RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 TMEM67Q5HYA8 995 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 MICALL1Q8N3F8 863 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 ENGASEQ8NFI3 743 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 LRRC59Q96AG4 307 aaKnown RBP9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 TAF6LQ9Y6J9 622 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 PIK3C2BO00750 1634 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 NEURL1BA8MQ27 555 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 SNRPA1P09661 255 aaKnown RBP9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 DNAJC21Q5F1R6 531 aaKnown RBP9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 VPS37DQ86XT2 251 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 CCDC82Q8N4S0 544 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 NAA15Q9BXJ9 866 aaKnown RBP9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 CDC23Q9UJX2 597 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 EBAG9O00559 213 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 CABP4P57796 275 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 CKAP4Q07065 602 aaKnown RBP9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 SPAG1Q07617 926 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 NBPF6Q5VWK0 638 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 USPL1Q5W0Q7 1092 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 KRT40Q6A162 431 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 THEMISQ8N1K5 641 aaPredicted RBP9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 DHX58Q96C10 678 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 NBPF4Q96M43 638 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 PCDHA5Q9Y5H7 936 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 MNAT1P51948 309 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 STIM1Q13586 685 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 CCDC181Q5TID7 509 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 GPATCH11Q8N954 259 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 AFAP1L1Q8TED9 768 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 AIDAQ96BJ3 306 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 NACAP1Q9BZK3 213 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 FEZ2Q9UHY8 353 aaPredicted RBP9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 ANKRD26Q9UPS8 1709 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 EIF5P55010 431 aaKnown RBP9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 NAP1L1P55209 391 aaKnown RBP9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 STX17P56962 302 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 MUM1L1Q5H9M0 696 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 EPC1Q9H2F5 836 aa9.55□□□□□ -0.88
SMARCA2-246ENST00000635739 MED23Q9ULK4 1368 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 AFMP43652 599 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 POSTNQ15063 836 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 EHBP1Q8NDI1 1231 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 CWC25Q9NXE8 425 aaPredicted RBP9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 KNDC1Q76NI1 1749 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 USP31Q70CQ4 1352 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 GYS2P54840 703 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 TRMT44Q8IYL2 757 aaKnown RBP9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 FAM71BQ8TC56 605 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 NAPBQ9H115 298 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 C19orf44Q9H6X5 657 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 CNNM1Q9NRU3 951 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 KCND1Q9NSA2 647 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 ZNF446Q9NWS9 450 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 ROBO2Q9HCK4 1378 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 POLR2DO15514 142 aaKnown RBP9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 ST5P78524 1137 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 PTPN21Q16825 1174 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 MED4Q9NPJ6 270 aa9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 ANGEL1Q9UNK9 670 aaKnown RBP9.54□□□□□ -0.88
SMARCA2-246ENST00000635739 RXRAP19793 462 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 TMTC1Q8IUR5 882 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 CCDC85AQ96PX6 553 aaPredicted RBP9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 UBAC1Q9BSL1 405 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 SH3TC1Q8TE82 1336 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 PPP6R2O75170 966 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 CDR1P51861 262 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 KIF23Q02241 960 aaPredicted RBP9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 WHAMMP3Q1A5X7 153 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 ZMYM1Q5SVZ6 1142 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 GUCA1BQ9UMX6 200 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 ATF3P18847 181 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 RILPL1Q5EBL4 403 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 METTL24Q5JXM2 366 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 SPECC1Q5M775 1068 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 FAN1Q9Y2M0 1017 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 OVOS2A0A0J9YW53 1432 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 OVOS2Q6IE36 1432 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 TDO2P48775 406 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 SLC20A2Q08357 652 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 FAM76AQ8TAV0 307 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 PARP3Q9Y6F1 533 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 A2ML1A8K2U0 1454 aa9.53□□□□□ -0.88
SMARCA2-246ENST00000635739 SPA17Q15506 151 aa9.52□□□□□ -0.88
SMARCA2-246ENST00000635739 ZNF790Q6PG37 636 aa9.52□□□□□ -0.88
SMARCA2-246ENST00000635739 CLIC6Q96NY7 704 aa9.52□□□□□ -0.88
SMARCA2-246ENST00000635739 MRFAP1Q9Y605 127 aa9.52□□□□□ -0.88
SMARCA2-246ENST00000635739 EYA2O00167 538 aa9.52□□□□□ -0.89
SMARCA2-246ENST00000635739 MAP3K9P80192 1104 aa9.52□□□□□ -0.89
SMARCA2-246ENST00000635739 TRIML1Q8N9V2 468 aa9.52□□□□□ -0.89
SMARCA2-246ENST00000635739 APPBP2Q92624 585 aa9.52□□□□□ -0.89
SMARCA2-246ENST00000635739 CCDC51Q96ER9 411 aa9.52□□□□□ -0.89
SMARCA2-246ENST00000635739 DRC1Q96MC2 740 aa9.52□□□□□ -0.89
SMARCA2-246ENST00000635739 TMEM232C9JQI7 657 aa9.52□□□□□ -0.89
SMARCA2-246ENST00000635739 MICALCLQ6ZW33 695 aa9.52□□□□□ -0.89
SMARCA2-246ENST00000635739 PHKBQ93100 1093 aa9.52□□□□□ -0.89
SMARCA2-246ENST00000635739 WDR24Q96S15 920 aa9.52□□□□□ -0.89
SMARCA2-246ENST00000635739 JADE2Q9NQC1 790 aa9.52□□□□□ -0.89
SMARCA2-246ENST00000635739 TBC1D8O95759 1140 aa9.51□□□□□ -0.89
SMARCA2-246ENST00000635739 CCDC93Q567U6 631 aa9.51□□□□□ -0.89
SMARCA2-246ENST00000635739 RRAGBQ5VZM2 374 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms