RNA–Protein interactions for RNA: ENST00000636903.1

SMARCA2-254, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-254ENST00000636903 CWC22Q9HCG8 908 aaKnown RBP16.17■□□□□ 0.18
SMARCA2-254ENST00000636903 PODXL2Q9NZ53 605 aa16.17■□□□□ 0.18
SMARCA2-254ENST00000636903 PRC1O43663 620 aa16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 PRDM1O75626 825 aa16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 LDHBP07195 334 aaKnown RBP16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 RXRAP19793 462 aa16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 MFSD14BQ5SR56 506 aa16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 DDX11Q96FC9 970 aa16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 RGPD3A6NKT7 1758 aaPredicted RBP16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 RGPD4Q7Z3J3 1758 aa16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 SEMA3EO15041 775 aa16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 HMGB2P26583 209 aaKnown RBP16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 ALDH1B1P30837 517 aa16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 MB21D2Q8IYB1 491 aaPredicted RBP16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 INTS4Q96HW7 963 aaKnown RBP16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 PPP1R1BQ9UD71 204 aaPredicted RBP16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 SMC3Q9UQE7 1217 aa16.16■□□□□ 0.18
SMARCA2-254ENST00000636903 CYP2D6P10635 497 aa16.15■□□□□ 0.18
SMARCA2-254ENST00000636903 SCRN1Q12765 414 aa16.15■□□□□ 0.18
SMARCA2-254ENST00000636903 TPRNQ4KMQ1 711 aa16.15■□□□□ 0.18
SMARCA2-254ENST00000636903 RALYLQ86SE5 291 aaKnown RBP16.15■□□□□ 0.18
SMARCA2-254ENST00000636903 DUOX1Q9NRD9 1551 aa16.15■□□□□ 0.18
SMARCA2-254ENST00000636903 C21orf2O43822 256 aa16.14■□□□□ 0.18
SMARCA2-254ENST00000636903 FAM43AQ8N2R8 423 aa16.14■□□□□ 0.18
SMARCA2-254ENST00000636903 NCOA7Q8NI08 942 aa16.14■□□□□ 0.18
SMARCA2-254ENST00000636903 KDM4AO75164 1064 aa16.14■□□□□ 0.17
SMARCA2-254ENST00000636903 MYL10Q9BUA6 226 aa16.14■□□□□ 0.17
SMARCA2-254ENST00000636903 ZC3H12CQ9C0D7 883 aaKnown RBP16.14■□□□□ 0.17
SMARCA2-254ENST00000636903 IL1R1P14778 569 aa16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 SYT1P21579 422 aa16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 SH3RF3Q8TEJ3 882 aaPredicted RBP16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 PSDA5PKW4 1024 aaPredicted RBP16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 USP17L12C9JPN9 530 aa16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 USP17L21D6R901 530 aa16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 BAG4O95429 457 aaKnown RBP16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 NUCB2P80303 420 aa16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 R3HDM1Q15032 1099 aaKnown RBP16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 CCDC144CPQ8IYA2 1237 aa16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 KLHL34Q8N239 644 aa16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 CERS5Q8N5B7 392 aa16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 WDR66Q8TBY9 1149 aa16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 GZF1Q9H116 711 aaPredicted RBP16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 SH2B1Q9NRF2 756 aaPredicted RBP16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 ZSWIM5Q9P217 1185 aa16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 LTBP1Q14766 1721 aa16.13■□□□□ 0.17
SMARCA2-254ENST00000636903 MCTP1Q6DN14 999 aa16.12■□□□□ 0.17
SMARCA2-254ENST00000636903 ZSCAN31Q96LW9 406 aaPredicted RBP16.12■□□□□ 0.17
SMARCA2-254ENST00000636903 GDPD2Q9HCC8 539 aa16.12■□□□□ 0.17
SMARCA2-254ENST00000636903 HMGB1P09429 215 aaKnown RBP16.12■□□□□ 0.17
SMARCA2-254ENST00000636903 USP17L8P0C7I0 530 aa16.12■□□□□ 0.17
SMARCA2-254ENST00000636903 MCM5P33992 734 aa16.12■□□□□ 0.17
SMARCA2-254ENST00000636903 SCNN1DP51172 638 aa16.12■□□□□ 0.17
SMARCA2-254ENST00000636903 PPARAQ07869 468 aa16.12■□□□□ 0.17
SMARCA2-254ENST00000636903 ANKRD1Q15327 319 aa16.12■□□□□ 0.17
SMARCA2-254ENST00000636903 NACAP1Q9BZK3 213 aa16.12■□□□□ 0.17
SMARCA2-254ENST00000636903 LRRC37AA6NMS7 1700 aa16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 BRD1O95696 1058 aa16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 PDIA3P30101 505 aaKnown RBP16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 TRDNQ13061 729 aa16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 C15orf52Q6ZUT6 534 aaKnown RBP16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 GTF3C6Q969F1 213 aa16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 DCP1AQ9NPI6 582 aaPredicted RBP16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 PCDHAC2Q9Y5I4 1007 aa16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 KLF18A0A0U1RQI7 1052 aa16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 VPS37CA5D8V6 355 aaPredicted RBP16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 DPEP1P16444 411 aa16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 ALX1Q15699 326 aa16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 AOC3Q16853 763 aa16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 AKNAD1Q5T1N1 836 aa16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 CTR9Q6PD62 1173 aa16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 FERMT3Q86UX7 667 aa16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 CHMP4CQ96CF2 233 aa16.11■□□□□ 0.17
SMARCA2-254ENST00000636903 G3V3G9 751 aa16.1■□□□□ 0.17
SMARCA2-254ENST00000636903 CTDNEP1O95476 244 aa16.1■□□□□ 0.17
SMARCA2-254ENST00000636903 DCAF8Q5TAQ9 597 aa16.1■□□□□ 0.17
SMARCA2-254ENST00000636903 FAM173BQ6P4H8 233 aa16.1■□□□□ 0.17
SMARCA2-254ENST00000636903 MFSD6Q6ZSS7 791 aa16.1■□□□□ 0.17
SMARCA2-254ENST00000636903 TGFBRAP1Q8WUH2 860 aa16.1■□□□□ 0.17
SMARCA2-254ENST00000636903 ALDH8A1Q9H2A2 487 aaPredicted RBP16.1■□□□□ 0.17
SMARCA2-254ENST00000636903 SAP30BPQ9UHR5 308 aaKnown RBP16.1■□□□□ 0.17
SMARCA2-254ENST00000636903 GNAT2P19087 354 aa16.1■□□□□ 0.17
SMARCA2-254ENST00000636903 GBP4Q96PP9 640 aa16.1■□□□□ 0.17
SMARCA2-254ENST00000636903 AGXT2Q9BYV1 514 aa16.1■□□□□ 0.17
SMARCA2-254ENST00000636903 PDS5AQ29RF7 1337 aaKnown RBP16.1■□□□□ 0.17
SMARCA2-254ENST00000636903 MYH2Q9UKX2 1941 aa16.09■□□□□ 0.17
SMARCA2-254ENST00000636903 STX6O43752 255 aa16.09■□□□□ 0.17
SMARCA2-254ENST00000636903 MAPKAPK5Q8IW41 473 aa16.09■□□□□ 0.17
SMARCA2-254ENST00000636903 TMX4Q9H1E5 349 aaPredicted RBP16.09■□□□□ 0.17
SMARCA2-254ENST00000636903 CCDC88AQ3V6T2 1871 aa16.09■□□□□ 0.17
SMARCA2-254ENST00000636903 SPTY2D1Q68D10 685 aaPredicted RBP16.09■□□□□ 0.17
SMARCA2-254ENST00000636903 STYK1Q6J9G0 422 aa16.09■□□□□ 0.17
SMARCA2-254ENST00000636903 C7orf43Q8WVR3 580 aa16.09■□□□□ 0.17
SMARCA2-254ENST00000636903 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
SMARCA2-254ENST00000636903 MCM9Q9NXL9 1143 aa16.09■□□□□ 0.17
SMARCA2-254ENST00000636903 GOLGA8BA8MQT2 603 aa16.08■□□□□ 0.17
SMARCA2-254ENST00000636903 KCNA3P22001 575 aa16.08■□□□□ 0.17
SMARCA2-254ENST00000636903 BTDP43251 543 aa16.08■□□□□ 0.17
SMARCA2-254ENST00000636903 CDC37L1Q7L3B6 337 aa16.08■□□□□ 0.17
SMARCA2-254ENST00000636903 TMC4Q7Z404 712 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms