RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 TACC3Q9Y6A5 838 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 SALL1Q9NSC2 1324 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 DYNLL1P63167 89 aaKnown RBP9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 MCMDC2Q4G0Z9 681 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 LCORLQ8N3X6 602 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 FAM205AQ6ZU69 1335 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 SEMA3EO15041 775 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 DACT2Q5SW24 774 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 TTLL5Q6EMB2 1281 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 MAP4K1Q92918 833 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 LRP2BPQ9P2M1 347 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 RAD50Q92878 1312 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 HSPD1P10809 573 aaKnown RBP9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 NECTIN1Q15223 517 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 MFSD14BQ5SR56 506 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 NBPF3Q9H094 633 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 CCDC171Q6TFL3 1326 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 SHTN1A0MZ66 631 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 GPAA1O43292 621 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 PPIP5K2O43314 1243 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 TTF1Q15361 905 aaPredicted RBP9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 UBE3CQ15386 1083 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 RTKN2Q8IZC4 609 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 APPBP2Q92624 585 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 EPB41L4AQ9HCS5 686 aaPredicted RBP9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 GNL3LQ9NVN8 582 aaKnown RBP9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 HIP1O00291 1037 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 PRPF40AO75400 957 aaKnown RBP9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 ADCK5Q3MIX3 580 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 TMX3Q96JJ7 454 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 STRBPQ96SI9 672 aaKnown RBP9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 ARMT1Q9H993 441 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 CCDC88AQ3V6T2 1871 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 BAG4O95429 457 aaKnown RBP9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 MRE11P49959 708 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 ANAPC15P60006 121 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 ZGPATQ8N5A5 531 aaKnown RBP9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 RAI14Q9P0K7 980 aa9.75□□□□□ -0.85
CACNA1A-232ENST00000636966 F8W031 263 aaPredicted RBP9.74□□□□□ -0.85
CACNA1A-232ENST00000636966 HELLSQ9NRZ9 838 aa9.74□□□□□ -0.85
CACNA1A-232ENST00000636966 RAD17O75943 681 aa9.74□□□□□ -0.85
CACNA1A-232ENST00000636966 HSPA4P34932 840 aa9.74□□□□□ -0.85
CACNA1A-232ENST00000636966 RNF20Q5VTR2 975 aa9.74□□□□□ -0.85
CACNA1A-232ENST00000636966 INCENPQ9NQS7 918 aa9.74□□□□□ -0.85
CACNA1A-232ENST00000636966 SIPA1L1O43166 1804 aa9.74□□□□□ -0.85
CACNA1A-232ENST00000636966 MBD4O95243 580 aa9.74□□□□□ -0.85
CACNA1A-232ENST00000636966 CPA1P15085 419 aa9.74□□□□□ -0.85
CACNA1A-232ENST00000636966 CC2D2BQ6DHV5 1058 aa9.74□□□□□ -0.85
CACNA1A-232ENST00000636966 PODNQ7Z5L7 613 aa9.74□□□□□ -0.85
CACNA1A-232ENST00000636966 SDR42E1Q8WUS8 393 aa9.74□□□□□ -0.85
CACNA1A-232ENST00000636966 MYH2Q9UKX2 1941 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 CENPFP49454 3210 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 CYP21A2P08686 494 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 CYP7A1P22680 504 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 IARSP41252 1262 aaKnown RBP9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 SCNN1DP51172 638 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 MAP3K12Q12852 859 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 STOX1Q6ZVD7 989 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 TAOK3Q9H2K8 898 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 AATFQ9NY61 560 aaKnown RBP eCLIP9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 NAP1L2Q9ULW6 460 aaPredicted RBP9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 SMC3Q9UQE7 1217 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 RBM8AQ9Y5S9 174 aaKnown RBP9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 GSG1L2A8MUP6 293 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 EGFRP00533 1210 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 CAVIN1Q6NZI2 390 aaKnown RBP9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 JAKMIP1Q96N16 626 aaKnown RBP9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 PSMD14O00487 310 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 FGAP02671 866 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 CASTP20810 708 aaKnown RBP9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 WDR66Q8TBY9 1149 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 EYA3Q99504 573 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 SNX14Q9Y5W7 946 aa9.73□□□□□ -0.85
CACNA1A-232ENST00000636966 LARGE2Q8N3Y3 721 aa9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 KCNB2Q92953 911 aa9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 GMLQ99445 158 aa9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 LARP6Q9BRS8 491 aaKnown RBP9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 CYP46A1Q9Y6A2 500 aa9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 LDHBP07195 334 aaKnown RBP9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 ZFYP08048 801 aaPredicted RBP9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 SLURP2P0DP57 97 aa9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 CXCL9Q07325 125 aa9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 STRIP1Q5VSL9 837 aa9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 NAA16Q6N069 864 aaPredicted RBP9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 KIAA0825Q8IV33 1275 aa9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 HOMEZQ8IX15 550 aa9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 MKRN1Q9UHC7 482 aaKnown RBP9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 RHBDL3P58872 404 aa9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 SH3RF3Q8TEJ3 882 aaPredicted RBP9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.72□□□□□ -0.85
CACNA1A-232ENST00000636966 BAZ2AQ9UIF9 1905 aaKnown RBP9.71□□□□□ -0.85
CACNA1A-232ENST00000636966 CYP2D7A0A087X1C5 515 aa9.71□□□□□ -0.85
CACNA1A-232ENST00000636966 SLC27A2O14975 620 aa9.71□□□□□ -0.85
CACNA1A-232ENST00000636966 CREB3L3Q68CJ9 461 aa9.71□□□□□ -0.85
CACNA1A-232ENST00000636966 GRPEL1Q9HAV7 217 aa9.71□□□□□ -0.85
CACNA1A-232ENST00000636966 ZNF541Q9H0D2 1346 aa9.71□□□□□ -0.85
CACNA1A-232ENST00000636966 USP17L3A6NCW0 530 aa9.71□□□□□ -0.86
CACNA1A-232ENST00000636966 USP17L4A6NCW7 530 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms