RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 LRIT3Q3SXY7 679 aa23.15■■□□□ 1.3
CLN6-212ENST00000636020 PAWRQ96IZ0 340 aaKnown RBP23.15■■□□□ 1.3
CLN6-212ENST00000636020 FAM84BQ96KN1 310 aaPredicted RBP23.15■■□□□ 1.3
CLN6-212ENST00000636020 CRISPLD2Q9H0B8 497 aa23.15■■□□□ 1.3
CLN6-212ENST00000636020 ALPK3Q96L96 1907 aa23.14■■□□□ 1.3
CLN6-212ENST00000636020 INPP5BP32019 993 aa23.14■■□□□ 1.29
CLN6-212ENST00000636020 FKBP1CQ5VVH2 108 aa23.14■■□□□ 1.29
CLN6-212ENST00000636020 DCAF15Q66K64 600 aa23.14■■□□□ 1.29
CLN6-212ENST00000636020 LDHAL6AQ6ZMR3 332 aa23.14■■□□□ 1.29
CLN6-212ENST00000636020 LINS1Q8NG48 757 aa23.14■■□□□ 1.29
CLN6-212ENST00000636020 ZNF341Q9BYN7 854 aa23.14■■□□□ 1.29
CLN6-212ENST00000636020 INHAP05111 366 aa23.13■■□□□ 1.29
CLN6-212ENST00000636020 ELNP15502 786 aa23.13■■□□□ 1.29
CLN6-212ENST00000636020 UBE4AQ14139 1066 aa23.13■■□□□ 1.29
CLN6-212ENST00000636020 PXYLP1Q8TE99 480 aa23.13■■□□□ 1.29
CLN6-212ENST00000636020 ZNF594Q96JF6 807 aaPredicted RBP23.13■■□□□ 1.29
CLN6-212ENST00000636020 PARK7Q99497 189 aaKnown RBP23.13■■□□□ 1.29
CLN6-212ENST00000636020 PAK6Q9NQU5 681 aaPredicted RBP23.13■■□□□ 1.29
CLN6-212ENST00000636020 CHMP3Q9Y3E7 222 aa23.13■■□□□ 1.29
CLN6-212ENST00000636020 MGAMO43451 1857 aa23.13■■□□□ 1.29
CLN6-212ENST00000636020 MYBBP1AQ9BQG0 1328 aaKnown RBP23.12■■□□□ 1.29
CLN6-212ENST00000636020 LAMA2P24043 3122 aaKnown RBP23.12■■□□□ 1.29
CLN6-212ENST00000636020 APAF1O14727 1248 aa23.12■■□□□ 1.29
CLN6-212ENST00000636020 SLC4A2P04920 1241 aa23.12■■□□□ 1.29
CLN6-212ENST00000636020 FLT3LGP49771 235 aa23.12■■□□□ 1.29
CLN6-212ENST00000636020 BCAMP50895 628 aa23.12■■□□□ 1.29
CLN6-212ENST00000636020 GPAT2Q6NUI2 795 aa23.12■■□□□ 1.29
CLN6-212ENST00000636020 MIGA2Q7L4E1 593 aa23.12■■□□□ 1.29
CLN6-212ENST00000636020 CYP2C8P10632 490 aa23.11■■□□□ 1.29
CLN6-212ENST00000636020 NECAB2Q7Z6G3 386 aa23.11■■□□□ 1.29
CLN6-212ENST00000636020 DNAAF4Q8WXU2 420 aa23.11■■□□□ 1.29
CLN6-212ENST00000636020 TEKT1Q969V4 418 aa23.11■■□□□ 1.29
CLN6-212ENST00000636020 CNNM1Q9NRU3 951 aa23.11■■□□□ 1.29
CLN6-212ENST00000636020 TMOD2Q9NZR1 351 aa23.11■■□□□ 1.29
CLN6-212ENST00000636020 ZNF112Q9UJU3 913 aa23.11■■□□□ 1.29
CLN6-212ENST00000636020 ZMYND8Q9ULU4 1186 aaPredicted RBP23.11■■□□□ 1.29
CLN6-212ENST00000636020 IRF5Q13568 498 aa23.1■■□□□ 1.29
CLN6-212ENST00000636020 LMBR1LQ6UX01 489 aa23.1■■□□□ 1.29
CLN6-212ENST00000636020 C7orf61Q8IZ16 206 aa23.1■■□□□ 1.29
CLN6-212ENST00000636020 DIS3LQ8TF46 1054 aaKnown RBP23.1■■□□□ 1.29
CLN6-212ENST00000636020 ZDHHC15Q96MV8 337 aa23.1■■□□□ 1.29
CLN6-212ENST00000636020 MRIQ9BWK5 157 aa23.1■■□□□ 1.29
CLN6-212ENST00000636020 RPAP1Q9BWH6 1393 aaPredicted RBP23.1■■□□□ 1.29
CLN6-212ENST00000636020 CCDC57Q2TAC2 916 aa23.09■■□□□ 1.29
CLN6-212ENST00000636020 APOBEC3HQ6NTF7 200 aaKnown RBP23.09■■□□□ 1.29
CLN6-212ENST00000636020 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.09■■□□□ 1.29
CLN6-212ENST00000636020 FLIIQ13045 1269 aa23.08■■□□□ 1.29
CLN6-212ENST00000636020 TAF7LQ5H9L4 462 aa23.08■■□□□ 1.29
CLN6-212ENST00000636020 TDHQ8IZJ6 230 aa23.08■■□□□ 1.29
CLN6-212ENST00000636020 EYSQ5T1H1 3165 aa23.07■■□□□ 1.28
CLN6-212ENST00000636020 CXCL11O14625 94 aa23.07■■□□□ 1.28
CLN6-212ENST00000636020 EPHA10Q5JZY3 1008 aa23.07■■□□□ 1.28
CLN6-212ENST00000636020 FBXO33Q7Z6M2 555 aa23.07■■□□□ 1.28
CLN6-212ENST00000636020 TBC1D22AQ8WUA7 517 aa23.07■■□□□ 1.28
CLN6-212ENST00000636020 MAGEA10P43363 369 aaPredicted RBP23.06■■□□□ 1.28
CLN6-212ENST00000636020 CHAF1AQ13111 956 aaPredicted RBP23.06■■□□□ 1.28
CLN6-212ENST00000636020 FKBP5Q13451 457 aaPredicted RBP23.06■■□□□ 1.28
CLN6-212ENST00000636020 NOL9Q5SY16 702 aaKnown RBP23.06■■□□□ 1.28
CLN6-212ENST00000636020 IQSEC3Q9UPP2 1182 aaPredicted RBP23.06■■□□□ 1.28
CLN6-212ENST00000636020 ANKLE1Q8NAG6 615 aa23.05■■□□□ 1.28
CLN6-212ENST00000636020 TSR2Q969E8 191 aaKnown RBP23.05■■□□□ 1.28
CLN6-212ENST00000636020 TNPO2O14787 897 aaKnown RBP23.04■■□□□ 1.28
CLN6-212ENST00000636020 SYN1P17600 705 aa23.04■■□□□ 1.28
CLN6-212ENST00000636020 TWISTNBQ3B726 338 aaPredicted RBP23.04■■□□□ 1.28
CLN6-212ENST00000636020 FAM151AQ8WW52 585 aa23.04■■□□□ 1.28
CLN6-212ENST00000636020 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.04■■□□□ 1.284e-8■■■■□ 25.2
CLN6-212ENST00000636020 PRUNE2Q8WUY3 3088 aa23.03■■□□□ 1.28
CLN6-212ENST00000636020 SPTBN5Q9NRC6 3674 aaKnown RBP23.03■■□□□ 1.28
CLN6-212ENST00000636020 DOCK3Q8IZD9 2030 aa23.03■■□□□ 1.28
CLN6-212ENST00000636020 HHIPL2Q6UWX4 724 aa23.02■■□□□ 1.28
CLN6-212ENST00000636020 VPS37DQ86XT2 251 aa23.02■■□□□ 1.28
CLN6-212ENST00000636020 PUS3Q9BZE2 481 aaKnown RBP23.02■■□□□ 1.28
CLN6-212ENST00000636020 A0A0G2JLL6 359 aaPredicted RBP23.01■■□□□ 1.27
CLN6-212ENST00000636020 FASTKD5Q7L8L6 764 aaKnown RBP23.01■■□□□ 1.27
CLN6-212ENST00000636020 PRRT2Q7Z6L0 340 aaPredicted RBP23.01■■□□□ 1.27
CLN6-212ENST00000636020 UBE2OQ9C0C9 1292 aaKnown RBP23.01■■□□□ 1.27
CLN6-212ENST00000636020 NBPF3Q9H094 633 aa23.01■■□□□ 1.27
CLN6-212ENST00000636020 SUGT1Q9Y2Z0 365 aa23.01■■□□□ 1.27
CLN6-212ENST00000636020 FRAT2O75474 233 aaPredicted RBP23■■□□□ 1.27
CLN6-212ENST00000636020 BEND3Q5T5X7 828 aa23■■□□□ 1.27
CLN6-212ENST00000636020 TAOK2Q9UL54 1235 aa23■■□□□ 1.27
CLN6-212ENST00000636020 SLC45A1Q9Y2W3 748 aa23■■□□□ 1.27
CLN6-212ENST00000636020 MAST3O60307 1309 aa23■■□□□ 1.27
CLN6-212ENST00000636020 RPTORQ8N122 1335 aa23■■□□□ 1.27
CLN6-212ENST00000636020 POTEB2H3BUK9 544 aa22.98■■□□□ 1.27
CLN6-212ENST00000636020 TCP10Q12799 353 aa22.98■■□□□ 1.27
CLN6-212ENST00000636020 FAM109BQ6ICB4 259 aaPredicted RBP22.98■■□□□ 1.27
CLN6-212ENST00000636020 COA7Q96BR5 231 aa22.98■■□□□ 1.27
CLN6-212ENST00000636020 GUCD1Q96NT3 240 aa22.98■■□□□ 1.27
CLN6-212ENST00000636020 ZHX2Q9Y6X8 837 aa22.98■■□□□ 1.27
CLN6-212ENST00000636020 CAVIN4Q5BKX8 364 aa22.97■■□□□ 1.27
CLN6-212ENST00000636020 GADL1Q6ZQY3 521 aa22.97■■□□□ 1.27
CLN6-212ENST00000636020 C11orf49Q9H6J7 331 aa22.97■■□□□ 1.27
CLN6-212ENST00000636020 MROH5Q6ZUA9 1318 aa22.97■■□□□ 1.27
CLN6-212ENST00000636020 AK9Q5TCS8 1911 aa22.96■■□□□ 1.27
CLN6-212ENST00000636020 PHF20L1A8MW92 1017 aa22.96■■□□□ 1.27
CLN6-212ENST00000636020 F6X3S4 739 aa22.96■■□□□ 1.27
CLN6-212ENST00000636020 GRM8O00222 908 aa22.96■■□□□ 1.27
CLN6-212ENST00000636020 SMCR8Q8TEV9 937 aaPredicted RBP22.96■■□□□ 1.27
CLN6-212ENST00000636020 PRDM6Q9NQX0 595 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms