RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 LRRFIP1Q32MZ4 808 aaKnown RBP16.22■□□□□ 0.19
CACNA1A-228ENST00000636610 KIF18AQ8NI77 898 aa16.22■□□□□ 0.19
CACNA1A-228ENST00000636610 MST1RQ04912 1400 aa16.22■□□□□ 0.19
CACNA1A-228ENST00000636610 ERVV-2B6SEH9 535 aa16.22■□□□□ 0.19
CACNA1A-228ENST00000636610 ZBTB43O43298 467 aa16.22■□□□□ 0.19
CACNA1A-228ENST00000636610 RANBP6O60518 1105 aaKnown RBP16.22■□□□□ 0.19
CACNA1A-228ENST00000636610 MBD4O95243 580 aa16.22■□□□□ 0.19
CACNA1A-228ENST00000636610 PDE6AP16499 860 aa16.22■□□□□ 0.19
CACNA1A-228ENST00000636610 KMT5BQ4FZB7 885 aa16.22■□□□□ 0.19
CACNA1A-228ENST00000636610 ZBTB38Q8NAP3 1195 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-228ENST00000636610 ZBTB1Q9Y2K1 713 aa16.22■□□□□ 0.19
CACNA1A-228ENST00000636610 RIPOR2Q9Y4F9 1068 aa16.22■□□□□ 0.19
CACNA1A-228ENST00000636610 ANKRD18BA2A2Z9 1011 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 COBLO75128 1261 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 ZFYP08048 801 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 ADD2P35612 726 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 UBASH3AP57075 661 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 RBM6P78332 1123 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 NCAPHQ15003 741 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 NYAP1Q6ZVC0 841 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 BRINP3Q76B58 766 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 FANCLQ9NW38 375 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 A0A1W2PQ27 194 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 A0A1W2PQ64 194 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 A0A1W2PQD8 194 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 WTIPA6NIX2 430 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 NLRP12P59046 1061 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 PPP1R13BQ96KQ4 1090 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 UTP14AQ9BVJ6 771 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 EPC1Q9H2F5 836 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 SEC31BQ9NQW1 1179 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 ZSWIM5Q9P217 1185 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 DNAI1Q9UI46 699 aa16.21■□□□□ 0.19
CACNA1A-228ENST00000636610 YEATS4O95619 227 aa16.21■□□□□ 0.18
CACNA1A-228ENST00000636610 NR5A1Q13285 461 aa16.21■□□□□ 0.18
CACNA1A-228ENST00000636610 TRIM29Q14134 588 aa16.21■□□□□ 0.18
CACNA1A-228ENST00000636610 SLC39A14Q15043 492 aa16.21■□□□□ 0.18
CACNA1A-228ENST00000636610 SLC4A8Q2Y0W8 1093 aa16.21■□□□□ 0.18
CACNA1A-228ENST00000636610 FBXO38Q6PIJ6 1188 aa16.21■□□□□ 0.18
CACNA1A-228ENST00000636610 NLRP10Q86W26 655 aa16.21■□□□□ 0.18
CACNA1A-228ENST00000636610 FOXP4Q8IVH2 680 aaPredicted RBP16.21■□□□□ 0.18
CACNA1A-228ENST00000636610 NAPBQ9H115 298 aa16.21■□□□□ 0.18
CACNA1A-228ENST00000636610 TACC3Q9Y6A5 838 aa16.21■□□□□ 0.18
CACNA1A-228ENST00000636610 PCCAP05165 728 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-228ENST00000636610 BRAPQ7Z569 592 aa16.2■□□□□ 0.18
CACNA1A-228ENST00000636610 CNNM3Q8NE01 707 aa16.2■□□□□ 0.18
CACNA1A-228ENST00000636610 CASP1P29466 404 aa16.2■□□□□ 0.18
CACNA1A-228ENST00000636610 PDE4BQ07343 736 aa16.2■□□□□ 0.18
CACNA1A-228ENST00000636610 ZNF771Q7L3S4 317 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-228ENST00000636610 PCDHA5Q9Y5H7 936 aa16.2■□□□□ 0.18
CACNA1A-228ENST00000636610 SLC12A7Q9Y666 1083 aa16.2■□□□□ 0.18
CACNA1A-228ENST00000636610 PHRF1Q9P1Y6 1649 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 GOLGB1Q14789 3259 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 MINDY4BA8MYZ0 360 aa16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 SH2B2O14492 632 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 CMA1P23946 247 aa16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 DMTNQ08495 405 aa16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 ATL3Q6DD88 541 aa16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 TRPM3Q9HCF6 1732 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 TNS3Q68CZ2 1445 aa16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 CTSWP56202 376 aa16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 TPM4P67936 248 aa16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 USP49Q70CQ1 688 aa16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 CREBRFQ8IUR6 639 aa16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 STARD3NLO95772 234 aa16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 ATG3Q9NT62 314 aa16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 ABCF2Q9UG63 623 aa16.19■□□□□ 0.18
CACNA1A-228ENST00000636610 ZMYM6O95789 1325 aa16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 UBN2Q6ZU65 1347 aa16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 TDO2P48775 406 aa16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 BCAMP50895 628 aa16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 EVCP57679 992 aa16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 KLHL10Q6JEL2 608 aa16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 CPLX2Q6PUV4 134 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 METTL16Q86W50 562 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 SLC4A9Q96Q91 983 aa16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 EPB41L4AQ9HCS5 686 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 BAZ2BQ9UIF8 2168 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 NEMFO60524 1076 aa16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 PRDM1O75626 825 aa16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 PDE8BO95263 885 aa16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 CDK11BP21127 795 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 HSD3B7Q9H2F3 369 aa16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 KCNH3Q9ULD8 1083 aa16.18■□□□□ 0.18
CACNA1A-228ENST00000636610 FAM205CA6NFA0 338 aa16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 PRR29P0C7W0 189 aa16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 ADKP55263 362 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 GSDMDP57764 484 aa16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 GIGYF2Q6Y7W6 1299 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 OXER1Q8TDS5 423 aa16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 SDR42E1Q8WUS8 393 aa16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 STAMQ92783 540 aa16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 POLR2DO15514 142 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 URI1O94763 535 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 CSF1RP07333 972 aa16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 RASGRF1Q13972 1273 aa16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 IGDCC4Q8TDY8 1250 aa16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 STRBPQ96SI9 672 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-228ENST00000636610 BMP6P22004 513 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms