RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.49■■□□□ 1.19
CLN6-210ENST00000635747 ALDH1A1P00352 501 aa22.48■■□□□ 1.19
CLN6-210ENST00000635747 ARID4AP29374 1257 aaPredicted RBP22.48■■□□□ 1.19
CLN6-210ENST00000635747 CEP85Q6P2H3 762 aa22.48■■□□□ 1.19
CLN6-210ENST00000635747 FAM151AQ8WW52 585 aa22.48■■□□□ 1.19
CLN6-210ENST00000635747 FAM163AQ96GL9 167 aaPredicted RBP22.48■■□□□ 1.19
CLN6-210ENST00000635747 USP40Q9NVE5 1235 aa22.48■■□□□ 1.19
CLN6-210ENST00000635747 DDX19BQ9UMR2 479 aa22.48■■□□□ 1.19
CLN6-210ENST00000635747 AKAP11Q9UKA4 1901 aa22.48■■□□□ 1.19
CLN6-210ENST00000635747 RPAP1Q9BWH6 1393 aaPredicted RBP22.48■■□□□ 1.19
CLN6-210ENST00000635747 CAPN15O75808 1086 aa22.47■■□□□ 1.19
CLN6-210ENST00000635747 MAP3K9P80192 1104 aa22.47■■□□□ 1.19
CLN6-210ENST00000635747 TNNI3KQ59H18 835 aa22.47■■□□□ 1.19
CLN6-210ENST00000635747 CCDC158Q5M9N0 1113 aa22.47■■□□□ 1.19
CLN6-210ENST00000635747 DCAF15Q66K64 600 aa22.47■■□□□ 1.19
CLN6-210ENST00000635747 SPATA5Q8NB90 893 aa22.47■■□□□ 1.19
CLN6-210ENST00000635747 HMG20BQ9P0W2 317 aa22.47■■□□□ 1.19
CLN6-210ENST00000635747 CSADQ9Y600 493 aa22.47■■□□□ 1.19
CLN6-210ENST00000635747 FPGT-TNNI3KV9GXZ4 949 aa22.47■■□□□ 1.19
CLN6-210ENST00000635747 CDAN1Q8IWY9 1227 aa22.46■■□□□ 1.19
CLN6-210ENST00000635747 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.46■■□□□ 1.19
CLN6-210ENST00000635747 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.46■■□□□ 1.19
CLN6-210ENST00000635747 GAKO14976 1311 aa22.46■■□□□ 1.19
CLN6-210ENST00000635747 GSTO1P78417 241 aa22.45■■□□□ 1.18
CLN6-210ENST00000635747 HSP90AB4PQ58FF6 505 aa22.45■■□□□ 1.18
CLN6-210ENST00000635747 NOM1Q5C9Z4 860 aaKnown RBP22.45■■□□□ 1.18
CLN6-210ENST00000635747 OTUD7BQ6GQQ9 843 aa22.45■■□□□ 1.18
CLN6-210ENST00000635747 ERC1Q8IUD2 1116 aa22.45■■□□□ 1.18
CLN6-210ENST00000635747 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.45■■□□□ 1.18
CLN6-210ENST00000635747 CFHR5Q9BXR6 569 aa22.45■■□□□ 1.18
CLN6-210ENST00000635747 LDHCP07864 332 aa22.44■■□□□ 1.18
CLN6-210ENST00000635747 TTC39AQ5SRH9 613 aa22.44■■□□□ 1.18
CLN6-210ENST00000635747 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.44■■□□□ 1.18
CLN6-210ENST00000635747 ELP3Q9H9T3 547 aa22.44■■□□□ 1.18
CLN6-210ENST00000635747 IGSF3O75054 1194 aa22.43■■□□□ 1.18
CLN6-210ENST00000635747 MECOMQ03112 1051 aa22.43■■□□□ 1.18
CLN6-210ENST00000635747 RPAP2Q8IXW5 612 aaPredicted RBP22.43■■□□□ 1.18
CLN6-210ENST00000635747 OPTNQ96CV9 577 aa22.43■■□□□ 1.18
CLN6-210ENST00000635747 ABHD8Q96I13 439 aa22.43■■□□□ 1.18
CLN6-210ENST00000635747 ZNF512BQ96KM6 892 aaPredicted RBP22.43■■□□□ 1.18
CLN6-210ENST00000635747 IDI2Q9BXS1 227 aa22.43■■□□□ 1.18
CLN6-210ENST00000635747 MROH7-TTC4A0A0A0MT08 1334 aa22.42■■□□□ 1.18
CLN6-210ENST00000635747 HMMRO75330 724 aa22.42■■□□□ 1.18
CLN6-210ENST00000635747 ENTPD3O75355 529 aa22.42■■□□□ 1.18
CLN6-210ENST00000635747 MAP4K4O95819 1239 aaPredicted RBP22.42■■□□□ 1.18
CLN6-210ENST00000635747 MCAMP43121 646 aa22.42■■□□□ 1.18
CLN6-210ENST00000635747 TCP10Q12799 353 aa22.42■■□□□ 1.18
CLN6-210ENST00000635747 DGKZQ13574 1117 aa22.42■■□□□ 1.18
CLN6-210ENST00000635747 VGLL4Q14135 290 aa22.42■■□□□ 1.18
CLN6-210ENST00000635747 IFNL1Q8IU54 200 aa22.42■■□□□ 1.18
CLN6-210ENST00000635747 WRNIP1Q96S55 665 aa22.42■■□□□ 1.18
CLN6-210ENST00000635747 ZNF341Q9BYN7 854 aa22.42■■□□□ 1.18
CLN6-210ENST00000635747 FAM198AQ9UFP1 575 aa22.42■■□□□ 1.18
CLN6-210ENST00000635747 COG6Q9Y2V7 657 aa22.42■■□□□ 1.18
CLN6-210ENST00000635747 CASP8AP2Q9UKL3 1982 aa22.41■■□□□ 1.18
CLN6-210ENST00000635747 TBC1D8O95759 1140 aa22.41■■□□□ 1.18
CLN6-210ENST00000635747 NFIAQ12857 509 aa22.41■■□□□ 1.18
CLN6-210ENST00000635747 PDE3AQ14432 1141 aa22.41■■□□□ 1.18
CLN6-210ENST00000635747 DBNDD2Q9BQY9 259 aa22.41■■□□□ 1.18
CLN6-210ENST00000635747 ZBTB40Q9NUA8 1239 aa22.41■■□□□ 1.18
CLN6-210ENST00000635747 RAI14Q9P0K7 980 aa22.41■■□□□ 1.18
CLN6-210ENST00000635747 LRP2BPQ9P2M1 347 aa22.41■■□□□ 1.18
CLN6-210ENST00000635747 GPR75-ASB3A0A0A6YYF3 556 aa22.4■■□□□ 1.18
CLN6-210ENST00000635747 TESPA1A2RU30 521 aaPredicted RBP22.4■■□□□ 1.18
CLN6-210ENST00000635747 GJA5P36382 358 aa22.4■■□□□ 1.18
CLN6-210ENST00000635747 BTDP43251 543 aa22.4■■□□□ 1.18
CLN6-210ENST00000635747 PI16Q6UXB8 463 aa22.4■■□□□ 1.18
CLN6-210ENST00000635747 NSUN4Q96CB9 384 aaKnown RBP22.4■■□□□ 1.18
CLN6-210ENST00000635747 MCOLN1Q9GZU1 580 aa22.4■■□□□ 1.18
CLN6-210ENST00000635747 GTF2A2P52657 109 aa22.39■■□□□ 1.17
CLN6-210ENST00000635747 TBC1D9Q6ZT07 1266 aa22.39■■□□□ 1.17
CLN6-210ENST00000635747 MIGA2Q7L4E1 593 aa22.39■■□□□ 1.17
CLN6-210ENST00000635747 ERO1BQ86YB8 467 aa22.39■■□□□ 1.17
CLN6-210ENST00000635747 SPDYE5A6NIY4 337 aa22.38■■□□□ 1.17
CLN6-210ENST00000635747 GPR25O00155 361 aa22.38■■□□□ 1.17
CLN6-210ENST00000635747 RGS3P49796 1198 aa22.38■■□□□ 1.17
CLN6-210ENST00000635747 CTU1Q7Z7A3 348 aaKnown RBP22.38■■□□□ 1.17
CLN6-210ENST00000635747 NPM3O75607 178 aaKnown RBP22.37■■□□□ 1.17
CLN6-210ENST00000635747 ZNF296Q8WUU4 475 aaPredicted RBP22.37■■□□□ 1.17
CLN6-210ENST00000635747 EAF2Q96CJ1 260 aaPredicted RBP22.37■■□□□ 1.17
CLN6-210ENST00000635747 MS4A4AQ96JQ5 239 aa22.37■■□□□ 1.17
CLN6-210ENST00000635747 NOL10Q9BSC4 688 aaKnown RBP22.37■■□□□ 1.17
CLN6-210ENST00000635747 CCDC8Q9H0W5 538 aaPredicted RBP22.37■■□□□ 1.17
CLN6-210ENST00000635747 ZNF112Q9UJU3 913 aa22.37■■□□□ 1.17
CLN6-210ENST00000635747 DBNLQ9UJU6 430 aaKnown RBP22.37■■□□□ 1.17
CLN6-210ENST00000635747 EXOC6BQ9Y2D4 811 aa22.37■■□□□ 1.17
CLN6-210ENST00000635747 MYH2Q9UKX2 1941 aa22.37■■□□□ 1.17
CLN6-210ENST00000635747 IGF2BP3O00425 579 aaKnown RBP eCLIP22.36■■□□□ 1.17
CLN6-210ENST00000635747 PKN2Q16513 984 aaKnown RBP22.36■■□□□ 1.17
CLN6-210ENST00000635747 ZSCAN29Q8IWY8 852 aaPredicted RBP22.36■■□□□ 1.17
CLN6-210ENST00000635747 ZKSCAN4Q969J2 545 aaPredicted RBP22.36■■□□□ 1.17
CLN6-210ENST00000635747 OTUD5Q96G74 571 aa22.36■■□□□ 1.17
CLN6-210ENST00000635747 SNRKQ9NRH2 765 aa22.36■■□□□ 1.17
CLN6-210ENST00000635747 SNCAIPQ9Y6H5 919 aa22.36■■□□□ 1.17
CLN6-210ENST00000635747 FKTNO75072 461 aa22.35■■□□□ 1.17
CLN6-210ENST00000635747 WDHD1O75717 1129 aaPredicted RBP22.35■■□□□ 1.17
CLN6-210ENST00000635747 NAA16Q6N069 864 aaPredicted RBP22.35■■□□□ 1.17
CLN6-210ENST00000635747 ZNF384Q8TF68 577 aa22.35■■□□□ 1.17
CLN6-210ENST00000635747 KIF1BPQ96EK5 621 aa22.35■■□□□ 1.17
CLN6-210ENST00000635747 BAG3O95817 575 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms