RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 SPATA5Q8NB90 893 aa16.12■□□□□ 0.17
GABRB3-219ENST00000636466 PYM1Q9BRP8 204 aaKnown RBP16.12■□□□□ 0.17
GABRB3-219ENST00000636466 DBNLQ9UJU6 430 aaKnown RBP16.12■□□□□ 0.17
GABRB3-219ENST00000636466 KCNH3Q9ULD8 1083 aa16.12■□□□□ 0.17
GABRB3-219ENST00000636466 DENND2AQ9ULE3 1009 aa16.12■□□□□ 0.17
GABRB3-219ENST00000636466 GUCA1BQ9UMX6 200 aa16.12■□□□□ 0.17
GABRB3-219ENST00000636466 USP6P35125 1406 aa16.12■□□□□ 0.17
GABRB3-219ENST00000636466 UBXN1Q04323 297 aa16.12■□□□□ 0.17
GABRB3-219ENST00000636466 ZYXQ15942 572 aaKnown RBP16.12■□□□□ 0.17
GABRB3-219ENST00000636466 PARP10Q53GL7 1025 aa16.12■□□□□ 0.17
GABRB3-219ENST00000636466 FCHSD1Q86WN1 690 aa16.12■□□□□ 0.17
GABRB3-219ENST00000636466 ALS2CR12Q96Q35 445 aa16.12■□□□□ 0.17
GABRB3-219ENST00000636466 PAXBP1Q9Y5B6 917 aa16.12■□□□□ 0.17
GABRB3-219ENST00000636466 POTEJP0CG39 1038 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 PPP4R3AQ6IN85 833 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 PI16Q6UXB8 463 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 MAPKAPK5Q8IW41 473 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 ANKRD2Q9GZV1 360 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 FAM107BQ9H098 131 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 VPS16Q9H269 839 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 RTL9Q8NET4 1388 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 FAM135BQ49AJ0 1406 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 ADORA1P30542 326 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 SDR42E1Q8WUS8 393 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 ZBTB1Q9Y2K1 713 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 EFCAB6Q5THR3 1501 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 TSPOAP1O95153 1857 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 SPDYE3A6NKU9 549 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 MYL5Q02045 173 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 SPAG1Q07617 926 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 CBX8Q9HC52 389 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 AOX1Q06278 1338 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 SETD1BQ9UPS6 1966 aaKnown RBP16.11■□□□□ 0.17
GABRB3-219ENST00000636466 BCAMP50895 628 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 MAP9Q49MG5 647 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 TMEM87BQ96K49 555 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 CAPZA3Q96KX2 299 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 GREM2Q9H772 168 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 VPS54Q9P1Q0 977 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 AATKQ6ZMQ8 1374 aa16.11■□□□□ 0.17
GABRB3-219ENST00000636466 ERMNQ8TAM6 284 aa16.1■□□□□ 0.17
GABRB3-219ENST00000636466 DYDC1Q8WWB3 177 aa16.1■□□□□ 0.17
GABRB3-219ENST00000636466 BICD1Q96G01 975 aa16.1■□□□□ 0.17
GABRB3-219ENST00000636466 IBTKQ9P2D0 1353 aaPredicted RBP16.1■□□□□ 0.17
GABRB3-219ENST00000636466 GOLGA6L9A6NEM1 432 aa16.1■□□□□ 0.17
GABRB3-219ENST00000636466 ERVV-2B6SEH9 535 aa16.1■□□□□ 0.17
GABRB3-219ENST00000636466 TCP10Q12799 353 aa16.1■□□□□ 0.17
GABRB3-219ENST00000636466 GAS2L3Q86XJ1 694 aa16.1■□□□□ 0.17
GABRB3-219ENST00000636466 ZNF202O95125 648 aa16.1■□□□□ 0.17
GABRB3-219ENST00000636466 AXIN2Q9Y2T1 843 aa16.1■□□□□ 0.17
GABRB3-219ENST00000636466 USP17L12C9JPN9 530 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 USP17L21D6R901 530 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 RILPL1Q5EBL4 403 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 EHMT1Q9H9B1 1298 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 PLXNC1O60486 1568 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 ERBB3P21860 1342 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 CTAGE1Q96RT6 745 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 PLCD4Q9BRC7 762 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 FAM170AA1A519 330 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 HSPD1P10809 573 aaKnown RBP16.09■□□□□ 0.17
GABRB3-219ENST00000636466 GNA11P29992 359 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 CETN2P41208 172 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 ANTXR1Q9H6X2 564 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.09■□□□□ 0.17
GABRB3-219ENST00000636466 DEXIO95424 95 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 CYLC1P35663 651 aaPredicted RBP16.09■□□□□ 0.17
GABRB3-219ENST00000636466 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
GABRB3-219ENST00000636466 TRMT44Q8IYL2 757 aaKnown RBP16.09■□□□□ 0.17
GABRB3-219ENST00000636466 RGS22Q8NE09 1264 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 PARP3Q9Y6F1 533 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 KDM5DQ9BY66 1539 aa16.09■□□□□ 0.17
GABRB3-219ENST00000636466 FGAP02671 866 aa16.08■□□□□ 0.17
GABRB3-219ENST00000636466 PARP1P09874 1014 aaKnown RBP16.08■□□□□ 0.17
GABRB3-219ENST00000636466 CCDC175P0C221 793 aa16.08■□□□□ 0.17
GABRB3-219ENST00000636466 HMGB2P26583 209 aaKnown RBP16.08■□□□□ 0.17
GABRB3-219ENST00000636466 LMAN1P49257 510 aa16.08■□□□□ 0.17
GABRB3-219ENST00000636466 RAD51AP2Q09MP3 1159 aa16.08■□□□□ 0.17
GABRB3-219ENST00000636466 CCDC42Q96M95 316 aa16.08■□□□□ 0.17
GABRB3-219ENST00000636466 USP28Q96RU2 1077 aa16.08■□□□□ 0.17
GABRB3-219ENST00000636466 ELP1O95163 1332 aa16.08■□□□□ 0.16
GABRB3-219ENST00000636466 PHACTR2O75167 634 aa16.08■□□□□ 0.16
GABRB3-219ENST00000636466 PLCG2P16885 1265 aa16.08■□□□□ 0.16
GABRB3-219ENST00000636466 TXKP42681 527 aa16.08■□□□□ 0.16
GABRB3-219ENST00000636466 PLEKHG1Q9ULL1 1385 aa16.08■□□□□ 0.16
GABRB3-219ENST00000636466 MYOM2P54296 1465 aa16.08■□□□□ 0.16
GABRB3-219ENST00000636466 DCAF8L1A6NGE4 600 aa16.07■□□□□ 0.16
GABRB3-219ENST00000636466 PHKA1P46020 1223 aa16.07■□□□□ 0.16
GABRB3-219ENST00000636466 CTSWP56202 376 aa16.07■□□□□ 0.16
GABRB3-219ENST00000636466 ZNF569Q5MCW4 686 aa16.07■□□□□ 0.16
GABRB3-219ENST00000636466 TCHPQ9BT92 498 aa16.07■□□□□ 0.16
GABRB3-219ENST00000636466 RPS8P62241 208 aaKnown RBP16.07■□□□□ 0.16
GABRB3-219ENST00000636466 CCDC174Q6PII3 467 aa16.07■□□□□ 0.16
GABRB3-219ENST00000636466 TGFBRAP1Q8WUH2 860 aa16.07■□□□□ 0.16
GABRB3-219ENST00000636466 CLSTN2Q9H4D0 955 aa16.07■□□□□ 0.16
GABRB3-219ENST00000636466 KDRP35968 1356 aa16.07■□□□□ 0.16
GABRB3-219ENST00000636466 TFAP4Q01664 338 aa16.07■□□□□ 0.16
GABRB3-219ENST00000636466 MAATS1Q7Z4T9 603 aa16.07■□□□□ 0.16
GABRB3-219ENST00000636466 TTC6Q86TZ1 520 aa16.07■□□□□ 0.16
GABRB3-219ENST00000636466 ZNF589Q86UQ0 364 aaPredicted RBP16.07■□□□□ 0.16
GABRB3-219ENST00000636466 MTMR6Q9Y217 621 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms