RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 TNNI2P48788 182 aa19.23■□□□□ 0.67
LINC00339-209ENST00000635450 ATP8B2P98198 1209 aa19.23■□□□□ 0.67
LINC00339-209ENST00000635450 NFIAQ12857 509 aa19.23■□□□□ 0.67
LINC00339-209ENST00000635450 G3BP1Q13283 466 aaKnown RBP eCLIP19.23■□□□□ 0.67
LINC00339-209ENST00000635450 PDE3AQ14432 1141 aa19.23■□□□□ 0.67
LINC00339-209ENST00000635450 OPTNQ96CV9 577 aa19.23■□□□□ 0.67
LINC00339-209ENST00000635450 TNRC18O15417 2968 aaPredicted RBP19.22■□□□□ 0.67
LINC00339-209ENST00000635450 A0A1B0GUL7 405 aa19.22■□□□□ 0.67
LINC00339-209ENST00000635450 PTPN18Q99952 460 aa19.22■□□□□ 0.67
LINC00339-209ENST00000635450 MRIQ9BWK5 157 aa19.22■□□□□ 0.67
LINC00339-209ENST00000635450 AKAP2Q9Y2D5 859 aa19.22■□□□□ 0.67
LINC00339-209ENST00000635450 SALL1Q9NSC2 1324 aa19.22■□□□□ 0.67
LINC00339-209ENST00000635450 CDC42EP5Q6NZY7 148 aa19.21■□□□□ 0.67
LINC00339-209ENST00000635450 PI16Q6UXB8 463 aa19.21■□□□□ 0.67
LINC00339-209ENST00000635450 XAGE2Q96GT9 111 aa19.21■□□□□ 0.67
LINC00339-209ENST00000635450 CFHR5Q9BXR6 569 aa19.21■□□□□ 0.67
LINC00339-209ENST00000635450 TMOD2Q9NZR1 351 aa19.21■□□□□ 0.67
LINC00339-209ENST00000635450 SNCAIPQ9Y6H5 919 aa19.21■□□□□ 0.67
LINC00339-209ENST00000635450 RFX7Q2KHR2 1363 aa19.2■□□□□ 0.66
LINC00339-209ENST00000635450 MAST2Q6P0Q8 1798 aa19.2■□□□□ 0.66
LINC00339-209ENST00000635450 LDHBP07195 334 aaKnown RBP19.2■□□□□ 0.66
LINC00339-209ENST00000635450 CAP1Q01518 475 aa19.2■□□□□ 0.66
LINC00339-209ENST00000635450 TCP10Q12799 353 aa19.2■□□□□ 0.66
LINC00339-209ENST00000635450 OS9Q13438 667 aaPredicted RBP19.2■□□□□ 0.66
LINC00339-209ENST00000635450 POLA2Q14181 598 aa19.2■□□□□ 0.66
LINC00339-209ENST00000635450 FAM83AQ86UY5 434 aa19.2■□□□□ 0.66
LINC00339-209ENST00000635450 SSH3Q8TE77 659 aa19.2■□□□□ 0.66
LINC00339-209ENST00000635450 MS4A4AQ96JQ5 239 aa19.2■□□□□ 0.66
LINC00339-209ENST00000635450 GNL3LQ9NVN8 582 aaKnown RBP19.2■□□□□ 0.66
LINC00339-209ENST00000635450 FAM198AQ9UFP1 575 aa19.2■□□□□ 0.66
LINC00339-209ENST00000635450 DENND2AQ9ULE3 1009 aa19.2■□□□□ 0.66
LINC00339-209ENST00000635450 UNCXA6NJT0 531 aa19.19■□□□□ 0.66
LINC00339-209ENST00000635450 SOX10P56693 466 aa19.19■□□□□ 0.66
LINC00339-209ENST00000635450 FKBP1CQ5VVH2 108 aa19.19■□□□□ 0.66
LINC00339-209ENST00000635450 ZFPM1Q8IX07 1006 aa19.19■□□□□ 0.66
LINC00339-209ENST00000635450 BRI3BPQ8WY22 251 aa19.19■□□□□ 0.66
LINC00339-209ENST00000635450 ZKSCAN4Q969J2 545 aaPredicted RBP19.19■□□□□ 0.66
LINC00339-209ENST00000635450 OTUD5Q96G74 571 aa19.19■□□□□ 0.66
LINC00339-209ENST00000635450 WRNIP1Q96S55 665 aa19.19■□□□□ 0.66
LINC00339-209ENST00000635450 CDK5RAP2Q96SN8 1893 aa19.19■□□□□ 0.66
LINC00339-209ENST00000635450 CENPFP49454 3210 aa19.19■□□□□ 0.66
LINC00339-209ENST00000635450 SEMA3EO15041 775 aa19.18■□□□□ 0.66
LINC00339-209ENST00000635450 SURF6O75683 361 aaKnown RBP19.18■□□□□ 0.66
LINC00339-209ENST00000635450 MAP3K9P80192 1104 aa19.18■□□□□ 0.66
LINC00339-209ENST00000635450 CRHR2Q13324 411 aa19.18■□□□□ 0.66
LINC00339-209ENST00000635450 NOM1Q5C9Z4 860 aaKnown RBP19.18■□□□□ 0.66
LINC00339-209ENST00000635450 CEP85Q6P2H3 762 aa19.18■□□□□ 0.66
LINC00339-209ENST00000635450 MIGA2Q7L4E1 593 aa19.18■□□□□ 0.66
LINC00339-209ENST00000635450 ZNF384Q8TF68 577 aa19.18■□□□□ 0.66
LINC00339-209ENST00000635450 HPS5Q9UPZ3 1129 aa19.18■□□□□ 0.66
LINC00339-209ENST00000635450 TESPA1A2RU30 521 aaPredicted RBP19.17■□□□□ 0.66
LINC00339-209ENST00000635450 FKTNO75072 461 aa19.17■□□□□ 0.66
LINC00339-209ENST00000635450 C20orf194Q5TEA3 1177 aa19.17■□□□□ 0.66
LINC00339-209ENST00000635450 GAKO14976 1311 aa19.17■□□□□ 0.66
LINC00339-209ENST00000635450 PTPRFP10586 1907 aa19.17■□□□□ 0.66
LINC00339-209ENST00000635450 ATRNL1Q5VV63 1379 aa19.17■□□□□ 0.66
LINC00339-209ENST00000635450 DOCK1Q14185 1865 aa19.16■□□□□ 0.66
LINC00339-209ENST00000635450 SPDYE5A6NIY4 337 aa19.16■□□□□ 0.66
LINC00339-209ENST00000635450 SLURP2P0DP57 97 aa19.16■□□□□ 0.66
LINC00339-209ENST00000635450 INPP5BP32019 993 aa19.16■□□□□ 0.66
LINC00339-209ENST00000635450 RGS19P49795 217 aa19.16■□□□□ 0.66
LINC00339-209ENST00000635450 NEUROD6Q96NK8 337 aa19.16■□□□□ 0.66
LINC00339-209ENST00000635450 ZBTB40Q9NUA8 1239 aa19.16■□□□□ 0.66
LINC00339-209ENST00000635450 ABCF2Q9UG63 623 aa19.16■□□□□ 0.66
LINC00339-209ENST00000635450 CSADQ9Y600 493 aa19.16■□□□□ 0.66
LINC00339-209ENST00000635450 PDS5AQ29RF7 1337 aaKnown RBP19.16■□□□□ 0.66
LINC00339-209ENST00000635450 PHIPQ8WWQ0 1821 aa19.16■□□□□ 0.66
LINC00339-209ENST00000635450 CCL15-CCL14A0A0B4J2E2 113 aa19.15■□□□□ 0.66
LINC00339-209ENST00000635450 ZBTB22O15209 634 aa19.15■□□□□ 0.66
LINC00339-209ENST00000635450 ALDH1A1P00352 501 aa19.15■□□□□ 0.66
LINC00339-209ENST00000635450 INHBEP58166 350 aa19.15■□□□□ 0.66
LINC00339-209ENST00000635450 CCL15Q16663 113 aa19.15■□□□□ 0.66
LINC00339-209ENST00000635450 RPAP2Q8IXW5 612 aaPredicted RBP19.15■□□□□ 0.66
LINC00339-209ENST00000635450 FAM151AQ8WW52 585 aa19.15■□□□□ 0.66
LINC00339-209ENST00000635450 USP40Q9NVE5 1235 aa19.15■□□□□ 0.66
LINC00339-209ENST00000635450 HMG20BQ9P0W2 317 aa19.15■□□□□ 0.66
LINC00339-209ENST00000635450 SIPA1L1O43166 1804 aa19.15■□□□□ 0.66
LINC00339-209ENST00000635450 PDE4DIPQ5VU43 2346 aa19.14■□□□□ 0.66
LINC00339-209ENST00000635450 HMMRO75330 724 aa19.14■□□□□ 0.65
LINC00339-209ENST00000635450 GORABQ5T7V8 394 aa19.14■□□□□ 0.65
LINC00339-209ENST00000635450 TBC1D9Q6ZT07 1266 aa19.14■□□□□ 0.65
LINC00339-209ENST00000635450 DZIP1Q86YF9 867 aaKnown RBP19.14■□□□□ 0.65
LINC00339-209ENST00000635450 FAM43AQ8N2R8 423 aa19.14■□□□□ 0.65
LINC00339-209ENST00000635450 NOP58Q9Y2X3 529 aaKnown RBP19.14■□□□□ 0.65
LINC00339-209ENST00000635450 ATAD5Q96QE3 1844 aa19.14■□□□□ 0.65
LINC00339-209ENST00000635450 BRCA2P51587 3418 aa19.13■□□□□ 0.65
LINC00339-209ENST00000635450 MCAMP43121 646 aa19.13■□□□□ 0.65
LINC00339-209ENST00000635450 RGS3P49796 1198 aa19.13■□□□□ 0.65
LINC00339-209ENST00000635450 RRP1P56182 461 aaKnown RBP19.13■□□□□ 0.65
LINC00339-209ENST00000635450 MECOMQ03112 1051 aa19.13■□□□□ 0.65
LINC00339-209ENST00000635450 SH3BP5LQ7L8J4 393 aa19.13■□□□□ 0.65
LINC00339-209ENST00000635450 DDX4Q9NQI0 724 aaKnown RBP19.13■□□□□ 0.65
LINC00339-209ENST00000635450 FOCADQ5VW36 1801 aa19.13■□□□□ 0.65
LINC00339-209ENST00000635450 MROH7-TTC4A0A0A0MT08 1334 aa19.12■□□□□ 0.65
LINC00339-209ENST00000635450 IRF6O14896 467 aa19.12■□□□□ 0.65
LINC00339-209ENST00000635450 ARID4AP29374 1257 aaPredicted RBP19.12■□□□□ 0.65
LINC00339-209ENST00000635450 BTDP43251 543 aa19.12■□□□□ 0.65
LINC00339-209ENST00000635450 MLLT1Q03111 559 aaPredicted RBP19.12■□□□□ 0.65
LINC00339-209ENST00000635450 HSP90AB4PQ58FF6 505 aa19.12■□□□□ 0.65
LINC00339-209ENST00000635450 CD99L2Q8TCZ2 262 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms