RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 CCDC82Q8N4S0 544 aa17.5■□□□□ 0.39
CLN5-209ENST00000636405 LY9Q9HBG7 655 aa17.5■□□□□ 0.39
CLN5-209ENST00000636405 DDX19AQ9NUU7 478 aaKnown RBP17.5■□□□□ 0.39
CLN5-209ENST00000636405 ZKSCAN5Q9Y2L8 839 aa17.5■□□□□ 0.39
CLN5-209ENST00000636405 MINDY4BA8MYZ0 360 aa17.49■□□□□ 0.39
CLN5-209ENST00000636405 IFIT3O14879 490 aaKnown RBP17.49■□□□□ 0.39
CLN5-209ENST00000636405 DHX16O60231 1041 aaKnown RBP17.49■□□□□ 0.39
CLN5-209ENST00000636405 HS1BP3Q53T59 392 aa17.49■□□□□ 0.39
CLN5-209ENST00000636405 CMTR1Q8N1G2 835 aaKnown RBP17.49■□□□□ 0.39
CLN5-209ENST00000636405 FBXW7Q969H0 707 aa17.49■□□□□ 0.39
CLN5-209ENST00000636405 TFCP2L1Q9NZI6 479 aa17.49■□□□□ 0.39
CLN5-209ENST00000636405 USP21Q9UK80 565 aa17.49■□□□□ 0.39
CLN5-209ENST00000636405 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.49■□□□□ 0.39
CLN5-209ENST00000636405 DYNLL1P63167 89 aaKnown RBP17.49■□□□□ 0.39
CLN5-209ENST00000636405 VPS37DQ86XT2 251 aa17.49■□□□□ 0.39
CLN5-209ENST00000636405 ZNF396Q96N95 335 aaPredicted RBP17.49■□□□□ 0.39
CLN5-209ENST00000636405 DNAJC25Q9H1X3 360 aa17.49■□□□□ 0.39
CLN5-209ENST00000636405 TTC12Q9H892 705 aaPredicted RBP17.49■□□□□ 0.39
CLN5-209ENST00000636405 CYP2D7A0A087X1C5 515 aa17.48■□□□□ 0.39
CLN5-209ENST00000636405 SF3B3Q15393 1217 aaKnown RBP17.48■□□□□ 0.39
CLN5-209ENST00000636405 NBPF5PQ86XG9 351 aaPredicted RBP17.48■□□□□ 0.39
CLN5-209ENST00000636405 SPC24Q8NBT2 197 aa17.48■□□□□ 0.39
CLN5-209ENST00000636405 PCDHA7Q9UN72 937 aa17.48■□□□□ 0.39
CLN5-209ENST00000636405 EP400Q96L91 3159 aa17.48■□□□□ 0.39
CLN5-209ENST00000636405 AKNAD1Q5T1N1 836 aa17.48■□□□□ 0.39
CLN5-209ENST00000636405 MFSD6Q6ZSS7 791 aa17.48■□□□□ 0.39
CLN5-209ENST00000636405 FAM84BQ96KN1 310 aaPredicted RBP17.48■□□□□ 0.39
CLN5-209ENST00000636405 SETDB2Q96T68 719 aa17.48■□□□□ 0.39
CLN5-209ENST00000636405 ALG1Q9BT22 464 aa17.48■□□□□ 0.39
CLN5-209ENST00000636405 FAM217BQ9NTX9 383 aaPredicted RBP17.48■□□□□ 0.39
CLN5-209ENST00000636405 BSDC1Q9NW68 430 aaPredicted RBP17.48■□□□□ 0.39
CLN5-209ENST00000636405 CCNL1Q9UK58 526 aaPredicted RBP17.48■□□□□ 0.39
CLN5-209ENST00000636405 RTL9Q8NET4 1388 aa17.47■□□□□ 0.39
CLN5-209ENST00000636405 ZMYM6O95789 1325 aa17.47■□□□□ 0.39
CLN5-209ENST00000636405 COL1A1P02452 1464 aaPredicted RBP17.47■□□□□ 0.39
CLN5-209ENST00000636405 A0A1B0GVL5 298 aa17.47■□□□□ 0.39
CLN5-209ENST00000636405 ZBTB43O43298 467 aa17.47■□□□□ 0.39
CLN5-209ENST00000636405 RANBP6O60518 1105 aaKnown RBP17.47■□□□□ 0.39
CLN5-209ENST00000636405 SNW1Q13573 536 aaKnown RBP17.47■□□□□ 0.39
CLN5-209ENST00000636405 ALX1Q15699 326 aa17.47■□□□□ 0.39
CLN5-209ENST00000636405 FSIP1Q8NA03 581 aa17.47■□□□□ 0.39
CLN5-209ENST00000636405 CBX8Q9HC52 389 aa17.47■□□□□ 0.39
CLN5-209ENST00000636405 GOLGA8AA7E2F4 631 aa17.47■□□□□ 0.39
CLN5-209ENST00000636405 EVX2Q03828 476 aa17.47■□□□□ 0.39
CLN5-209ENST00000636405 ZPR1O75312 459 aa17.46■□□□□ 0.39
CLN5-209ENST00000636405 SASS6Q6UVJ0 657 aa17.46■□□□□ 0.39
CLN5-209ENST00000636405 C17orf53Q8N3J3 647 aaPredicted RBP17.46■□□□□ 0.39
CLN5-209ENST00000636405 FAM200AQ8TCP9 573 aa17.46■□□□□ 0.39
CLN5-209ENST00000636405 ZNF384Q8TF68 577 aa17.46■□□□□ 0.39
CLN5-209ENST00000636405 ARHGEF1Q92888 912 aaKnown RBP17.46■□□□□ 0.39
CLN5-209ENST00000636405 NARFQ9UHQ1 456 aa17.46■□□□□ 0.38
CLN5-209ENST00000636405 RREB1Q92766 1687 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 WDR19Q8NEZ3 1342 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 RPS6KA4O75676 772 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 KIF23Q02241 960 aaPredicted RBP17.45■□□□□ 0.38
CLN5-209ENST00000636405 STK38Q15208 465 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 MYSM1Q5VVJ2 828 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 LINC00301Q8NCQ3 95 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 TMEM87BQ96K49 555 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 SLC12A7Q9Y666 1083 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 CNTNAP4Q9C0A0 1308 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 MAGEB6P1A0A0J9YX57 407 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 NPHP1O15259 732 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 MARCKSP29966 332 aaPredicted RBP17.45■□□□□ 0.38
CLN5-209ENST00000636405 GUCY1A2P33402 732 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 RPS8P62241 208 aaKnown RBP17.45■□□□□ 0.38
CLN5-209ENST00000636405 CHAF1AQ13111 956 aaPredicted RBP17.45■□□□□ 0.38
CLN5-209ENST00000636405 SF3A1Q15459 793 aaKnown RBP17.45■□□□□ 0.38
CLN5-209ENST00000636405 NTRK3Q16288 839 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 CAVIN4Q5BKX8 364 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 RBM43Q6ZSC3 357 aaKnown RBP17.45■□□□□ 0.38
CLN5-209ENST00000636405 TXNRD3Q86VQ6 643 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 NLRP3Q96P20 1036 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 SLC26A6Q9BXS9 759 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 NACAP1Q9BZK3 213 aa17.45■□□□□ 0.38
CLN5-209ENST00000636405 ZNF804BA4D1E1 1349 aa17.44■□□□□ 0.38
CLN5-209ENST00000636405 CCDC69A6NI79 296 aa17.44■□□□□ 0.38
CLN5-209ENST00000636405 PRDM1O75626 825 aa17.44■□□□□ 0.38
CLN5-209ENST00000636405 UBE4AQ14139 1066 aa17.44■□□□□ 0.38
CLN5-209ENST00000636405 KRT40Q6A162 431 aa17.44■□□□□ 0.38
CLN5-209ENST00000636405 CCDC73Q6ZRK6 1079 aa17.44■□□□□ 0.38
CLN5-209ENST00000636405 RTEL1Q9NZ71 1219 aa17.44■□□□□ 0.38
CLN5-209ENST00000636405 ARAP2Q8WZ64 1704 aa17.44■□□□□ 0.38
CLN5-209ENST00000636405 PPARAQ07869 468 aa17.44■□□□□ 0.38
CLN5-209ENST00000636405 SLC4A8Q2Y0W8 1093 aa17.44■□□□□ 0.38
CLN5-209ENST00000636405 FNBP4Q8N3X1 1017 aaPredicted RBP17.44■□□□□ 0.38
CLN5-209ENST00000636405 ENGASEQ8NFI3 743 aa17.44■□□□□ 0.38
CLN5-209ENST00000636405 CHMP4CQ96CF2 233 aa17.44■□□□□ 0.38
CLN5-209ENST00000636405 GNL3LQ9NVN8 582 aaKnown RBP17.44■□□□□ 0.38
CLN5-209ENST00000636405 RTCBQ9Y3I0 505 aaKnown RBP17.44■□□□□ 0.38
CLN5-209ENST00000636405 IARSP41252 1262 aaKnown RBP17.43■□□□□ 0.38
CLN5-209ENST00000636405 NDUFA8P51970 172 aa17.43■□□□□ 0.38
CLN5-209ENST00000636405 C11orf57Q6ZUT1 292 aaPredicted RBP17.43■□□□□ 0.38
CLN5-209ENST00000636405 NUP133Q8WUM0 1156 aa17.43■□□□□ 0.38
CLN5-209ENST00000636405 COL5A3P25940 1745 aaPredicted RBP17.43■□□□□ 0.38
CLN5-209ENST00000636405 PNPLA7Q6ZV29 1317 aa17.43■□□□□ 0.38
CLN5-209ENST00000636405 ZNF165P49910 485 aa17.43■□□□□ 0.38
CLN5-209ENST00000636405 SYNE3Q6ZMZ3 975 aa17.43■□□□□ 0.38
CLN5-209ENST00000636405 SLC10A5Q5PT55 438 aa17.42■□□□□ 0.38
CLN5-209ENST00000636405 SGMS1Q86VZ5 419 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms