RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 WNK4Q96J92 1243 aa13.31□□□□□ -0.28
CHD2-217ENST00000629136 NEUROD6Q96NK8 337 aa13.31□□□□□ -0.28
CHD2-217ENST00000629136 GAKO14976 1311 aa13.31□□□□□ -0.28
CHD2-217ENST00000629136 GJA5P36382 358 aa13.3□□□□□ -0.28
CHD2-217ENST00000629136 MCAMP43121 646 aa13.3□□□□□ -0.28
CHD2-217ENST00000629136 TNNI3KQ59H18 835 aa13.3□□□□□ -0.28
CHD2-217ENST00000629136 CDC42EP5Q6NZY7 148 aa13.3□□□□□ -0.28
CHD2-217ENST00000629136 ANKRD13AQ8IZ07 590 aa13.3□□□□□ -0.28
CHD2-217ENST00000629136 ZNF384Q8TF68 577 aa13.3□□□□□ -0.28
CHD2-217ENST00000629136 GPR108Q9NPR9 543 aa13.3□□□□□ -0.28
CHD2-217ENST00000629136 TMOD2Q9NZR1 351 aa13.3□□□□□ -0.28
CHD2-217ENST00000629136 HMG20BQ9P0W2 317 aa13.3□□□□□ -0.28
CHD2-217ENST00000629136 NOP58Q9Y2X3 529 aaKnown RBP13.3□□□□□ -0.28
CHD2-217ENST00000629136 FPGT-TNNI3KV9GXZ4 949 aa13.3□□□□□ -0.28
CHD2-217ENST00000629136 SURF6O75683 361 aaKnown RBP13.29□□□□□ -0.28
CHD2-217ENST00000629136 SREBF2Q12772 1141 aa13.29□□□□□ -0.28
CHD2-217ENST00000629136 NFIAQ12857 509 aa13.29□□□□□ -0.28
CHD2-217ENST00000629136 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.29□□□□□ -0.28
CHD2-217ENST00000629136 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.29□□□□□ -0.28
CHD2-217ENST00000629136 SLC10A4Q96EP9 437 aa13.29□□□□□ -0.28
CHD2-217ENST00000629136 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.29□□□□□ -0.28
CHD2-217ENST00000629136 ABCF2Q9UG63 623 aa13.29□□□□□ -0.28
CHD2-217ENST00000629136 RCAN3Q9UKA8 241 aa13.29□□□□□ -0.28
CHD2-217ENST00000629136 VGLL4Q14135 290 aa13.28□□□□□ -0.28
CHD2-217ENST00000629136 DZIP1Q86YF9 867 aaKnown RBP13.28□□□□□ -0.28
CHD2-217ENST00000629136 SPATA5Q8NB90 893 aa13.28□□□□□ -0.28
CHD2-217ENST00000629136 FAM151AQ8WW52 585 aa13.28□□□□□ -0.28
CHD2-217ENST00000629136 DBNDD2Q9BQY9 259 aa13.28□□□□□ -0.28
CHD2-217ENST00000629136 ELP3Q9H9T3 547 aa13.28□□□□□ -0.28
CHD2-217ENST00000629136 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
CHD2-217ENST00000629136 MROH7-TTC4A0A0A0MT08 1334 aa13.28□□□□□ -0.28
CHD2-217ENST00000629136 ZSWIM8A7E2V4 1837 aa13.27□□□□□ -0.28
CHD2-217ENST00000629136 MYH7P12883 1935 aa13.27□□□□□ -0.28
CHD2-217ENST00000629136 MANSC4A6NHS7 340 aaPredicted RBP13.27□□□□□ -0.29
CHD2-217ENST00000629136 IGF2BP3O00425 579 aaKnown RBP eCLIP13.27□□□□□ -0.29
CHD2-217ENST00000629136 TBC1D8O95759 1140 aa13.27□□□□□ -0.29
CHD2-217ENST00000629136 MS4A1P11836 297 aa13.27□□□□□ -0.29
CHD2-217ENST00000629136 MECOMQ03112 1051 aa13.27□□□□□ -0.29
CHD2-217ENST00000629136 OS9Q13438 667 aaPredicted RBP13.27□□□□□ -0.29
CHD2-217ENST00000629136 GORABQ5T7V8 394 aa13.27□□□□□ -0.29
CHD2-217ENST00000629136 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.29
CHD2-217ENST00000629136 OPTNQ96CV9 577 aa13.27□□□□□ -0.29
CHD2-217ENST00000629136 ABHD8Q96I13 439 aa13.27□□□□□ -0.29
CHD2-217ENST00000629136 CFHR5Q9BXR6 569 aa13.27□□□□□ -0.29
CHD2-217ENST00000629136 MCOLN1Q9GZU1 580 aa13.27□□□□□ -0.29
CHD2-217ENST00000629136 TLR7Q9NYK1 1049 aaKnown RBP13.27□□□□□ -0.29
CHD2-217ENST00000629136 COG6Q9Y2V7 657 aa13.27□□□□□ -0.29
CHD2-217ENST00000629136 ATRNL1Q5VV63 1379 aa13.27□□□□□ -0.29
CHD2-217ENST00000629136 DDX60LQ5H9U9 1706 aaKnown RBP13.27□□□□□ -0.29
CHD2-217ENST00000629136 MYH1P12882 1939 aa13.26□□□□□ -0.29
CHD2-217ENST00000629136 BTDP43251 543 aa13.26□□□□□ -0.29
CHD2-217ENST00000629136 TCP10Q12799 353 aa13.26□□□□□ -0.29
CHD2-217ENST00000629136 SPTY2D1Q68D10 685 aaPredicted RBP13.26□□□□□ -0.29
CHD2-217ENST00000629136 ERICH6Q7L0X2 663 aa13.26□□□□□ -0.29
CHD2-217ENST00000629136 NSUN4Q96CB9 384 aaKnown RBP13.26□□□□□ -0.29
CHD2-217ENST00000629136 FAM163AQ96GL9 167 aaPredicted RBP13.26□□□□□ -0.29
CHD2-217ENST00000629136 WRNIP1Q96S55 665 aa13.26□□□□□ -0.29
CHD2-217ENST00000629136 USP40Q9NVE5 1235 aa13.26□□□□□ -0.29
CHD2-217ENST00000629136 DBNLQ9UJU6 430 aaKnown RBP13.26□□□□□ -0.29
CHD2-217ENST00000629136 DDX19BQ9UMR2 479 aa13.26□□□□□ -0.29
CHD2-217ENST00000629136 EXOC6BQ9Y2D4 811 aa13.26□□□□□ -0.29
CHD2-217ENST00000629136 SNCAIPQ9Y6H5 919 aa13.26□□□□□ -0.29
CHD2-217ENST00000629136 UQCRFS1P1P0C7P4 283 aa13.25□□□□□ -0.29
CHD2-217ENST00000629136 MAP3K9P80192 1104 aa13.25□□□□□ -0.29
CHD2-217ENST00000629136 DGKZQ13574 1117 aa13.25□□□□□ -0.29
CHD2-217ENST00000629136 TTC39AQ5SRH9 613 aa13.25□□□□□ -0.29
CHD2-217ENST00000629136 C20orf194Q5TEA3 1177 aa13.25□□□□□ -0.29
CHD2-217ENST00000629136 TBC1D9Q6ZT07 1266 aa13.25□□□□□ -0.29
CHD2-217ENST00000629136 IFNL1Q8IU54 200 aa13.25□□□□□ -0.29
CHD2-217ENST00000629136 ZFPM1Q8IX07 1006 aa13.25□□□□□ -0.29
CHD2-217ENST00000629136 ZNF296Q8WUU4 475 aaPredicted RBP13.25□□□□□ -0.29
CHD2-217ENST00000629136 EAF2Q96CJ1 260 aaPredicted RBP13.25□□□□□ -0.29
CHD2-217ENST00000629136 IDI2Q9BXS1 227 aa13.25□□□□□ -0.29
CHD2-217ENST00000629136 R3HDMLQ9H3Y0 253 aa13.25□□□□□ -0.29
CHD2-217ENST00000629136 DDX4Q9NQI0 724 aaKnown RBP13.25□□□□□ -0.29
CHD2-217ENST00000629136 ZBTB40Q9NUA8 1239 aa13.25□□□□□ -0.29
CHD2-217ENST00000629136 NAV1Q8NEY1 1877 aa13.25□□□□□ -0.29
CHD2-217ENST00000629136 COL2A1P02458 1487 aaPredicted RBP13.24□□□□□ -0.29
CHD2-217ENST00000629136 GPR75-ASB3A0A0A6YYF3 556 aa13.24□□□□□ -0.29
CHD2-217ENST00000629136 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
CHD2-217ENST00000629136 SPDYE5A6NIY4 337 aa13.24□□□□□ -0.29
CHD2-217ENST00000629136 WDHD1O75717 1129 aaPredicted RBP13.24□□□□□ -0.29
CHD2-217ENST00000629136 RGS3P49796 1198 aa13.24□□□□□ -0.29
CHD2-217ENST00000629136 INHBEP58166 350 aa13.24□□□□□ -0.29
CHD2-217ENST00000629136 RHBDL3P58872 404 aa13.24□□□□□ -0.29
CHD2-217ENST00000629136 NOM1Q5C9Z4 860 aaKnown RBP13.24□□□□□ -0.29
CHD2-217ENST00000629136 DCAF15Q66K64 600 aa13.24□□□□□ -0.29
CHD2-217ENST00000629136 MIGA2Q7L4E1 593 aa13.24□□□□□ -0.29
CHD2-217ENST00000629136 SLF2Q8IX21 1173 aa13.24□□□□□ -0.29
CHD2-217ENST00000629136 SIRT2Q8IXJ6 389 aa13.24□□□□□ -0.29
CHD2-217ENST00000629136 ZKSCAN4Q969J2 545 aaPredicted RBP13.24□□□□□ -0.29
CHD2-217ENST00000629136 HOOK2Q96ED9 719 aa13.24□□□□□ -0.29
CHD2-217ENST00000629136 MS4A4AQ96JQ5 239 aa13.24□□□□□ -0.29
CHD2-217ENST00000629136 ZNF512BQ96KM6 892 aaPredicted RBP13.24□□□□□ -0.29
CHD2-217ENST00000629136 PTPN18Q99952 460 aa13.24□□□□□ -0.29
CHD2-217ENST00000629136 CCDC8Q9H0W5 538 aaPredicted RBP13.24□□□□□ -0.29
CHD2-217ENST00000629136 CSADQ9Y600 493 aa13.24□□□□□ -0.29
CHD2-217ENST00000629136 LOC285556D6RIA3 1793 aa13.23□□□□□ -0.29
CHD2-217ENST00000629136 GPR25O00155 361 aa13.23□□□□□ -0.29
CHD2-217ENST00000629136 ENTPD3O75355 529 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms