RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 USP40Q9NVE5 1235 aa13.87□□□□□ -0.19
PTPN7-219ENST00000629151 PGAP2Q9UHJ9 254 aa13.87□□□□□ -0.19
PTPN7-219ENST00000629151 CHD4Q14839 1912 aa13.87□□□□□ -0.19
PTPN7-219ENST00000629151 PITPNM2Q9BZ72 1349 aa13.87□□□□□ -0.19
PTPN7-219ENST00000629151 SCN9AQ15858 1988 aa13.86□□□□□ -0.19
PTPN7-219ENST00000629151 SPDYE2Q495Y8 402 aa13.86□□□□□ -0.19
PTPN7-219ENST00000629151 CDC42EP5Q6NZY7 148 aa13.86□□□□□ -0.19
PTPN7-219ENST00000629151 APOBEC3FQ8IUX4 373 aaKnown RBP13.86□□□□□ -0.19
PTPN7-219ENST00000629151 DCPSQ96C86 337 aaKnown RBP13.86□□□□□ -0.19
PTPN7-219ENST00000629151 RIOK1Q9BRS2 568 aaKnown RBP13.86□□□□□ -0.19
PTPN7-219ENST00000629151 IDI2Q9BXS1 227 aa13.86□□□□□ -0.19
PTPN7-219ENST00000629151 AATFQ9NY61 560 aaKnown RBP eCLIP13.86□□□□□ -0.19
PTPN7-219ENST00000629151 ZNF70Q9UC06 446 aaPredicted RBP13.86□□□□□ -0.19
PTPN7-219ENST00000629151 TAOK2Q9UL54 1235 aa13.86□□□□□ -0.19
PTPN7-219ENST00000629151 PPP2R3BQ9Y5P8 575 aa13.86□□□□□ -0.19
PTPN7-219ENST00000629151 TIAM2Q8IVF5 1701 aa13.86□□□□□ -0.19
PTPN7-219ENST00000629151 AKAP11Q9UKA4 1901 aa13.86□□□□□ -0.19
PTPN7-219ENST00000629151 ENTPD3O75355 529 aa13.85□□□□□ -0.19
PTPN7-219ENST00000629151 RHBDL3P58872 404 aa13.85□□□□□ -0.19
PTPN7-219ENST00000629151 NMIQ13287 307 aaPredicted RBP13.85□□□□□ -0.19
PTPN7-219ENST00000629151 NBPF9Q3BBW0 867 aa13.85□□□□□ -0.19
PTPN7-219ENST00000629151 GIMAP6Q6P9H5 292 aa13.85□□□□□ -0.19
PTPN7-219ENST00000629151 CWC27Q6UX04 472 aaKnown RBP13.85□□□□□ -0.19
PTPN7-219ENST00000629151 FAM83AQ86UY5 434 aa13.85□□□□□ -0.19
PTPN7-219ENST00000629151 LDHDQ86WU2 507 aa13.85□□□□□ -0.19
PTPN7-219ENST00000629151 MIGA1Q8NAN2 632 aa13.85□□□□□ -0.19
PTPN7-219ENST00000629151 OSBP2Q969R2 916 aa13.85□□□□□ -0.19
PTPN7-219ENST00000629151 STRBPQ96SI9 672 aaKnown RBP13.85□□□□□ -0.19
PTPN7-219ENST00000629151 NACAP1Q9BZK3 213 aa13.85□□□□□ -0.19
PTPN7-219ENST00000629151 PUS7LQ9H0K6 701 aaKnown RBP13.85□□□□□ -0.19
PTPN7-219ENST00000629151 TDRD3Q9H7E2 651 aaKnown RBP13.85□□□□□ -0.19
PTPN7-219ENST00000629151 ATP8A2Q9NTI2 1148 aa13.85□□□□□ -0.19
PTPN7-219ENST00000629151 WDR90Q96KV7 1748 aa13.84□□□□□ -0.19
PTPN7-219ENST00000629151 SHTN1A0MZ66 631 aa13.84□□□□□ -0.19
PTPN7-219ENST00000629151 PATL2C9JE40 543 aaKnown RBP13.84□□□□□ -0.19
PTPN7-219ENST00000629151 GPAA1O43292 621 aa13.84□□□□□ -0.19
PTPN7-219ENST00000629151 MBD4O95243 580 aa13.84□□□□□ -0.19
PTPN7-219ENST00000629151 HIRAP54198 1017 aaPredicted RBP13.84□□□□□ -0.19
PTPN7-219ENST00000629151 KIAA1211Q6ZU35 1233 aa13.84□□□□□ -0.19
PTPN7-219ENST00000629151 ADGRA1Q86SQ6 560 aa13.84□□□□□ -0.19
PTPN7-219ENST00000629151 SULF1Q8IWU6 871 aa13.84□□□□□ -0.19
PTPN7-219ENST00000629151 TEX11Q8IYF3 940 aa13.84□□□□□ -0.19
PTPN7-219ENST00000629151 TRPM4Q8TD43 1214 aa13.84□□□□□ -0.19
PTPN7-219ENST00000629151 HOOK2Q96ED9 719 aa13.84□□□□□ -0.19
PTPN7-219ENST00000629151 NMRK2Q9NPI5 230 aa13.84□□□□□ -0.19
PTPN7-219ENST00000629151 PSME4Q14997 1843 aa13.84□□□□□ -0.19
PTPN7-219ENST00000629151 CCDC88AQ3V6T2 1871 aa13.84□□□□□ -0.19
PTPN7-219ENST00000629151 SGSM2O43147 1006 aa13.83□□□□□ -0.2
PTPN7-219ENST00000629151 EPB41L2O43491 1005 aaKnown RBP13.83□□□□□ -0.2
PTPN7-219ENST00000629151 USP5P45974 858 aa13.83□□□□□ -0.2
PTPN7-219ENST00000629151 EAPPQ56P03 285 aaPredicted RBP13.83□□□□□ -0.2
PTPN7-219ENST00000629151 CDC37L1Q7L3B6 337 aa13.83□□□□□ -0.2
PTPN7-219ENST00000629151 AMOTL1Q8IY63 956 aa13.83□□□□□ -0.2
PTPN7-219ENST00000629151 ZNF526Q8TF50 670 aaPredicted RBP13.83□□□□□ -0.2
PTPN7-219ENST00000629151 FAM227BQ96M60 508 aa13.83□□□□□ -0.2
PTPN7-219ENST00000629151 DHX36Q9H2U1 1008 aaKnown RBP13.83□□□□□ -0.2
PTPN7-219ENST00000629151 ARMT1Q9H993 441 aa13.83□□□□□ -0.2
PTPN7-219ENST00000629151 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
PTPN7-219ENST00000629151 CCDC171Q6TFL3 1326 aa13.83□□□□□ -0.2
PTPN7-219ENST00000629151 A0A0D9SFI3 127 aa13.82□□□□□ -0.2
PTPN7-219ENST00000629151 EGFRP00533 1210 aa13.82□□□□□ -0.2
PTPN7-219ENST00000629151 DYNLL1P63167 89 aaKnown RBP13.82□□□□□ -0.2
PTPN7-219ENST00000629151 ANGEL2Q5VTE6 544 aaKnown RBP13.82□□□□□ -0.2
PTPN7-219ENST00000629151 SH3RF3Q8TEJ3 882 aaPredicted RBP13.82□□□□□ -0.2
PTPN7-219ENST00000629151 FAM151AQ8WW52 585 aa13.82□□□□□ -0.2
PTPN7-219ENST00000629151 ESYT1Q9BSJ8 1104 aa13.82□□□□□ -0.2
PTPN7-219ENST00000629151 VEZTQ9HBM0 779 aa13.82□□□□□ -0.2
PTPN7-219ENST00000629151 CTNNA3Q9UI47 895 aa13.82□□□□□ -0.2
PTPN7-219ENST00000629151 SLC4A4Q9Y6R1 1079 aa13.82□□□□□ -0.2
PTPN7-219ENST00000629151 CLRN2A0PK11 232 aa13.81□□□□□ -0.2
PTPN7-219ENST00000629151 M0R2C6 588 aa13.81□□□□□ -0.2
PTPN7-219ENST00000629151 WDHD1O75717 1129 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-219ENST00000629151 REC8O95072 547 aa13.81□□□□□ -0.2
PTPN7-219ENST00000629151 APPP05067 770 aa13.81□□□□□ -0.2
PTPN7-219ENST00000629151 ALX1Q15699 326 aa13.81□□□□□ -0.2
PTPN7-219ENST00000629151 SUPT20HL1Q3ZLR7 823 aa13.81□□□□□ -0.2
PTPN7-219ENST00000629151 TTC6Q86TZ1 520 aa13.81□□□□□ -0.2
PTPN7-219ENST00000629151 LCORLQ8N3X6 602 aa13.81□□□□□ -0.2
PTPN7-219ENST00000629151 DSCC1Q9BVC3 393 aa13.81□□□□□ -0.2
PTPN7-219ENST00000629151 GGA3Q9NZ52 723 aa13.81□□□□□ -0.2
PTPN7-219ENST00000629151 SCN4AP35499 1836 aa13.8□□□□□ -0.2
PTPN7-219ENST00000629151 TOMM70O94826 608 aa13.8□□□□□ -0.2
PTPN7-219ENST00000629151 SLFNL1Q499Z3 407 aa13.8□□□□□ -0.2
PTPN7-219ENST00000629151 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
PTPN7-219ENST00000629151 KRT26Q7Z3Y9 468 aa13.8□□□□□ -0.2
PTPN7-219ENST00000629151 ZNF784Q8NCA9 323 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-219ENST00000629151 TGFBRAP1Q8WUH2 860 aa13.8□□□□□ -0.2
PTPN7-219ENST00000629151 SEC62Q99442 399 aaKnown RBP13.8□□□□□ -0.2
PTPN7-219ENST00000629151 DEFB129Q9H1M3 183 aa13.8□□□□□ -0.2
PTPN7-219ENST00000629151 DCP1AQ9NPI6 582 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-219ENST00000629151 PCDHAC2Q9Y5I4 1007 aa13.8□□□□□ -0.2
PTPN7-219ENST00000629151 MYH13Q9UKX3 1938 aa13.8□□□□□ -0.2
PTPN7-219ENST00000629151 GSG1L2A8MUP6 293 aa13.79□□□□□ -0.2
PTPN7-219ENST00000629151 TCP10L2B9ZVM9 353 aa13.79□□□□□ -0.2
PTPN7-219ENST00000629151 KIF3CO14782 793 aa13.79□□□□□ -0.2
PTPN7-219ENST00000629151 CHGBP05060 677 aa13.79□□□□□ -0.2
PTPN7-219ENST00000629151 HLA-DOAP06340 250 aa13.79□□□□□ -0.2
PTPN7-219ENST00000629151 HSPD1P10809 573 aaKnown RBP13.79□□□□□ -0.2
PTPN7-219ENST00000629151 NF2P35240 595 aa13.79□□□□□ -0.2
PTPN7-219ENST00000629151 RASA3Q14644 834 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms