ 0.3
PNKP-228ENST00000637325 HSP90AB4PQ58FF6 505 aa16.94■□□□□ 0.3
PNKP-228ENST00000637325 DCAF15Q66K64 600 aa16.94■□□□□ 0.3
PNKP-228ENST00000637325 PI16Q6UXB8 463 aa16.94■□□□□ 0.3
PNKP-228ENST00000637325 TBC1D9Q6ZT07 1266 aa16.94■□□□□ 0.3
PNKP-228ENST00000637325 RPAP2Q8IXW5 612 aaPredicted RBP16.94■□□□□ 0.3
PNKP-228ENST00000637325 ELP3Q9H9T3 547 aa16.94■□□□□ 0.3
PNKP-228ENST00000637325 LRP2BPQ9P2M1 347 aa16.94■□□□□ 0.3
PNKP-228ENST00000637325 LAMB1P07942 1786 aa16.93■□□□□ 0.3
PNKP-228ENST00000637325 INHBEP58166 350 aa16.93■□□□□ 0.3
PNKP-228ENST00000637325 MECOMQ03112 1051 aa16.93■□□□□ 0.3
PNKP-228ENST00000637325 PDE3AQ14432 1141 aa16.93■□□□□ 0.3
PNKP-228ENST00000637325 FAM163AQ96GL9 167 aaPredicted RBP16.93■□□□□ 0.3
PNKP-228ENST00000637325 CCDC8Q9H0W5 538 aaPredicted RBP16.93■□□□□ 0.3
PNKP-228ENST00000637325 SNRKQ9NRH2 765 aa16.93■□□□□ 0.3
PNKP-228ENST00000637325 ZBTB40Q9NUA8 1239 aa16.93■□□□□ 0.3
PNKP-228ENST00000637325 DOCK2Q92608 1830 aa16.93■□□□□ 0.3
PNKP-228ENST00000637325 GAKO14976 1311 aa16.93■□□□□ 0.3
PNKP-228ENST00000637325 RPAP1Q9BWH6 1393 aaPredicted RBP16.92■□□□□ 0.3
PNKP-228ENST00000637325 BTDP43251 543 aa16.92■□□□□ 0.3
PNKP-228ENST00000637325 NFIAQ12857 509 aa16.92■□□□□ 0.3
PNKP-228ENST00000637325 OPTNQ96CV9 577 aa16.92■□□□□ 0.3
PNKP-228ENST00000637325 ZNF341Q9BYN7 854 aa16.92■□□□□ 0.3
PNKP-228ENST00000637325 MROH7-TTC4A0A0A0MT08 1334 aa16.92■□□□□ 0.3
PNKP-228ENST00000637325 APBB1O00213 710 aa16.91■□□□□ 0.3
PNKP-228ENST00000637325 TBC1D8O95759 1140 aa16.91■□□□□ 0.3
PNKP-228ENST00000637325 VGLL4Q14135 290 aa16.91■□□□□ 0.3
PNKP-228ENST00000637325 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.91■□□□□ 0.3
PNKP-228ENST00000637325 MIGA2Q7L4E1 593 aa16.91■□□□□ 0.3
PNKP-228ENST00000637325 ZSCAN29Q8IWY8 852 aaPredicted RBP16.91■□□□□ 0.3
PNKP-228ENST00000637325 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.91■□□□□ 0.3
PNKP-228ENST00000637325 EAF2Q96CJ1 260 aaPredicted RBP16.91■□□□□ 0.3
PNKP-228ENST00000637325 WRNIP1Q96S55 665 aa16.91■□□□□ 0.3
PNKP-228ENST00000637325 NOL10Q9BSC4 688 aaKnown RBP16.91■□□□□ 0.3
PNKP-228ENST00000637325 FAM198AQ9UFP1 575 aa16.91■□□□□ 0.3
PNKP-228ENST00000637325 DBNLQ9UJU6 430 aaKnown RBP16.91■□□□□ 0.3
PNKP-228ENST00000637325 ALDH1A1P00352 501 aa16.9■□□□□ 0.3
PNKP-228ENST00000637325 RGS3P49796 1198 aa16.9■□□□□ 0.3
PNKP-228ENST00000637325 C20orf194Q5TEA3 1177 aa16.9■□□□□ 0.3
PNKP-228ENST00000637325 OTUD7BQ6GQQ9 843 aa16.9■□□□□ 0.3
PNKP-228ENST00000637325 AACSQ86V21 672 aa16.9■□□□□ 0.3
PNKP-228ENST00000637325 NSUN4Q96CB9 384 aaKnown RBP16.9■□□□□ 0.3
PNKP-228ENST00000637325 IDI2Q9BXS1 227 aa16.9■□□□□ 0.3
PNKP-228ENST00000637325 MAST2Q6P0Q8 1798 aa16.89■□□□□ 0.3
PNKP-228ENST00000637325 GPR75-ASB3A0A0A6YYF3 556 aa16.89■□□□□ 0.29
PNKP-228ENST00000637325 ENTPD3O75355 529 aa16.89■□□□□ 0.29
PNKP-228ENST00000637325 GJA5P36382 358 aa16.89■□□□□ 0.29
PNKP-228ENST00000637325 PICALMQ13492 652 aa16.89■□□□□ 0.29
PNKP-228ENST00000637325 DGKZQ13574 1117 aa16.89■□□□□ 0.29
PNKP-228ENST00000637325 IFNL1Q8IU54 200 aa16.89■□□□□ 0.29
PNKP-228ENST00000637325 ZNF512BQ96KM6 892 aaPredicted RBP16.89■□□□□ 0.29
PNKP-228ENST00000637325 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
PNKP-228ENST00000637325 BCL11AQ9H165 835 aa16.89■□□□□ 0.29
PNKP-228ENST00000637325 IL1RAPL2Q9NP60 686 aa16.89■□□□□ 0.29
PNKP-228ENST00000637325 TLR7Q9NYK1 1049 aaKnown RBP16.89■□□□□ 0.29
PNKP-228ENST00000637325 ZAP70P43403 619 aa16.88■□□□□ 0.29
PNKP-228ENST00000637325 NAA16Q6N069 864 aaPredicted RBP16.88■□□□□ 0.29
PNKP-228ENST00000637325 ZFPM1Q8IX07 1006 aa16.88■□□□□ 0.29
PNKP-228ENST00000637325 CLASRPQ8N2M8 674 aaKnown RBP16.88■□□□□ 0.29
PNKP-228ENST00000637325 RHPN1Q8TCX5 695 aa16.88■□□□□ 0.29
PNKP-228ENST00000637325 ZKSCAN4Q969J2 545 aaPredicted RBP16.88■□□□□ 0.29
PNKP-228ENST00000637325 KIF1BPQ96EK5 621 aa16.88■□□□□ 0.29
PNKP-228ENST00000637325 OTUD5Q96G74 571 aa16.88■□□□□ 0.29
PNKP-228ENST00000637325 ABHD8Q96I13 439 aa16.88■□□□□ 0.29
PNKP-228ENST00000637325 CDK5RAP2Q96SN8 1893 aa16.88■□□□□ 0.29
PNKP-228ENST00000637325 RAB11FIP3O75154 756 aa16.87■□□□□ 0.29
PNKP-228ENST00000637325 MAP4K4O95819 1239 aaPredicted RBP16.87■□□□□ 0.29
PNKP-228ENST00000637325 CYP2E1P05181 493 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms